RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	SRL4	Q03085	281 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	SPG3	Q04398	127 aa	Predicted RBP	4.21	□□□□□ -1.74
YDC1	YPL087W	DYN3	Q04949	312 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	GMC2	Q06201	188 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	NDL1	Q06568	189 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	YLR413W	Q06689	675 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	COS7	Q07788	383 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	YLR012C	Q07927	99 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	TIM18	Q08749	192 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	VIK1	Q12045	647 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	GET4	Q12125	312 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	MDY2	Q12285	212 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	FAR1	P21268	830 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	DBR1	P24309	405 aa	Known RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	TIP1	P27654	210 aa	Predicted RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	BRF1	P29056	596 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	RML2	P32611	393 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	STB6	P36085	766 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	YKR015C	P36111	568 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	MIX23	P38162	196 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	CYC2	P38909	366 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	MST28	P39552	234 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	YER034W	P40022	185 aa	Known RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	BTT1	P40314	149 aa	Predicted RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	YFL012W	P43580	148 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	BUD13	P46947	266 aa	Predicted RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	YJR011C	P47086	261 aa	Predicted RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	ASN2	P49090	572 aa	Known RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	BOL2	P53082	120 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	GET1	P53192	235 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	KAP120	Q02932	1032 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	YMR155W	Q03795	547 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	RPN9	Q04062	393 aa	Known RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	PBA1	Q05778	276 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	SSQ1	Q05931	657 aa	Predicted RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	SWC7	Q06707	132 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	THP3	Q12049	470 aa	Known RBP	4.2	□□□□□ -1.74
YDC1	YPL087W	IES3	Q12345	250 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	YER078W-A	Q3E7A2	54 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	AFI1	Q99222	893 aa		4.2	□□□□□ -1.74
YDC1	YPL087W	ATP6	P00854	259 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	FBA1	P14540	359 aa	Known RBP	4.19	□□□□□ -1.74
YDC1	YPL087W	IMP3	P32899	183 aa	Predicted RBP	4.19	□□□□□ -1.74
YDC1	YPL087W	SGE1	P33335	543 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	MRPL40	P36534	297 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	YBR241C	P38142	488 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	RIB5	P38145	238 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	IST2	P38250	946 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	SRP72	P38688	640 aa	Known RBP	4.19	□□□□□ -1.74
YDC1	YPL087W	FAA2	P39518	744 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	SEO1	P39709	593 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	GCN20	P43535	752 aa	Known RBP	4.19	□□□□□ -1.74
YDC1	YPL087W	RPS0B	P46654	252 aa	Known RBP	4.19	□□□□□ -1.74
YDC1	YPL087W	NAS6	P50086	228 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	SKO1	Q02100	647 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	HOT1	Q03213	719 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	YMR181C	Q03231	154 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	CSN9	Q03981	162 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	ATG38	Q05789	226 aa	Known RBP	4.19	□□□□□ -1.74
YDC1	YPL087W	YMR030W-A	Q3E760	96 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	YOL159C-A	Q3E769	90 aa		4.19	□□□□□ -1.74
YDC1	YPL087W	ACC1	Q00955	2233 aa	Known RBP	4.19	□□□□□ -1.74
YDC1	YPL087W	THP2	O13539	261 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	BCY1	P07278	416 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YDC1	YPL087W	RVS161	P25343	265 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	CSE1	P33307	960 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	SKT5	P34226	696 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	PIM1	P36775	1133 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	SLX1	P38324	304 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	YDR089W	P38966	869 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	LYS1	P38998	373 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected
YDC1	YPL087W	THO1	P40040	218 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	SPG5	P42933	373 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	WWM1	P43582	211 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	RBL2	P48606	106 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	PRP24	P49960	444 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	SHY1	P53266	389 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	GOR1	P53839	350 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	YNL095C	P53932	642 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	REX2	P54964	269 aa	Known RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	PRP38	Q00723	242 aa	Predicted RBP	4.18	□□□□□ -1.74
YDC1	YPL087W	RMI1	Q02685	241 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	MED2	Q12124	431 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	VAM3	Q12241	283 aa		4.18	□□□□□ -1.74
YDC1	YPL087W	COX5A	P00424	153 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	NSP1	P14907	823 aa	Known RBP	4.17	□□□□□ -1.74
YDC1	YPL087W	CPR4	P25334	318 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	BUB2	P26448	306 aa	Predicted RBP	4.17	□□□□□ -1.74
YDC1	YPL087W	RPS5	P26783	225 aa	Known RBP	4.17	□□□□□ -1.74
YDC1	YPL087W	RPS1A	P33442	255 aa	Known RBP	4.17	□□□□□ -1.74
YDC1	YPL087W	YKL097C	P34245	136 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	VPS21	P36017	210 aa	Known RBP	4.17	□□□□□ -1.74
YDC1	YPL087W	YHR045W	P38775	560 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	COA1	P40452	197 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	YIL067C	P40514	678 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	SAS2	P40963	338 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	UFE1	P41834	346 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	YGR210C	P42942	411 aa		4.17	□□□□□ -1.74
YDC1	YPL087W	AGP3	P43548	558 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms