RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeast

Gene SGF11, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGF11	YPL047W	LSG1	P53145	640 aa	Known RBP	0.71	□□□□□ -2.3
SGF11	YPL047W	LST7	P53237	242 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	YNL095C	P53932	642 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	ACT1	P60010	375 aa	Known RBP	0.71	□□□□□ -2.3
SGF11	YPL047W	INP1	Q03694	420 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	YDR114C	Q04597	100 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	DXO1	Q06349	442 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	CDD1	Q06549	142 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	YOL075C	Q08234	1294 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	BUD21	Q08492	214 aa	Predicted RBP	0.71	□□□□□ -2.3
SGF11	YPL047W	FEX1	Q08913	375 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	FEX2	Q08991	375 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	TAF10	Q12030	206 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	GPM3	Q12326	303 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	ISA2	Q12425	185 aa		0.71	□□□□□ -2.3
SGF11	YPL047W	RPS14A	P06367	137 aa	Known RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	ADH3	P07246	375 aa	Known RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	RPS16A	P0CX51	143 aa	Known RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	RPS16B	P0CX52	143 aa	Known RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	DAP2	P18962	818 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	ERG9	P29704	444 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	MSK1	P32048	576 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	VPH2	P32341	215 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	CLB6	P32943	380 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	CSE1	P33307	960 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	BUD2	P33314	1104 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	PCH2	P38126	564 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	SMF2	P38778	549 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	ASP1	P38986	381 aa	Predicted RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	RPS14B	P39516	138 aa	Known RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	SLM1	P40485	686 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	YNL320W	P42840	284 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	EPL1	P43572	832 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	SDS23	P53172	527 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	CAX4	P53223	239 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	YNL040W	P53960	456 aa	Predicted RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	VPS9	P54787	451 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	CGI121	Q03705	181 aa	Known RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	YMR244W	Q04018	355 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	SPE3	Q12074	293 aa	Known RBP	0.7	□□□□□ -2.3
SGF11	YPL047W	RPN6	Q12377	434 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	MRX4	Q12467	430 aa		0.7	□□□□□ -2.3
SGF11	YPL047W	YOL163W	P0CF20	169 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	ARF2	P19146	181 aa	Known RBP	0.69	□□□□□ -2.3
SGF11	YPL047W	DBR1	P24309	405 aa	Known RBP	0.69	□□□□□ -2.3
SGF11	YPL047W	PSO2	P30620	661 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	YER084W	P40057	128 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	LCB2	P40970	561 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	PMT4	P46971	762 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	YML6	P51998	286 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	MLC1	P53141	149 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	FMP48	P53233	369 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	CIK1	Q01649	594 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	CSM3	Q04659	317 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	YFH1	Q07540	174 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	IES3	Q12345	250 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	ERP3	Q12403	225 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	PRM4	Q12498	284 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	FSH3	Q99369	266 aa		0.69	□□□□□ -2.3
SGF11	YPL047W	DCC1	P25559	380 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	MRPS5	P33759	307 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	PEX32	P38292	413 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	GDT1	P38301	280 aa	Predicted RBP	0.68	□□□□□ -2.3
SGF11	YPL047W	YHL044W	P38727	235 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	YHR122W	P38829	231 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	ATG7	P38862	630 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	DSE1	P40077	573 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	ECO1	P43605	281 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	BAT2	P47176	376 aa	Known RBP	0.68	□□□□□ -2.3
SGF11	YPL047W	UFD1	P53044	361 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	YGL118C	P53132	145 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	MPS2	P53159	387 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	TPC1	P53257	314 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	SUB1	P54000	292 aa	Known RBP	0.68	□□□□□ -2.3
SGF11	YPL047W	DTD1	Q07648	150 aa	Known RBP	0.68	□□□□□ -2.3
SGF11	YPL047W	PEX27	Q08580	376 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	TFC7	Q12415	435 aa		0.68	□□□□□ -2.3
SGF11	YPL047W	AIM45	Q12480	344 aa	Known RBP	0.68	□□□□□ -2.3
SGF11	YPL047W	CKI1	P20485	582 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	SWE1	P32944	819 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	CAB3	P36076	571 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	YMR134W	P40207	237 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	HIT1	P46973	164 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	SMP3	Q04174	516 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	GYL1	Q04322	720 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	AIM33	Q04516	312 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	YPL245W	Q12179	454 aa	Known RBP	0.67	□□□□□ -2.3
SGF11	YPL047W	MHP1	P43638	1398 aa		0.67	□□□□□ -2.3
SGF11	YPL047W	RPL26A	P05743	127 aa	Known RBP	0.66	□□□□□ -2.3
SGF11	YPL047W	ZWF1	P11412	505 aa	Known RBP	0.66	□□□□□ -2.3
SGF11	YPL047W	THR4	P16120	514 aa	Known RBP	0.66	□□□□□ -2.3
SGF11	YPL047W	YEL043W	P32618	956 aa		0.66	□□□□□ -2.3
SGF11	YPL047W	MMS21	P38632	267 aa		0.66	□□□□□ -2.3
SGF11	YPL047W	MED6	P38782	295 aa		0.66	□□□□□ -2.3
SGF11	YPL047W	LIF1	P53150	421 aa		0.66	□□□□□ -2.3
SGF11	YPL047W	RPL26B	P53221	127 aa	Known RBP	0.66	□□□□□ -2.3
SGF11	YPL047W	SYF2	P53277	215 aa	Predicted RBP	0.66	□□□□□ -2.3
SGF11	YPL047W	MRX9	Q07349	420 aa	Known RBP	0.66	□□□□□ -2.3
SGF11	YPL047W	APC5	Q08683	685 aa		0.66	□□□□□ -2.3
SGF11	YPL047W	VPS68	Q12016	184 aa		0.66	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms