RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeast

Gene RRP40, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP40	YOL142W	YLR053C	Q12026	108 aa		4.22	□□□□□ -1.73
RRP40	YOL142W	RIP1	P08067	215 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	YKR104W	P0CE69	306 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	TIP1	P27654	210 aa	Predicted RBP	4.21	□□□□□ -1.74
RRP40	YOL142W	ERG3	P32353	365 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	PHA2	P32452	334 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	APE2	P32454	952 aa	Known RBP	4.21	□□□□□ -1.74
RRP40	YOL142W	TFB1	P32776	642 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	PRP18	P33411	251 aa	Predicted RBP	4.21	□□□□□ -1.74
RRP40	YOL142W	TIP20	P33891	701 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	YHR182W	P38870	785 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	LIA1	P47120	325 aa	Known RBP	4.21	□□□□□ -1.74
RRP40	YOL142W	SSN8	P47821	323 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	TIS11	P47977	285 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	BOL2	P53082	120 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	RCF2	P53721	224 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	TRM12	Q04235	462 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	FAR8	Q05040	523 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	YPR022C	Q12139	1133 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	YOR012W	Q12351	137 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	NCA2	Q12374	616 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	GTT2	Q12390	233 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	RGS2	Q99188	309 aa		4.21	□□□□□ -1.74
RRP40	YOL142W	CDC31	P06704	161 aa	Known RBP	4.2	□□□□□ -1.74
RRP40	YOL142W	CPA1	P07258	411 aa	Known RBP	4.2	□□□□□ -1.74
RRP40	YOL142W	RPI1	P23250	407 aa	Known RBP	4.2	□□□□□ -1.74
RRP40	YOL142W	SNT1	P25357	1226 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	ARO2	P28777	376 aa	Known RBP	4.2	□□□□□ -1.74
RRP40	YOL142W	SDH3	P33421	198 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	UTH1	P36135	365 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	MRPL4	P36517	319 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	WWM1	P43582	211 aa	Known RBP	4.2	□□□□□ -1.74
RRP40	YOL142W	YFR018C	P43599	363 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	GCD14	P46959	383 aa	Predicted RBP	4.2	□□□□□ -1.74
RRP40	YOL142W	ECM27	P47144	725 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	YIF1	P53845	314 aa	Known RBP	4.2	□□□□□ -1.74
RRP40	YOL142W	SWS2	P53937	143 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	GOT1	Q03554	138 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	CCE1	Q03702	353 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	TRM82	Q03774	444 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	CSN9	Q03981	162 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	EMI1	Q04406	187 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	MRPL35	Q06678	367 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	PLB3	Q08108	686 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	YOL019W	Q08157	551 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	MDY2	Q12285	212 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	YPL247C	Q12523	523 aa		4.2	□□□□□ -1.74
RRP40	YOL142W	COX3	P00420	269 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	POL30	P15873	258 aa	Known RBP	4.19	□□□□□ -1.74
RRP40	YOL142W	SCL1	P21243	252 aa	Known RBP	4.19	□□□□□ -1.74
RRP40	YOL142W	SPS22	P25380	463 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	ITR1	P30605	584 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	YEL045C	P32616	141 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	PTM1	P32857	523 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	YPT52	P36018	234 aa	Known RBP	4.19	□□□□□ -1.74
RRP40	YOL142W	MRPL37	P36532	105 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	SOL2	P37262	315 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	RIB5	P38145	238 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	PHO89	P38361	574 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	YHR045W	P38775	560 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	YEL073C	P39974	107 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	PRE5	P40302	234 aa	Known RBP	4.19	□□□□□ -1.74
RRP40	YOL142W	REE1	P40893	198 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	SAS2	P40963	338 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	BIR1	P47134	954 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	AIF1	P52923	378 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	ZRG17	P53735	605 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	ARX1	Q03862	593 aa	Known RBP	4.19	□□□□□ -1.74
RRP40	YOL142W	TIM18	Q08749	192 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	APC9	Q12107	265 aa		4.19	□□□□□ -1.74
RRP40	YOL142W	RUD3	Q12234	484 aa	Known RBP	4.19	□□□□□ -1.74
RRP40	YOL142W	SPR1	P32603	445 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	HCS1	P34243	683 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	EFM1	P38732	585 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	LIN1	P38852	340 aa	Predicted RBP	4.18	□□□□□ -1.74
RRP40	YOL142W	PTH1	P38876	190 aa	Known RBP	4.18	□□□□□ -1.74
RRP40	YOL142W	YDR089W	P38966	869 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	YHB1	P39676	399 aa	Known RBP	4.18	□□□□□ -1.74
RRP40	YOL142W	LSM5	P40089	93 aa	Known RBP	4.18	□□□□□ -1.74
RRP40	YOL142W	MEP1	P40260	492 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	UTP18	P40362	594 aa	Predicted RBP	4.18	□□□□□ -1.74
RRP40	YOL142W	DSN1	P40568	576 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	NCA3	P46955	337 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	CLD1	P53264	445 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	RMI1	Q02685	241 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	TAF12	Q03761	539 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	YMR155W	Q03795	547 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	PST1	Q12355	444 aa		4.18	□□□□□ -1.74
RRP40	YOL142W	NOT5	Q12514	560 aa	Predicted RBP	4.18	□□□□□ -1.74
RRP40	YOL142W	FAS1	P07149	2051 aa	Known RBP	4.18	□□□□□ -1.74
RRP40	YOL142W	CDC21	P06785	304 aa		4.17	□□□□□ -1.74
RRP40	YOL142W	CLB3	P24870	427 aa		4.17	□□□□□ -1.74
RRP40	YOL142W	YCR090C	P25654	182 aa	Known RBP	4.17	□□□□□ -1.74
RRP40	YOL142W	SKT5	P34226	696 aa		4.17	□□□□□ -1.74
RRP40	YOL142W	SWD3	P38123	315 aa		4.17	□□□□□ -1.74
RRP40	YOL142W	DED81	P38707	554 aa	Known RBP	4.17	□□□□□ -1.74
RRP40	YOL142W	FAA2	P39518	744 aa		4.17	□□□□□ -1.74
RRP40	YOL142W	NPT1	P39683	429 aa	Known RBP	4.17	□□□□□ -1.74
RRP40	YOL142W	COA1	P40452	197 aa		4.17	□□□□□ -1.74
RRP40	YOL142W	PRM5	P40476	318 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms