RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	RSM23	Q01163	450 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	YPQ1	Q12010	308 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	TAF10	Q12030	206 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	TPO4	Q12256	659 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	YOP1	Q12402	180 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	AIM45	Q12480	344 aa	Known RBP	2.32	□□□□□ -2.04
TOP2	YNL088W	YIR021W-A	Q3E739	70 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	SDH2	P21801	266 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	YSP3	P25036	478 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	IFM1	P25038	676 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	SUA7	P29055	345 aa	Predicted RBP	2.32	□□□□□ -2.04
TOP2	YNL088W	OCH1	P31755	480 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	PRX1	P34227	261 aa	Known RBP	2.32	□□□□□ -2.04
TOP2	YNL088W	VHC1	P38329	1120 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	LYS12	P40495	371 aa	Known RBP	2.32	□□□□□ -2.04
TOP2	YNL088W	FAR3	P46671	204 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	YJL016W	P47072	561 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	GPI14	P47088	403 aa	Known RBP	2.32	□□□□□ -2.04
TOP2	YNL088W	AZR1	P50080	613 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	MGA1	P53050	456 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	COS12	P53053	380 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	COX18	P53239	316 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	ASR1	Q06834	288 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	ALG6	Q12001	544 aa	Known RBP	2.32	□□□□□ -2.04
TOP2	YNL088W	LCB4	Q12246	624 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	NCA2	Q12374	616 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	PSF1	Q12488	208 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	FSH3	Q99369	266 aa		2.32	□□□□□ -2.04
TOP2	YNL088W	DRS2	P39524	1355 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	ADE5,7	P07244	802 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	CNB1	P25296	175 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	ACH1	P32316	526 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	BNA4	P38169	460 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	LEU5	P38702	357 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YHR078W	P38799	552 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	COG3	P40094	801 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YNL195C	P40168	261 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	MMS2	P53152	137 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YGR017W	P53210	297 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	NRK1	P53915	240 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	SIZ1	Q04195	904 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	PRM6	Q04705	352 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YMR253C	Q04835	414 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	ASM4	Q05166	528 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	FAR10	Q06001	478 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	HNT3	Q08702	217 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	MET5	P47169	1442 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	AAC1	P04710	309 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	CHO1	P08456	276 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	RFA2	P26754	273 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	PHA2	P32452	334 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YEF1	P32622	495 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	RGT1	P32862	1170 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	SPC34	P36131	295 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.31	□□□□□ -2.04	not detected
TOP2	YNL088W	AIM2	P39721	246 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	POP1	P41812	875 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	BIO4	P53630	237 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	CSN9	Q03981	162 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YMR087W	Q04299	284 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	HOF1	Q05080	669 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	CYK3	Q07533	885 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	ELG1	Q12050	791 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	MRX4	Q12467	430 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	VMA5	P31412	392 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	CYS4	P32582	507 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	THI80	P35202	319 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	RRP4	P38792	359 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	ELO1	P39540	310 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	SMP3	Q04174	516 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	DLT1	Q04216	342 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	SDH7	Q04401	133 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	GRX8	Q05926	109 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	ALE1	Q08548	619 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YOR214C	Q12282	236 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	FRE7	Q12333	620 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	SNU23	Q12368	194 aa	Predicted RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	TRM13	Q12383	476 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	CTA1	P15202	515 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	SCL1	P21243	252 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	KIN82	P25341	720 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	PUP3	P25451	205 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	2.31	□□□□□ -2.04	not detected
TOP2	YNL088W	INO2	P26798	304 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	GDA1	P32621	518 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	CAT2	P32796	670 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	RCK1	P38622	512 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	TIF11	P38912	153 aa	Known RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	EXO1	P39875	702 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	DDI1	P40087	428 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	PTR3	P43606	678 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	CTK3	P46963	296 aa	Predicted RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	YJR011C	P47086	261 aa	Predicted RBP	2.31	□□□□□ -2.04
TOP2	YNL088W	PAC10	P48363	199 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	BOR1	P53838	576 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	UBC7	Q02159	165 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YPL113C	Q02961	396 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	NHP10	Q03435	203 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	PLB2	Q03674	706 aa		2.31	□□□□□ -2.04
TOP2	YNL088W	YMR010W	Q03687	405 aa		2.31	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms