RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C LDB16P25587 256 aa3.76□□□□□ -1.81
CUS1YMR240C RPL5P26321 297 aaKnown RBP3.76□□□□□ -1.81
CUS1YMR240C RPC25P35718 212 aa3.76□□□□□ -1.81
CUS1YMR240C SHE1P38200 338 aa3.76□□□□□ -1.81
CUS1YMR240C BMT2P38278 337 aa3.76□□□□□ -1.81
CUS1YMR240C VPS45P38932 577 aa3.76□□□□□ -1.81
CUS1YMR240C IGD1P43598 195 aa3.76□□□□□ -1.81
CUS1YMR240C GCD14P46959 383 aaPredicted RBP3.76□□□□□ -1.81
CUS1YMR240C YJR054WP47114 497 aa3.76□□□□□ -1.81
CUS1YMR240C SHE10P53075 577 aa3.76□□□□□ -1.81
CUS1YMR240C YGR015CP53208 328 aa3.76□□□□□ -1.81
CUS1YMR240C OKP1P53298 406 aa3.76□□□□□ -1.81
CUS1YMR240C VTI1Q04338 217 aa3.76□□□□□ -1.81
CUS1YMR240C TAF10Q12030 206 aa3.76□□□□□ -1.81
CUS1YMR240C REP1P03871 373 aa3.75□□□□□ -1.81
CUS1YMR240C RPS14AP06367 137 aaKnown RBP3.75□□□□□ -1.81
CUS1YMR240C CTA1P15202 515 aa3.75□□□□□ -1.81
CUS1YMR240C OM45P16547 393 aa3.75□□□□□ -1.81
CUS1YMR240C RAD23P32628 398 aaKnown RBP3.75□□□□□ -1.81
CUS1YMR240C GPI18P38211 433 aa3.75□□□□□ -1.81
CUS1YMR240C RPS14BP39516 138 aaKnown RBP3.75□□□□□ -1.81
CUS1YMR240C YFL040WP43562 540 aa3.75□□□□□ -1.81
CUS1YMR240C CDH1P53197 566 aa3.75□□□□□ -1.81
CUS1YMR240C YLR012CQ07927 99 aa3.75□□□□□ -1.81
CUS1YMR240C RPN8Q08723 338 aaKnown RBP3.75□□□□□ -1.81
CUS1YMR240C COX4P04037 155 aa3.74□□□□□ -1.81
CUS1YMR240C URA10P30402 227 aa3.74□□□□□ -1.81
CUS1YMR240C PPQ1P32945 549 aa3.74□□□□□ -1.81
CUS1YMR240C DTR1P38125 572 aa3.74□□□□□ -1.81
CUS1YMR240C YHR035WP38769 630 aa3.74□□□□□ -1.81
CUS1YMR240C CHL4P38907 458 aa3.74□□□□□ -1.81
CUS1YMR240C PMT4P46971 762 aa3.74□□□□□ -1.81
CUS1YMR240C COX16P47081 118 aa3.74□□□□□ -1.81
CUS1YMR240C BIO3P50277 480 aa3.74□□□□□ -1.81
CUS1YMR240C RNH201P53942 307 aa3.74□□□□□ -1.81
CUS1YMR240C IRC4Q03036 179 aa3.74□□□□□ -1.81
CUS1YMR240C SCS7Q03529 384 aa3.74□□□□□ -1.81
CUS1YMR240C FAR10Q06001 478 aa3.74□□□□□ -1.81
CUS1YMR240C RDL2Q08742 149 aaKnown RBP3.74□□□□□ -1.81
CUS1YMR240C SIA1Q12212 622 aa3.74□□□□□ -1.81
CUS1YMR240C LDB17Q12342 491 aa3.74□□□□□ -1.81
CUS1YMR240C MRPL23Q12487 163 aaPredicted RBP3.74□□□□□ -1.81
CUS1YMR240C IES6P32617 166 aa3.73□□□□□ -1.81
CUS1YMR240C YBR241CP38142 488 aa3.73□□□□□ -1.81
CUS1YMR240C SHE3P38272 425 aaKnown RBP3.73□□□□□ -1.81
CUS1YMR240C WSC4P38739 605 aa3.73□□□□□ -1.81
CUS1YMR240C GTO1P48239 356 aa3.73□□□□□ -1.81
CUS1YMR240C BIO4P53630 237 aa3.73□□□□□ -1.81
CUS1YMR240C YMR111CQ04461 462 aaPredicted RBP3.73□□□□□ -1.81
CUS1YMR240C DTD1Q07648 150 aaKnown RBP3.73□□□□□ -1.81
CUS1YMR240C RRP36Q12481 300 aaPredicted RBP3.73□□□□□ -1.81
CUS1YMR240C PRM4Q12498 284 aa3.73□□□□□ -1.81
CUS1YMR240C RPL21BQ12672 160 aaKnown RBP3.73□□□□□ -1.81
CUS1YMR240C HSP26P15992 214 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
CUS1YMR240C MEK1P24719 497 aaPredicted RBP3.72□□□□□ -1.81
CUS1YMR240C ZRT1P32804 376 aa3.72□□□□□ -1.81
CUS1YMR240C RIB7P33312 244 aa3.72□□□□□ -1.81
CUS1YMR240C KTI12P34253 313 aaKnown RBP3.72□□□□□ -1.81
CUS1YMR240C YKL071WP36086 256 aa3.72□□□□□ -1.81
CUS1YMR240C TIS11P47977 285 aa3.72□□□□□ -1.81
CUS1YMR240C YNL260CP53846 198 aa3.72□□□□□ -1.81
CUS1YMR240C YPL080CQ02826 108 aa3.72□□□□□ -1.81
CUS1YMR240C TSA2Q04120 196 aa3.72□□□□□ -1.81
CUS1YMR240C YDR115WQ04598 105 aa3.72□□□□□ -1.81
CUS1YMR240C BCP1Q06338 283 aa3.72□□□□□ -1.81
CUS1YMR240C MRX9Q07349 420 aaKnown RBP3.72□□□□□ -1.81
CUS1YMR240C PDC2P32896 925 aa3.71□□□□□ -1.81
CUS1YMR240C YKL070WP36087 169 aa3.71□□□□□ -1.81
CUS1YMR240C YMR262WP38430 313 aa3.71□□□□□ -1.81
CUS1YMR240C PEX18P38855 283 aa3.71□□□□□ -1.81
CUS1YMR240C PEX22P39718 180 aa3.71□□□□□ -1.81
CUS1YMR240C DSE1P40077 573 aa3.71□□□□□ -1.81
CUS1YMR240C YPS5P53057 165 aa3.71□□□□□ -1.81
CUS1YMR240C HAL1Q01766 294 aa3.71□□□□□ -1.81
CUS1YMR240C PBP4Q07362 185 aaKnown RBP3.71□□□□□ -1.81
CUS1YMR240C YOR376WQ08900 122 aa3.71□□□□□ -1.81
CUS1YMR240C FOL3Q12676 427 aaPredicted RBP3.71□□□□□ -1.81
CUS1YMR240C RAD7P06779 565 aa3.7□□□□□ -1.82
CUS1YMR240C PCL1P24867 279 aa3.7□□□□□ -1.82
CUS1YMR240C ECT1P33412 323 aa3.7□□□□□ -1.82
CUS1YMR240C SDS24P38314 527 aa3.7□□□□□ -1.82
CUS1YMR240C STB1P42845 420 aa3.7□□□□□ -1.82
CUS1YMR240C PGU1P47180 361 aa3.7□□□□□ -1.82
CUS1YMR240C YGL185CP53100 379 aa3.7□□□□□ -1.82
CUS1YMR240C MND1P53102 219 aa3.7□□□□□ -1.82
CUS1YMR240C RPN14P53196 417 aa3.7□□□□□ -1.82
CUS1YMR240C GIS2P53849 153 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
CUS1YMR240C MRPS16Q02608 121 aa3.7□□□□□ -1.82
CUS1YMR240C RMI1Q02685 241 aa3.7□□□□□ -1.82
CUS1YMR240C APC9Q12107 265 aa3.7□□□□□ -1.82
CUS1YMR240C SSA3P09435 649 aaKnown RBP3.7□□□□□ -1.82
CUS1YMR240C GPI12P23797 304 aa3.7□□□□□ -1.82
CUS1YMR240C SWD2P36104 329 aaPredicted RBP3.7□□□□□ -1.82
CUS1YMR240C EFM1P38732 585 aa3.7□□□□□ -1.82
CUS1YMR240C MRX11Q03079 207 aa3.7□□□□□ -1.82
CUS1YMR240C SNX41Q04053 625 aa3.7□□□□□ -1.82
CUS1YMR240C YPQ1Q12010 308 aa3.7□□□□□ -1.82
CUS1YMR240C MHP1P43638 1398 aa3.69□□□□□ -1.82
CUS1YMR240C ASP3-2P0CX77 362 aa3.69□□□□□ -1.82
CUS1YMR240C ASP3-3P0CX78 362 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms