RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W MED11Q99278 115 aa13.66□□□□□ -0.22
SCJ1YMR214W ADE5,7P07244 802 aaKnown RBP13.65□□□□□ -0.22
SCJ1YMR214W ERD2P18414 219 aa13.65□□□□□ -0.22
SCJ1YMR214W MRPS28P21771 286 aa13.65□□□□□ -0.22
SCJ1YMR214W RTC2P38279 296 aa13.65□□□□□ -0.22
SCJ1YMR214W CHA4P43634 648 aa13.65□□□□□ -0.22
SCJ1YMR214W SHE4P51534 789 aa13.65□□□□□ -0.22
SCJ1YMR214W COS1P53822 381 aa13.65□□□□□ -0.22
SCJ1YMR214W URC2Q04411 772 aa13.65□□□□□ -0.22
SCJ1YMR214W PAL1Q05518 499 aaKnown RBP13.65□□□□□ -0.22
SCJ1YMR214W ATG17Q06410 417 aa13.65□□□□□ -0.22
SCJ1YMR214W SPC3Q12133 184 aa13.65□□□□□ -0.22
SCJ1YMR214W DET1Q99288 334 aaKnown RBP13.65□□□□□ -0.22
SCJ1YMR214W VCX1Q99385 411 aa13.65□□□□□ -0.22
SCJ1YMR214W PGU1P47180 361 aa13.64□□□□□ -0.23
SCJ1YMR214W EXG2P52911 562 aa13.64□□□□□ -0.23
SCJ1YMR214W BUD9P53226 547 aa13.64□□□□□ -0.23
SCJ1YMR214W NUP116Q02630 1113 aa13.64□□□□□ -0.23
SCJ1YMR214W ELP6Q04868 273 aa13.64□□□□□ -0.23
SCJ1YMR214W DCR2Q05924 578 aa13.64□□□□□ -0.23
SCJ1YMR214W HDA2Q06629 674 aa13.64□□□□□ -0.23
SCJ1YMR214W DFG16Q99234 619 aa13.64□□□□□ -0.23
SCJ1YMR214W FLP1P03870 423 aa13.63□□□□□ -0.23
SCJ1YMR214W CDC36P06100 191 aaPredicted RBP13.63□□□□□ -0.23
SCJ1YMR214W YHR214C-DP0CX93 97 aa13.63□□□□□ -0.23
SCJ1YMR214W SNF6P18888 332 aa13.63□□□□□ -0.23
SCJ1YMR214W HSP150P32478 413 aa13.63□□□□□ -0.23
SCJ1YMR214W MTR2P34232 184 aaKnown RBP13.63□□□□□ -0.23
SCJ1YMR214W ECM15P35195 104 aa13.63□□□□□ -0.23
SCJ1YMR214W NSG1P38837 291 aa13.63□□□□□ -0.23
SCJ1YMR214W IPT1P38954 527 aa13.63□□□□□ -0.23
SCJ1YMR214W CUZ1P53899 274 aa13.63□□□□□ -0.23
SCJ1YMR214W ASI1P54074 624 aa13.63□□□□□ -0.23
SCJ1YMR214W YDR179W-AQ03983 463 aa13.63□□□□□ -0.23
SCJ1YMR214W GSH2Q08220 491 aa13.63□□□□□ -0.23
SCJ1YMR214W YKL077WP36081 392 aa13.62□□□□□ -0.23
SCJ1YMR214W RRP4P38792 359 aaKnown RBP13.62□□□□□ -0.23
SCJ1YMR214W KRE29P40026 464 aa13.62□□□□□ -0.23
SCJ1YMR214W YFR054CP43622 192 aa13.62□□□□□ -0.23
SCJ1YMR214W LSG1P53145 640 aaKnown RBP13.62□□□□□ -0.23
SCJ1YMR214W RBG2P53295 368 aaKnown RBP13.62□□□□□ -0.23
SCJ1YMR214W DMA2P53924 522 aa13.62□□□□□ -0.23
SCJ1YMR214W TIM10P87108 93 aa13.62□□□□□ -0.23
SCJ1YMR214W SEC13Q04491 297 aaKnown RBP13.62□□□□□ -0.23
SCJ1YMR214W EMG1Q06287 252 aaKnown RBP13.62□□□□□ -0.23
SCJ1YMR214W SIA1Q12212 622 aa13.62□□□□□ -0.23
SCJ1YMR214W TRM10Q12400 293 aa13.62□□□□□ -0.23
SCJ1YMR214W NCP1P16603 691 aaKnown RBP13.61□□□□□ -0.23
SCJ1YMR214W OAC1P32332 324 aa13.61□□□□□ -0.23
SCJ1YMR214W MDL1P33310 695 aa13.61□□□□□ -0.23
SCJ1YMR214W YLF2P38746 405 aa13.61□□□□□ -0.23
SCJ1YMR214W ECL1P48235 211 aa13.61□□□□□ -0.23
SCJ1YMR214W PLB2Q03674 706 aa13.61□□□□□ -0.23
SCJ1YMR214W UIP4Q08926 304 aa13.61□□□□□ -0.23
SCJ1YMR214W MET17P06106 444 aa13.6□□□□□ -0.23
SCJ1YMR214W TIM12P32830 109 aa13.6□□□□□ -0.23
SCJ1YMR214W RET2P43621 546 aa13.6□□□□□ -0.23
SCJ1YMR214W SNZ1Q03148 297 aa13.6□□□□□ -0.23
SCJ1YMR214W NCE102Q12207 173 aaRIP-Chip data13.6□□□□□ -0.23not detected
SCJ1YMR214W MET2P08465 486 aa13.59□□□□□ -0.23
SCJ1YMR214W ENA1P13587 1091 aa13.59□□□□□ -0.23
SCJ1YMR214W ECM4P36156 370 aa13.59□□□□□ -0.23
SCJ1YMR214W YMR144WP40214 342 aaKnown RBP13.59□□□□□ -0.23
SCJ1YMR214W ENA2Q01896 1091 aa13.59□□□□□ -0.23
SCJ1YMR214W SDC1Q03323 175 aa13.59□□□□□ -0.23
SCJ1YMR214W ERB1Q04660 807 aaKnown RBP13.59□□□□□ -0.23
SCJ1YMR214W NOP12Q08208 459 aaKnown RBP13.59□□□□□ -0.23
SCJ1YMR214W AVO1Q08236 1176 aa13.59□□□□□ -0.23
SCJ1YMR214W RRG7Q08774 242 aaPredicted RBP13.59□□□□□ -0.23
SCJ1YMR214W ENA5Q12691 1091 aa13.59□□□□□ -0.23
SCJ1YMR214W YPK2P18961 677 aa13.58□□□□□ -0.24
SCJ1YMR214W IDP1P21954 428 aaKnown RBP13.58□□□□□ -0.24
SCJ1YMR214W VMA6P32366 345 aaKnown RBP13.58□□□□□ -0.24
SCJ1YMR214W MAE1P36013 669 aaKnown RBP13.58□□□□□ -0.24
SCJ1YMR214W GDI1P39958 451 aaKnown RBP13.58□□□□□ -0.24
SCJ1YMR214W REE1P40893 198 aa13.58□□□□□ -0.24
SCJ1YMR214W EKI1Q03764 534 aa13.58□□□□□ -0.24
SCJ1YMR214W SYO1Q07395 620 aa13.58□□□□□ -0.24
SCJ1YMR214W DPM1P14020 267 aaKnown RBP13.57□□□□□ -0.24
SCJ1YMR214W RAD51P25454 400 aa13.57□□□□□ -0.24
SCJ1YMR214W YGL235WP53071 178 aa13.57□□□□□ -0.24
SCJ1YMR214W YGR066CP53242 292 aa13.57□□□□□ -0.24
SCJ1YMR214W MAL12P53341 584 aa13.57□□□□□ -0.24
SCJ1YMR214W DML1Q03652 475 aa13.57□□□□□ -0.24
SCJ1YMR214W HRI1Q05905 244 aaKnown RBP13.57□□□□□ -0.24
SCJ1YMR214W YDL007C-AQ2V2Q0 85 aa13.57□□□□□ -0.24
SCJ1YMR214W YEF1P32622 495 aa13.56□□□□□ -0.24
SCJ1YMR214W YKR015CP36111 568 aa13.56□□□□□ -0.24
SCJ1YMR214W MTC4P38335 694 aaKnown RBP13.56□□□□□ -0.24
SCJ1YMR214W YMR262WP38430 313 aa13.56□□□□□ -0.24
SCJ1YMR214W RPS20P38701 121 aaKnown RBP13.56□□□□□ -0.24
SCJ1YMR214W YNR062CP53748 327 aa13.56□□□□□ -0.24
SCJ1YMR214W RHO5P53879 331 aaKnown RBP13.56□□□□□ -0.24
SCJ1YMR214W PRP3Q03338 469 aaPredicted RBP13.56□□□□□ -0.24
SCJ1YMR214W OST6Q03723 332 aa13.56□□□□□ -0.24
SCJ1YMR214W RNH1Q04740 348 aa13.56□□□□□ -0.24
SCJ1YMR214W ENB1Q08299 606 aa13.56□□□□□ -0.24
SCJ1YMR214W CBP6P07253 162 aaPredicted RBP13.55□□□□□ -0.24
SCJ1YMR214W TAL1P15019 335 aaKnown RBP13.55□□□□□ -0.24
SCJ1YMR214W PRP28P23394 588 aa13.55□□□□□ -0.24
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms