RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	TOK1	P40310	691 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	SHR5	P41912	237 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	GCN20	P43535	752 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	YGL235W	P53071	178 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	MPA43	P53583	542 aa	Predicted RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	YKR011C	Q02209	353 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	PEX25	Q02969	394 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	RSM10	Q03201	203 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	YMD8	Q03697	442 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	YLR345W	Q06137	509 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	ARV1	Q06541	321 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	NOP12	Q08208	459 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	BRX1	Q08235	291 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	TPO4	Q12256	659 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	FRE7	Q12333	620 aa		4.17	□□□□□ -1.74
CBF5	YLR175W	PST2	Q12335	198 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	DBP10	Q12389	995 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	GCN1	P33892	2672 aa	Known RBP	4.17	□□□□□ -1.74
CBF5	YLR175W	YOL162W	P0CF19	215 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	TAL1	P15019	335 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	KGD1	P20967	1014 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	YCR100C	P25606	316 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	CWH43	P25618	953 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	PUP2	P32379	260 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YME2	P32843	850 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YPT7	P32939	208 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	SPC29	P33419	253 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YKR015C	P36111	568 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YBR139W	P38109	508 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	SSZ1	P38788	538 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	RRP4	P38792	359 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	SBE22	P38814	852 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	NSG1	P38837	291 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	IES5	P40060	125 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	SOK1	P40317	901 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	CUP9	P41817	306 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	SWP82	P43554	623 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	MDE1	P47095	244 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	HMS2	P47175	358 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	PMT3	P47190	753 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YGL101W	P53144	215 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	LSG1	P53145	640 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	RBG2	P53295	368 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	RHO5	P53879	331 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	ASI1	P54074	624 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	INP1	Q03694	420 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YDR179W-A	Q03983	463 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	ERB1	Q04660	807 aa	Known RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	DCR2	Q05924	578 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YPS7	Q06325	596 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	YPR127W	Q06494	345 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	SYO1	Q07395	620 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	RSC58	Q07979	502 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	SKI7	Q08491	747 aa	Predicted RBP	4.16	□□□□□ -1.74
CBF5	YLR175W	SIA1	Q12212	622 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	NKP1	Q12493	238 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	TAD3	Q9URQ3	322 aa		4.16	□□□□□ -1.74
CBF5	YLR175W	URE2	P23202	354 aa	Known RBP	4.15	□□□□□ -1.75
CBF5	YLR175W	SNC1	P31109	117 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	OAC1	P32332	324 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	EMP70	P32802	667 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	DHR2	P36009	735 aa	Predicted RBP	4.15	□□□□□ -1.75
CBF5	YLR175W	ARN2	P38724	620 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	ZRG8	P40021	1076 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	KRE29	P40026	464 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	YNL195C	P40168	261 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	YIL166C	P40445	542 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	BAP3	P41815	604 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	RET2	P43621	546 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	OCA1	P50946	238 aa	Predicted RBP	4.15	□□□□□ -1.75
CBF5	YLR175W	COS1	P53822	381 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	ARP10	Q04549	284 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	ELP6	Q04868	273 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	PAL1	Q05518	499 aa	Known RBP	4.15	□□□□□ -1.75
CBF5	YLR175W	MDM30	Q05930	598 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	SNT309	Q06091	175 aa	Predicted RBP	4.15	□□□□□ -1.75
CBF5	YLR175W	AKR2	Q12013	749 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	PNS1	Q12412	539 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	YPR053C	Q6Q5F3	151 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	YOR032W-A	Q8TGS1	66 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	DFG16	Q99234	619 aa		4.15	□□□□□ -1.75
CBF5	YLR175W	SNF6	P18888	332 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	IDP1	P21954	428 aa	Known RBP	4.14	□□□□□ -1.75
CBF5	YLR175W	RPS5	P26783	225 aa	Known RBP	4.14	□□□□□ -1.75
CBF5	YLR175W	COQ2	P32378	372 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	TIM12	P32830	109 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	TRS65	P32893	560 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	GPX1	P36014	167 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	ECM4	P36156	370 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	RIX1	P38883	763 aa	Predicted RBP	4.14	□□□□□ -1.75
CBF5	YLR175W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
CBF5	YLR175W	AVT6	P40074	448 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	BUR6	P40096	142 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	SNO3	P43544	222 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	RBL2	P48606	106 aa	Known RBP	4.14	□□□□□ -1.75
CBF5	YLR175W	NIT3	P49954	291 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	NQM1	P53228	333 aa	Predicted RBP	4.14	□□□□□ -1.75
CBF5	YLR175W	SPC19	Q03954	165 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	PLM2	Q04383	521 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	MLC2	Q06580	163 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms