RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W HSP32Q08992 237 aa9.05□□□□□ -0.96
SHH4YLR164W YOR289WQ12012 251 aaPredicted RBP9.05□□□□□ -0.96
SHH4YLR164W YRM1Q12340 786 aa9.05□□□□□ -0.96
SHH4YLR164W APC2Q12440 853 aa9.05□□□□□ -0.96
SHH4YLR164W RAS1P01119 309 aa9.04□□□□□ -0.96
SHH4YLR164W CYT1P07143 309 aa9.04□□□□□ -0.96
SHH4YLR164W CTA1P15202 515 aa9.04□□□□□ -0.96
SHH4YLR164W PRP28P23394 588 aa9.04□□□□□ -0.96
SHH4YLR164W YHR180WP38868 163 aa9.04□□□□□ -0.96
SHH4YLR164W MDM31P38880 579 aa9.04□□□□□ -0.96
SHH4YLR164W YIL067CP40514 678 aa9.04□□□□□ -0.96
SHH4YLR164W RPE1P46969 238 aa9.04□□□□□ -0.96
SHH4YLR164W YGL101WP53144 215 aa9.04□□□□□ -0.96
SHH4YLR164W NQM1P53228 333 aaPredicted RBP9.04□□□□□ -0.96
SHH4YLR164W RRN9P53437 365 aa9.04□□□□□ -0.96
SHH4YLR164W CUZ1P53899 274 aa9.04□□□□□ -0.96
SHH4YLR164W NUP53Q03790 475 aa9.04□□□□□ -0.96
SHH4YLR164W FRE5Q08908 694 aa9.04□□□□□ -0.96
SHH4YLR164W YDL109CQ12103 647 aa9.04□□□□□ -0.96
SHH4YLR164W YGR161W-CQ3E744 92 aa9.04□□□□□ -0.96
SHH4YLR164W MDH1P17505 334 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
SHH4YLR164W CPR3P25719 182 aa9.03□□□□□ -0.96
SHH4YLR164W NAM9P27929 486 aa9.03□□□□□ -0.96
SHH4YLR164W SHE1P38200 338 aa9.03□□□□□ -0.96
SHH4YLR164W YHR035WP38769 630 aa9.03□□□□□ -0.96
SHH4YLR164W YJL193WP39542 402 aa9.03□□□□□ -0.96
SHH4YLR164W IRC6P43615 237 aa9.03□□□□□ -0.96
SHH4YLR164W MPP6P53725 186 aaPredicted RBP9.03□□□□□ -0.96
SHH4YLR164W DCR2Q05924 578 aa9.03□□□□□ -0.96
SHH4YLR164W NEJ1Q06148 342 aa9.03□□□□□ -0.96
SHH4YLR164W TAZ1Q06510 381 aa9.03□□□□□ -0.96
SHH4YLR164W YOR389WQ08912 624 aa9.03□□□□□ -0.96
SHH4YLR164W YOS9Q99220 542 aa9.03□□□□□ -0.96
SHH4YLR164W LDB16P25587 256 aa9.02□□□□□ -0.97
SHH4YLR164W GRE3P38715 327 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
SHH4YLR164W PAM16P42949 149 aa9.02□□□□□ -0.97
SHH4YLR164W BPL1P48445 690 aaPredicted RBP9.02□□□□□ -0.97
SHH4YLR164W CGI121Q03705 181 aaKnown RBP9.02□□□□□ -0.97
SHH4YLR164W YLR173WQ06247 608 aa9.02□□□□□ -0.97
SHH4YLR164W YPQ2Q06328 317 aa9.02□□□□□ -0.97
SHH4YLR164W RLM1Q12224 676 aa9.02□□□□□ -0.97
SHH4YLR164W KIN28P06242 306 aa9.01□□□□□ -0.97
SHH4YLR164W SCO1P23833 295 aa9.01□□□□□ -0.97
SHH4YLR164W RAD51P25454 400 aa9.01□□□□□ -0.97
SHH4YLR164W MDH3P32419 343 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
SHH4YLR164W YKL071WP36086 256 aa9.01□□□□□ -0.97
SHH4YLR164W YPK3P38070 525 aa9.01□□□□□ -0.97
SHH4YLR164W CHS7P38843 316 aa9.01□□□□□ -0.97
SHH4YLR164W NAB3P38996 802 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
SHH4YLR164W PGU1P47180 361 aa9.01□□□□□ -0.97
SHH4YLR164W RRP17Q04031 235 aaPredicted RBP9.01□□□□□ -0.97
SHH4YLR164W YPR109WQ06104 294 aa9.01□□□□□ -0.97
SHH4YLR164W YPL191CQ08930 360 aa9.01□□□□□ -0.97
SHH4YLR164W THP3Q12049 470 aaKnown RBP9.01□□□□□ -0.97
SHH4YLR164W SWM1Q12379 170 aa9.01□□□□□ -0.97
SHH4YLR164W YOR343CQ12484 108 aa9.01□□□□□ -0.97
SHH4YLR164W YBR056W-AI2HB52 66 aa9□□□□□ -0.97
SHH4YLR164W HAP4P14064 554 aa9□□□□□ -0.97
SHH4YLR164W PHO80P20052 293 aa9□□□□□ -0.97
SHH4YLR164W GAS1P22146 559 aaKnown RBP9□□□□□ -0.97
SHH4YLR164W RPL24BP24000 155 aaKnown RBP9□□□□□ -0.97
SHH4YLR164W CWH43P25618 953 aa9□□□□□ -0.97
SHH4YLR164W TRS65P32893 560 aa9□□□□□ -0.97
SHH4YLR164W SUR1P33300 382 aa9□□□□□ -0.97
SHH4YLR164W PAD1P33751 242 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SHH4YLR164W MAL32P38158 584 aa9□□□□□ -0.97
SHH4YLR164W PCL6P40038 420 aa9□□□□□ -0.97
SHH4YLR164W YER158CP40095 573 aa9□□□□□ -0.97
SHH4YLR164W NTA1P40354 457 aa9□□□□□ -0.97
SHH4YLR164W PKP1P40530 394 aa9□□□□□ -0.97
SHH4YLR164W PPT1P53043 513 aa9□□□□□ -0.97
SHH4YLR164W MAL12P53341 584 aa9□□□□□ -0.97
SHH4YLR164W YDR209CQ03480 137 aa9□□□□□ -0.97
SHH4YLR164W COX20Q04935 205 aa9□□□□□ -0.97
SHH4YLR164W COQ10Q08058 207 aa9□□□□□ -0.97
SHH4YLR164W YDL176WQ12027 708 aa9□□□□□ -0.97
SHH4YLR164W MDM32Q12171 622 aa9□□□□□ -0.97
SHH4YLR164W PCL9Q12477 304 aa9□□□□□ -0.97
SHH4YLR164W SET6Q12529 373 aa9□□□□□ -0.97
SHH4YLR164W FPS1P23900 669 aa8.99□□□□□ -0.97
SHH4YLR164W NIC96P34077 839 aa8.99□□□□□ -0.97
SHH4YLR164W GPX1P36014 167 aa8.99□□□□□ -0.97
SHH4YLR164W SER3P40054 469 aa8.99□□□□□ -0.97
SHH4YLR164W IES5P40060 125 aa8.99□□□□□ -0.97
SHH4YLR164W RBL2P48606 106 aaKnown RBP8.99□□□□□ -0.97
SHH4YLR164W COS10P52924 374 aa8.99□□□□□ -0.97
SHH4YLR164W BRR6P53062 197 aa8.99□□□□□ -0.97
SHH4YLR164W PFA5Q03289 374 aa8.99□□□□□ -0.97
SHH4YLR164W MRPL1Q04599 285 aa8.99□□□□□ -0.97
SHH4YLR164W GAL83Q04739 417 aa8.99□□□□□ -0.97
SHH4YLR164W RRP9Q06506 573 aaKnown RBP8.99□□□□□ -0.97
SHH4YLR164W GLT1Q12680 2145 aaKnown RBP8.98□□□□□ -0.97
SHH4YLR164W NUP1P20676 1076 aa8.98□□□□□ -0.97
SHH4YLR164W MSN4P33749 630 aa8.98□□□□□ -0.97
SHH4YLR164W UTP11P34247 250 aaPredicted RBP8.98□□□□□ -0.97
SHH4YLR164W FET3P38993 636 aa8.98□□□□□ -0.97
SHH4YLR164W YER010CP40011 234 aa8.98□□□□□ -0.97
SHH4YLR164W FMC1P40491 155 aa8.98□□□□□ -0.97
SHH4YLR164W IDS2P46958 469 aa8.98□□□□□ -0.97
SHH4YLR164W ATG4P53867 494 aa8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms