RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C CTK3P46963 296 aaPredicted RBP2.32□□□□□ -2.04
NYV1YLR093C EMC2P47133 292 aaKnown RBP2.32□□□□□ -2.04
NYV1YLR093C BIR1P47134 954 aa2.32□□□□□ -2.04
NYV1YLR093C TRF5P48561 642 aaKnown RBP2.32□□□□□ -2.04
NYV1YLR093C YPS5P53057 165 aa2.32□□□□□ -2.04
NYV1YLR093C LSB1P53281 241 aa2.32□□□□□ -2.04
NYV1YLR093C OKP1P53298 406 aa2.32□□□□□ -2.04
NYV1YLR093C YNL050CP53952 270 aa2.32□□□□□ -2.04
NYV1YLR093C NUP116Q02630 1113 aa2.32□□□□□ -2.04
NYV1YLR093C ATC1Q04005 294 aa2.32□□□□□ -2.04
NYV1YLR093C BOP2Q06150 570 aa2.32□□□□□ -2.04
NYV1YLR093C TY3A-GQ12173 290 aa2.32□□□□□ -2.04
NYV1YLR093C PRP46Q12417 451 aaPredicted RBP2.32□□□□□ -2.04
NYV1YLR093C YCR024C-BQ3E7Z8 88 aa2.32□□□□□ -2.04
NYV1YLR093C TY3A-IQ99219 290 aa2.32□□□□□ -2.04
NYV1YLR093C MEX67Q99257 599 aaKnown RBP2.32□□□□□ -2.04
NYV1YLR093C SAL1D6W196 494 aa2.31□□□□□ -2.04
NYV1YLR093C RPL24AP04449 155 aaKnown RBP2.31□□□□□ -2.04
NYV1YLR093C RSR1P13856 272 aa2.31□□□□□ -2.04
NYV1YLR093C SMF2P38778 549 aa2.31□□□□□ -2.04
NYV1YLR093C YHR182WP38870 785 aa2.31□□□□□ -2.04
NYV1YLR093C BFR1P38934 470 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
NYV1YLR093C SLM1P40485 686 aa2.31□□□□□ -2.04
NYV1YLR093C COX16P47081 118 aa2.31□□□□□ -2.04
NYV1YLR093C MRM2P53123 320 aa2.31□□□□□ -2.04
NYV1YLR093C LSG1P53145 640 aaKnown RBP2.31□□□□□ -2.04
NYV1YLR093C YLR173WQ06247 608 aa2.31□□□□□ -2.04
NYV1YLR093C SLM3Q12093 417 aa2.31□□□□□ -2.04
NYV1YLR093C SGT2Q12118 346 aaKnown RBP2.31□□□□□ -2.04
NYV1YLR093C SIA1Q12212 622 aa2.31□□□□□ -2.04
NYV1YLR093C YPR1Q12458 312 aa2.31□□□□□ -2.04
NYV1YLR093C RAX2Q12465 1220 aa2.31□□□□□ -2.04
NYV1YLR093C UBA3Q99344 299 aa2.31□□□□□ -2.04
NYV1YLR093C COX2P00410 251 aa2.3□□□□□ -2.04
NYV1YLR093C MSF1P08425 469 aa2.3□□□□□ -2.04
NYV1YLR093C POL30P15873 258 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C CHA1P25379 360 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C TAE1P38340 232 aa2.3□□□□□ -2.04
NYV1YLR093C YPT35P38815 214 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C CTM1P38818 585 aa2.3□□□□□ -2.04
NYV1YLR093C COX14P39103 70 aa2.3□□□□□ -2.04
NYV1YLR093C PRM9P39551 298 aa2.3□□□□□ -2.04
NYV1YLR093C YIL029CP40538 142 aa2.3□□□□□ -2.04
NYV1YLR093C YAR1P46683 200 aa2.3□□□□□ -2.04
NYV1YLR093C LIA1P47120 325 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C PGU1P47180 361 aa2.3□□□□□ -2.04
NYV1YLR093C TRM112P53738 135 aaPredicted RBP2.3□□□□□ -2.04
NYV1YLR093C MNT4P53745 580 aa2.3□□□□□ -2.04
NYV1YLR093C YNL134CP53912 376 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C TPS1Q00764 495 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C YMR102CQ03177 834 aa2.3□□□□□ -2.04
NYV1YLR093C TDA1Q03533 586 aa2.3□□□□□ -2.04
NYV1YLR093C YET2Q04210 160 aa2.3□□□□□ -2.04
NYV1YLR093C SAM4Q08985 325 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C YGK3Q12222 375 aaPredicted RBP2.3□□□□□ -2.04
NYV1YLR093C RUD3Q12234 484 aaKnown RBP2.3□□□□□ -2.04
NYV1YLR093C TDH3P00359 332 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
NYV1YLR093C ATP6P00854 259 aa2.29□□□□□ -2.04
NYV1YLR093C PIS1P06197 220 aaKnown RBP2.29□□□□□ -2.04
NYV1YLR093C HPR1P17629 752 aaKnown RBP2.29□□□□□ -2.04
NYV1YLR093C RBK1P25332 333 aa2.29□□□□□ -2.04
NYV1YLR093C CSM1P25651 190 aa2.29□□□□□ -2.04
NYV1YLR093C CDC50P25656 391 aa2.29□□□□□ -2.04
NYV1YLR093C FUN26P31381 517 aa2.29□□□□□ -2.04
NYV1YLR093C GCG1P32656 232 aaKnown RBP2.29□□□□□ -2.04
NYV1YLR093C FMT1P32785 401 aa2.29□□□□□ -2.04
NYV1YLR093C RAD5P32849 1169 aaPredicted RBP2.29□□□□□ -2.04
NYV1YLR093C SPO23P33757 523 aa2.29□□□□□ -2.04
NYV1YLR093C COS9P36034 407 aa2.29□□□□□ -2.04
NYV1YLR093C YMR262WP38430 313 aa2.29□□□□□ -2.04
NYV1YLR093C HIS2P38635 335 aa2.29□□□□□ -2.04
NYV1YLR093C CIN2P46670 268 aa2.29□□□□□ -2.04
NYV1YLR093C YJR030CP47101 745 aa2.29□□□□□ -2.04
NYV1YLR093C BNS1P50084 137 aa2.29□□□□□ -2.04
NYV1YLR093C KAP114P53067 1004 aa2.29□□□□□ -2.04
NYV1YLR093C SPP2Q02521 185 aa2.29□□□□□ -2.04
NYV1YLR093C SRL4Q03085 281 aa2.29□□□□□ -2.04
NYV1YLR093C PRM6Q04705 352 aa2.29□□□□□ -2.04
NYV1YLR093C COX20Q04935 205 aa2.29□□□□□ -2.04
NYV1YLR093C PIN3Q06449 215 aa2.29□□□□□ -2.04
NYV1YLR093C ARV1Q06541 321 aa2.29□□□□□ -2.04
NYV1YLR093C YDL114WQ07530 308 aa2.29□□□□□ -2.04
NYV1YLR093C LOT6Q07923 191 aa2.29□□□□□ -2.04
NYV1YLR093C SLF1Q12034 447 aaKnown RBP2.29□□□□□ -2.04
NYV1YLR093C APC9Q12107 265 aa2.29□□□□□ -2.04
NYV1YLR093C YOL107WQ12239 342 aa2.29□□□□□ -2.04
NYV1YLR093C RPN6Q12377 434 aa2.29□□□□□ -2.04
NYV1YLR093C ICL1P28240 557 aaPredicted RBP2.28□□□□□ -2.04
NYV1YLR093C ARO4P32449 370 aaKnown RBP2.28□□□□□ -2.04
NYV1YLR093C IMP3P32899 183 aaPredicted RBP2.28□□□□□ -2.04
NYV1YLR093C RCK2P38623 610 aa2.28□□□□□ -2.04
NYV1YLR093C YHR035WP38769 630 aa2.28□□□□□ -2.04
NYV1YLR093C GCN20P43535 752 aaKnown RBP2.28□□□□□ -2.04
NYV1YLR093C AGP3P43548 558 aa2.28□□□□□ -2.04
NYV1YLR093C ATG18P43601 500 aa2.28□□□□□ -2.04
NYV1YLR093C PMT4P46971 762 aa2.28□□□□□ -2.04
NYV1YLR093C LCB3P47013 409 aa2.28□□□□□ -2.04
NYV1YLR093C AIM24P47127 394 aa2.28□□□□□ -2.04
NYV1YLR093C SEH1P53011 349 aaKnown RBP2.28□□□□□ -2.04
NYV1YLR093C MST27P53176 234 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms