RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YHR122WP38829 231 aa1.87□□□□□ -2.11
CMS1YLR003C GGC1P38988 300 aa1.87□□□□□ -2.11
CMS1YLR003C YCH1P42937 148 aa1.87□□□□□ -2.11
CMS1YLR003C YAL067W-AQ8TGK6 75 aa1.87□□□□□ -2.11
CMS1YLR003C RNR2P09938 399 aaKnown RBP1.86□□□□□ -2.11
CMS1YLR003C CTA1P15202 515 aa1.86□□□□□ -2.11
CMS1YLR003C ERG9P29704 444 aa1.86□□□□□ -2.11
CMS1YLR003C TAE1P38340 232 aa1.86□□□□□ -2.11
CMS1YLR003C FHL1P39521 936 aa1.86□□□□□ -2.11
CMS1YLR003C YMR134WP40207 237 aa1.86□□□□□ -2.11
CMS1YLR003C BTT1P40314 149 aaPredicted RBP1.86□□□□□ -2.11
CMS1YLR003C YFR018CP43599 363 aa1.86□□□□□ -2.11
CMS1YLR003C COQ5P49017 307 aa1.86□□□□□ -2.11
CMS1YLR003C SHE4P51534 789 aa1.86□□□□□ -2.11
CMS1YLR003C PXR1P53335 271 aaPredicted RBP1.86□□□□□ -2.11
CMS1YLR003C RVB1Q03940 463 aaKnown RBP1.86□□□□□ -2.11
CMS1YLR003C UTP15Q04305 513 aaKnown RBP1.86□□□□□ -2.11
CMS1YLR003C MRX8Q05473 314 aa1.86□□□□□ -2.11
CMS1YLR003C ALE1Q08548 619 aa1.86□□□□□ -2.11
CMS1YLR003C TAF10Q12030 206 aa1.86□□□□□ -2.11
CMS1YLR003C GAL3P13045 520 aa1.85□□□□□ -2.11
CMS1YLR003C ITR2P30606 609 aa1.85□□□□□ -2.11
CMS1YLR003C VMA5P31412 392 aaKnown RBP1.85□□□□□ -2.11
CMS1YLR003C KTI12P34253 313 aaKnown RBP1.85□□□□□ -2.11
CMS1YLR003C SHE3P38272 425 aaKnown RBP1.85□□□□□ -2.11
CMS1YLR003C SMF2P38778 549 aa1.85□□□□□ -2.11
CMS1YLR003C END3P39013 349 aa1.85□□□□□ -2.11
CMS1YLR003C NAS2P40555 220 aa1.85□□□□□ -2.11
CMS1YLR003C TAF6P53040 516 aa1.85□□□□□ -2.11
CMS1YLR003C INP1Q03694 420 aa1.85□□□□□ -2.11
CMS1YLR003C RPN6Q12377 434 aa1.85□□□□□ -2.11
CMS1YLR003C AUS1Q08409 1394 aa1.85□□□□□ -2.11
CMS1YLR003C VPS63O13549 108 aa1.84□□□□□ -2.11
CMS1YLR003C VMA2P16140 517 aaKnown RBP1.84□□□□□ -2.11
CMS1YLR003C ERD1P16151 362 aa1.84□□□□□ -2.11
CMS1YLR003C PEX32P38292 413 aa1.84□□□□□ -2.11
CMS1YLR003C MMS21P38632 267 aa1.84□□□□□ -2.11
CMS1YLR003C FYV8P46949 817 aaKnown RBP1.84□□□□□ -2.11
CMS1YLR003C YLR297WQ05899 129 aa1.84□□□□□ -2.11
CMS1YLR003C SLF1Q12034 447 aaKnown RBP1.84□□□□□ -2.11
CMS1YLR003C YDR262WQ12331 272 aa1.84□□□□□ -2.11
CMS1YLR003C YPR1Q12458 312 aa1.84□□□□□ -2.11
CMS1YLR003C TPI1P00942 248 aaKnown RBP1.83□□□□□ -2.12
CMS1YLR003C RPL18AP0CX49 186 aaKnown RBP1.83□□□□□ -2.12
CMS1YLR003C RPL18BP0CX50 186 aaKnown RBP1.83□□□□□ -2.12
CMS1YLR003C TPM1P17536 199 aaKnown RBP1.83□□□□□ -2.12
CMS1YLR003C YPS1P32329 569 aa1.83□□□□□ -2.12
CMS1YLR003C SRB2P34162 210 aa1.83□□□□□ -2.12
CMS1YLR003C DBP7P36120 742 aaKnown RBP1.83□□□□□ -2.12
CMS1YLR003C LIN1P38852 340 aaPredicted RBP1.83□□□□□ -2.12
CMS1YLR003C AIM20P40451 204 aa1.83□□□□□ -2.12
CMS1YLR003C PFS2P42841 465 aaKnown RBP1.83□□□□□ -2.12
CMS1YLR003C FMP48P53233 369 aa1.83□□□□□ -2.12
CMS1YLR003C YGR067CP53243 804 aa1.83□□□□□ -2.12
CMS1YLR003C SED5Q01590 340 aa1.83□□□□□ -2.12
CMS1YLR003C YPL080CQ02826 108 aa1.83□□□□□ -2.12
CMS1YLR003C ABZ2Q03266 374 aa1.83□□□□□ -2.12
CMS1YLR003C SCS7Q03529 384 aa1.83□□□□□ -2.12
CMS1YLR003C YMR244WQ04018 355 aa1.83□□□□□ -2.12
CMS1YLR003C CDC37P06101 506 aaKnown RBP1.82□□□□□ -2.12
CMS1YLR003C MRPL20P22354 195 aaPredicted RBP1.82□□□□□ -2.12
CMS1YLR003C ZRT1P32804 376 aa1.82□□□□□ -2.12
CMS1YLR003C CYM1P32898 989 aa1.82□□□□□ -2.12
CMS1YLR003C SKG6P32900 734 aaPredicted RBP1.82□□□□□ -2.12
CMS1YLR003C CBF5P33322 483 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
CMS1YLR003C EFM1P38732 585 aa1.82□□□□□ -2.12
CMS1YLR003C FRT2P39734 528 aa1.82□□□□□ -2.12
CMS1YLR003C CAB5Q03941 241 aa1.82□□□□□ -2.12
CMS1YLR003C RPN8Q08723 338 aaKnown RBP1.82□□□□□ -2.12
CMS1YLR003C SAM4Q08985 325 aaKnown RBP1.82□□□□□ -2.12
CMS1YLR003C YDL211CQ12121 372 aa1.82□□□□□ -2.12
CMS1YLR003C REP1P03871 373 aa1.81□□□□□ -2.12
CMS1YLR003C DCC1P25559 380 aa1.81□□□□□ -2.12
CMS1YLR003C INO2P26798 304 aa1.81□□□□□ -2.12
CMS1YLR003C ACB1P31787 87 aa1.81□□□□□ -2.12
CMS1YLR003C FMT1P32785 401 aa1.81□□□□□ -2.12
CMS1YLR003C RFT1P38206 574 aaPredicted RBP1.81□□□□□ -2.12
CMS1YLR003C SWC5P38326 303 aa1.81□□□□□ -2.12
CMS1YLR003C CTM1P38818 585 aa1.81□□□□□ -2.12
CMS1YLR003C BDH1P39714 382 aa1.81□□□□□ -2.12
CMS1YLR003C OSW5P40219 148 aa1.81□□□□□ -2.12
CMS1YLR003C ASG7P46993 209 aa1.81□□□□□ -2.12
CMS1YLR003C TPC1P53257 314 aa1.81□□□□□ -2.12
CMS1YLR003C IRC4Q03036 179 aa1.81□□□□□ -2.12
CMS1YLR003C YMR111CQ04461 462 aaPredicted RBP1.81□□□□□ -2.12
CMS1YLR003C PIN3Q06449 215 aa1.81□□□□□ -2.12
CMS1YLR003C REX3Q12090 404 aa1.81□□□□□ -2.12
CMS1YLR003C TFC7Q12415 435 aa1.81□□□□□ -2.12
CMS1YLR003C YOL085CQ99345 113 aa1.81□□□□□ -2.12
CMS1YLR003C RAD7P06779 565 aa1.8□□□□□ -2.12
CMS1YLR003C FUS3P16892 353 aaKnown RBP1.8□□□□□ -2.12
CMS1YLR003C RAD23P32628 398 aaKnown RBP1.8□□□□□ -2.12
CMS1YLR003C BUD2P33314 1104 aa1.8□□□□□ -2.12
CMS1YLR003C TIP20P33891 701 aa1.8□□□□□ -2.12
CMS1YLR003C ZRT3P34240 503 aa1.8□□□□□ -2.12
CMS1YLR003C YMR262WP38430 313 aa1.8□□□□□ -2.12
CMS1YLR003C SSO2P39926 295 aa1.8□□□□□ -2.12
CMS1YLR003C DSE1P40077 573 aa1.8□□□□□ -2.12
CMS1YLR003C UTP25P40498 721 aaKnown RBP1.8□□□□□ -2.12
CMS1YLR003C YIR035CP40579 254 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms