RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeastyeast

Gene SOD1, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD1YJR104C TMS1Q12116 473 aa3.32□□□□□ -1.88
SOD1YJR104C NMD4Q12129 218 aa3.32□□□□□ -1.88
SOD1YJR104C YLR126CQ12288 251 aa3.32□□□□□ -1.88
SOD1YJR104C LPX1Q12405 387 aaKnown RBP3.32□□□□□ -1.88
SOD1YJR104C YPR053CQ6Q5F3 151 aa3.32□□□□□ -1.88
SOD1YJR104C HBN1Q96VH4 193 aa3.32□□□□□ -1.88
SOD1YJR104C COX3P00420 269 aa3.31□□□□□ -1.88
SOD1YJR104C MSF1P08425 469 aa3.31□□□□□ -1.88
SOD1YJR104C RPL31AP0C2H8 113 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C RPL31BP0C2H9 113 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C PUT4P15380 627 aa3.31□□□□□ -1.88
SOD1YJR104C MDH1P17505 334 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
SOD1YJR104C SEC62P21825 274 aa3.31□□□□□ -1.88
SOD1YJR104C TRX1P22217 103 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C DBR1P24309 405 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C MNE1P24720 663 aa3.31□□□□□ -1.88
SOD1YJR104C DAL2P25335 343 aa3.31□□□□□ -1.88
SOD1YJR104C BUB3P26449 341 aa3.31□□□□□ -1.88
SOD1YJR104C BEM1P29366 551 aa3.31□□□□□ -1.88
SOD1YJR104C SNC1P31109 117 aa3.31□□□□□ -1.88
SOD1YJR104C MRPL9P31334 269 aa3.31□□□□□ -1.88
SOD1YJR104C PRO1P32264 428 aa3.31□□□□□ -1.88
SOD1YJR104C RIM1P32445 135 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C DAL3P32459 195 aa3.31□□□□□ -1.88
SOD1YJR104C CDC12P32468 407 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C RPD3P32561 433 aa3.31□□□□□ -1.88
SOD1YJR104C SPS19P32573 292 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C GSP1P32835 219 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C GSP2P32836 220 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C SUR1P33300 382 aa3.31□□□□□ -1.88
SOD1YJR104C YKL162CP36052 402 aa3.31□□□□□ -1.88
SOD1YJR104C TUL1P36096 758 aa3.31□□□□□ -1.88
SOD1YJR104C YKR051WP36142 418 aa3.31□□□□□ -1.88
SOD1YJR104C BET3P36149 193 aa3.31□□□□□ -1.88
SOD1YJR104C ROT2P38138 954 aa3.31□□□□□ -1.88
SOD1YJR104C ATG12P38316 186 aa3.31□□□□□ -1.88
SOD1YJR104C SHG1P38337 142 aa3.31□□□□□ -1.88
SOD1YJR104C SSH1P38353 490 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C RCK1P38622 512 aa3.31□□□□□ -1.88
SOD1YJR104C CBR1P38626 284 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C YHR054CP38780 354 aa3.31□□□□□ -1.88
SOD1YJR104C EAF5P39995 279 aa3.31□□□□□ -1.88
SOD1YJR104C BTT1P40314 149 aaPredicted RBP3.31□□□□□ -1.88
SOD1YJR104C POG1P40473 351 aa3.31□□□□□ -1.88
SOD1YJR104C YIL108WP40483 696 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C ERR3P42222 437 aa3.31□□□□□ -1.88
SOD1YJR104C AIM22P47051 409 aa3.31□□□□□ -1.88
SOD1YJR104C MPS3P47069 682 aa3.31□□□□□ -1.88
SOD1YJR104C TAH11P47112 604 aa3.31□□□□□ -1.88
SOD1YJR104C JHD2P47156 728 aaPredicted RBP3.31□□□□□ -1.88
SOD1YJR104C NBP35P52920 328 aa3.31□□□□□ -1.88
SOD1YJR104C VOA1P53262 265 aa3.31□□□□□ -1.88
SOD1YJR104C BUD32P53323 261 aa3.31□□□□□ -1.88
SOD1YJR104C MKC7P53379 596 aa3.31□□□□□ -1.88
SOD1YJR104C SSU72P53538 206 aaPredicted RBP3.31□□□□□ -1.88
SOD1YJR104C MTQ1P53944 314 aa3.31□□□□□ -1.88
SOD1YJR104C KTR6P54070 446 aa3.31□□□□□ -1.88
SOD1YJR104C ERV25P54837 211 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C REG1Q00816 1014 aa3.31□□□□□ -1.88
SOD1YJR104C RPA49Q01080 415 aaPredicted RBP3.31□□□□□ -1.88
SOD1YJR104C TOF2Q02208 771 aa3.31□□□□□ -1.88
SOD1YJR104C GRX5Q02784 150 aa3.31□□□□□ -1.88
SOD1YJR104C RNY1Q02933 434 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C OST6Q03723 332 aa3.31□□□□□ -1.88
SOD1YJR104C LRS4Q04087 347 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C YMR034CQ05131 434 aaPredicted RBP3.31□□□□□ -1.88
SOD1YJR104C BNA5Q05979 453 aa3.31□□□□□ -1.88
SOD1YJR104C THI7Q05998 598 aa3.31□□□□□ -1.88
SOD1YJR104C YDL057WQ07379 328 aa3.31□□□□□ -1.88
SOD1YJR104C RRP40Q08285 240 aaKnown RBP3.31□□□□□ -1.88
SOD1YJR104C YDR215CQ12240 137 aa3.31□□□□□ -1.88
SOD1YJR104C YPR071WQ12346 211 aa3.31□□□□□ -1.88
SOD1YJR104C AGC1Q12482 902 aa3.31□□□□□ -1.88
SOD1YJR104C VMA9Q3E7B6 73 aa3.31□□□□□ -1.88
SOD1YJR104C ARG80P07249 177 aa3.3□□□□□ -1.88
SOD1YJR104C ALG7P07286 448 aa3.3□□□□□ -1.88
SOD1YJR104C RPC40P07703 335 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C NAM2P11325 894 aa3.3□□□□□ -1.88
SOD1YJR104C URA6P15700 204 aa3.3□□□□□ -1.88
SOD1YJR104C RPL8AP17076 256 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C SNF6P18888 332 aa3.3□□□□□ -1.88
SOD1YJR104C COX11P19516 300 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C CKS1P20486 150 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C IDP1P21954 428 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C RFA1P22336 621 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C MIR1P23641 311 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C YCL002CP25565 263 aa3.3□□□□□ -1.88
SOD1YJR104C TAH1P25638 111 aaPredicted RBP3.3□□□□□ -1.88
SOD1YJR104C URA10P30402 227 aa3.3□□□□□ -1.88
SOD1YJR104C MRP4P32902 394 aa3.3□□□□□ -1.88
SOD1YJR104C CTF13P35203 478 aa3.3□□□□□ -1.88
SOD1YJR104C SNU114P36048 1008 aaKnown RBP3.3□□□□□ -1.88
SOD1YJR104C SOL2P37262 315 aa3.3□□□□□ -1.88
SOD1YJR104C RRN10P38204 145 aa3.3□□□□□ -1.88
SOD1YJR104C BIT2P38346 545 aa3.3□□□□□ -1.88
SOD1YJR104C CKB2P38930 258 aa3.3□□□□□ -1.88
SOD1YJR104C SUR2P38992 349 aa3.3□□□□□ -1.88
SOD1YJR104C POP2P39008 433 aa3.3□□□□□ -1.88
SOD1YJR104C FLC2P39719 783 aa3.3□□□□□ -1.88
SOD1YJR104C LSM5P40089 93 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 82.9 ms