RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI3	YJL176C	UIP4	Q08926	304 aa		4.18	□□□□□ -1.74
SWI3	YJL176C	BTS1	Q12051	335 aa		4.18	□□□□□ -1.74
SWI3	YJL176C	COX17	Q12287	69 aa		4.18	□□□□□ -1.74
SWI3	YJL176C	GCN1	P33892	2672 aa	Known RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	CAR2	P07991	424 aa	Known RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	HAP4	P14064	554 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	TFS1	P14306	219 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	FAR1	P21268	830 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	UTR1	P21373	530 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	YKL077W	P36081	392 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	YKL071W	P36086	256 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	RPS20	P38701	121 aa	Known RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	FET3	P38993	636 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SWI3	YJL176C	NIT2	P47016	307 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	PRY1	P47032	299 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	YGL101W	P53144	215 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	RSA3	Q05942	220 aa	Known RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	SPC3	Q12133	184 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	RHO1	P06780	209 aa	Known RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	PEP4	P07267	405 aa	Known RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	PTC6	P25646	442 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	RPC82	P32349	654 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	MSN4	P33749	630 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	NIC96	P34077	839 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	MAE1	P36013	669 aa	Known RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	LHS1	P36016	881 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	MGE1	P38523	228 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	SBE22	P38814	852 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	YRB2	P40517	327 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	EXG2	P52911	562 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	YGR126W	P53274	230 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	SNF12	P53628	566 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	MPP6	P53725	186 aa	Predicted RBP	4.17	□□□□□ -1.74
SWI3	YJL176C	YDL007C-A	Q2V2Q0	85 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	MHF1	Q3E835	90 aa		4.17	□□□□□ -1.74
SWI3	YJL176C	YAL064W-B	O13512	126 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	TPK3	P05986	398 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	DPM1	P14020	267 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	MDH2	P22133	377 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	CYS4	P32582	507 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	RRG9	P40156	214 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	XBP1	P40489	647 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	LYS5	P50113	272 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	SCY1	P53009	804 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	COG5	P53951	403 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	ASI1	P54074	624 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	SMP3	Q04174	516 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	EMG1	Q06287	252 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	GRE1	Q08969	168 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	YOR343C	Q12484	108 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	SET6	Q12529	373 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	PRE2	P30656	287 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	AHP1	P38013	176 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	CHK1	P38147	527 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	ECM8	P38246	354 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	RPP1	P38786	293 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	GDI1	P39958	451 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	ISC1	P40015	477 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	YTA6	P40328	754 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	RFC4	P40339	323 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	IRC7	P43623	340 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	HMS2	P47175	358 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	HSV2	P50079	448 aa	Predicted RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	ALG12	P53730	551 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	YNL092W	P53934	400 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	SCS7	Q03529	384 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	MRPL1	Q04599	285 aa		4.16	□□□□□ -1.74
SWI3	YJL176C	VBA4	Q04602	768 aa	Known RBP	4.16	□□□□□ -1.74
SWI3	YJL176C	RPB8	P20436	146 aa		4.15	□□□□□ -1.74
SWI3	YJL176C	SSE2	P32590	693 aa	Known RBP	4.15	□□□□□ -1.74
SWI3	YJL176C	YBR138C	P38277	524 aa		4.15	□□□□□ -1.74
SWI3	YJL176C	ARN2	P38724	620 aa		4.15	□□□□□ -1.74
SWI3	YJL176C	KRE29	P40026	464 aa		4.15	□□□□□ -1.74
SWI3	YJL176C	POP1	P41812	875 aa		4.15	□□□□□ -1.74
SWI3	YJL176C	YPR147C	Q06522	304 aa	Known RBP	4.15	□□□□□ -1.74
SWI3	YJL176C	NIP7	Q08962	181 aa	Known RBP	4.15	□□□□□ -1.74
SWI3	YJL176C	RTC2	P38279	296 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	RIX1	P38883	763 aa	Predicted RBP	4.15	□□□□□ -1.75
SWI3	YJL176C	ECM1	P39715	212 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	STB1	P42845	420 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	SWP82	P43554	623 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	MSY1	P48527	492 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	SAM37	P50110	327 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	SOK2	P53438	785 aa	Predicted RBP	4.15	□□□□□ -1.75
SWI3	YJL176C	PLB2	Q03674	706 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	YMD8	Q03697	442 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	SPC19	Q03954	165 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	ELP6	Q04868	273 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	MLC2	Q06580	163 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	HRT1	Q08273	121 aa		4.15	□□□□□ -1.75
SWI3	YJL176C	SAM35	P14693	329 aa		4.14	□□□□□ -1.75
SWI3	YJL176C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SWI3	YJL176C	COS9	P36034	407 aa		4.14	□□□□□ -1.75
SWI3	YJL176C	YMR262W	P38430	313 aa		4.14	□□□□□ -1.75
SWI3	YJL176C	CHS7	P38843	316 aa		4.14	□□□□□ -1.75
SWI3	YJL176C	CHL4	P38907	458 aa		4.14	□□□□□ -1.75
SWI3	YJL176C	MLH1	P38920	769 aa		4.14	□□□□□ -1.75
SWI3	YJL176C	BRR6	P53062	197 aa		4.14	□□□□□ -1.75
SWI3	YJL176C	YNR040W	P53736	256 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms