RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C PCH2P38126 564 aa2.61□□□□□ -1.99
CTK2YJL006C IML3P38265 245 aa2.61□□□□□ -1.99
CTK2YJL006C PRP39P39682 629 aaKnown RBP2.61□□□□□ -1.99
CTK2YJL006C YER184CP39961 794 aa2.61□□□□□ -1.99
CTK2YJL006C RRT13P40042 185 aa2.61□□□□□ -1.99
CTK2YJL006C RPN6Q12377 434 aa2.61□□□□□ -1.99
CTK2YJL006C RGS2Q99188 309 aa2.61□□□□□ -1.99
CTK2YJL006C ESC1Q03661 1658 aaKnown RBP2.6□□□□□ -1.99
CTK2YJL006C RPS19AP07280 144 aaKnown RBP2.6□□□□□ -1.99
CTK2YJL006C RPS19BP07281 144 aaPredicted RBP2.6□□□□□ -1.99
CTK2YJL006C BGL2P15703 313 aaKnown RBP2.6□□□□□ -1.99
CTK2YJL006C CIN8P27895 1000 aa2.6□□□□□ -1.99
CTK2YJL006C GGC1P38988 300 aa2.6□□□□□ -1.99
CTK2YJL006C BTT1P40314 149 aaPredicted RBP2.6□□□□□ -1.99
CTK2YJL006C NAS6P50086 228 aa2.6□□□□□ -1.99
CTK2YJL006C YGL114WP53134 725 aa2.6□□□□□ -1.99
CTK2YJL006C YNL146WP53906 100 aa2.6□□□□□ -1.99
CTK2YJL006C SED5Q01590 340 aa2.6□□□□□ -1.99
CTK2YJL006C YDR286CQ05530 114 aa2.6□□□□□ -1.99
CTK2YJL006C PGC1Q08959 321 aa2.6□□□□□ -1.99
CTK2YJL006C TAF10Q12030 206 aa2.6□□□□□ -1.99
CTK2YJL006C DNF2Q12675 1612 aa2.6□□□□□ -1.99
CTK2YJL006C NTE1Q04958 1679 aa2.6□□□□□ -1.99
CTK2YJL006C MET5P47169 1442 aa2.59□□□□□ -1.99
CTK2YJL006C RPO31P04051 1460 aa2.59□□□□□ -1.99
CTK2YJL006C HSL1P34244 1518 aa2.59□□□□□ -1.99
CTK2YJL006C TOR1P35169 2470 aa2.59□□□□□ -1.99
CTK2YJL006C MYO3P36006 1272 aa2.59□□□□□ -1.99
CTK2YJL006C YKL071WP36086 256 aa2.59□□□□□ -1.99
CTK2YJL006C LIN1P38852 340 aaPredicted RBP2.59□□□□□ -1.99
CTK2YJL006C COQ5P49017 307 aa2.59□□□□□ -1.99
CTK2YJL006C DDC1Q08949 612 aa2.59□□□□□ -1.99
CTK2YJL006C PRM7Q12459 698 aa2.59□□□□□ -1.99
CTK2YJL006C GEA2P39993 1459 aaKnown RBP2.58□□□□□ -2
CTK2YJL006C OPI1P21957 404 aa2.58□□□□□ -2
CTK2YJL006C ZIP1P31111 875 aa2.58□□□□□ -2
CTK2YJL006C TIP20P33891 701 aa2.58□□□□□ -2
CTK2YJL006C EFM1P38732 585 aa2.58□□□□□ -2
CTK2YJL006C FHL1P39521 936 aa2.58□□□□□ -2
CTK2YJL006C YFR018CP43599 363 aa2.58□□□□□ -2
CTK2YJL006C API2Q04413 109 aa2.58□□□□□ -2
CTK2YJL006C RPN8Q08723 338 aaKnown RBP2.58□□□□□ -2
CTK2YJL006C RFM1Q12192 310 aa2.58□□□□□ -2
CTK2YJL006C YDR262WQ12331 272 aa2.58□□□□□ -2
CTK2YJL006C SPO24Q3E752 67 aa2.58□□□□□ -2
CTK2YJL006C YAL067W-AQ8TGK6 75 aa2.58□□□□□ -2
CTK2YJL006C TAF2P23255 1407 aa2.58□□□□□ -2
CTK2YJL006C THO2P53552 1597 aaKnown RBP2.57□□□□□ -2
CTK2YJL006C SAL1D6W196 494 aa2.57□□□□□ -2
CTK2YJL006C RAD23P32628 398 aaKnown RBP2.57□□□□□ -2
CTK2YJL006C DBP7P36120 742 aaKnown RBP2.57□□□□□ -2
CTK2YJL006C SHE4P51534 789 aa2.57□□□□□ -2
CTK2YJL006C FAR10Q06001 478 aa2.57□□□□□ -2
CTK2YJL006C SPH1Q06160 661 aa2.57□□□□□ -2
CTK2YJL006C YOL029CQ08187 201 aa2.57□□□□□ -2
CTK2YJL006C MMT2Q08970 484 aa2.57□□□□□ -2
CTK2YJL006C YCF1P39109 1515 aaKnown RBP2.57□□□□□ -2
CTK2YJL006C RNR2P09938 399 aaKnown RBP2.56□□□□□ -2
CTK2YJL006C FUS3P16892 353 aaKnown RBP2.56□□□□□ -2
CTK2YJL006C TPM1P17536 199 aaKnown RBP2.56□□□□□ -2
CTK2YJL006C FMT1P32785 401 aa2.56□□□□□ -2
CTK2YJL006C TAE1P38340 232 aa2.56□□□□□ -2
CTK2YJL006C SMF2P38778 549 aa2.56□□□□□ -2
CTK2YJL006C TAF6P53040 516 aa2.56□□□□□ -2
CTK2YJL006C PXR1P53335 271 aaPredicted RBP2.56□□□□□ -2
CTK2YJL006C HCH1P53834 153 aa2.56□□□□□ -2
CTK2YJL006C YDR018CQ12185 396 aa2.56□□□□□ -2
CTK2YJL006C AUS1Q08409 1394 aa2.56□□□□□ -2
CTK2YJL006C REP1P03871 373 aa2.55□□□□□ -2
CTK2YJL006C RBK1P25332 333 aa2.55□□□□□ -2
CTK2YJL006C VMA5P31412 392 aaKnown RBP2.55□□□□□ -2
CTK2YJL006C BUD4P47136 1447 aa2.55□□□□□ -2
CTK2YJL006C TPC1P53257 314 aa2.55□□□□□ -2
CTK2YJL006C HST4P53688 370 aa2.55□□□□□ -2
CTK2YJL006C NRM1P53718 249 aa2.55□□□□□ -2
CTK2YJL006C MRX8Q05473 314 aa2.55□□□□□ -2
CTK2YJL006C TCB3Q03640 1545 aaKnown RBP2.54□□□□□ -2
CTK2YJL006C VPS63O13549 108 aa2.54□□□□□ -2
CTK2YJL006C RPL18AP0CX49 186 aaKnown RBP2.54□□□□□ -2
CTK2YJL006C RPL18BP0CX50 186 aaKnown RBP2.54□□□□□ -2
CTK2YJL006C GAL3P13045 520 aa2.54□□□□□ -2
CTK2YJL006C VMA2P16140 517 aaKnown RBP2.54□□□□□ -2
CTK2YJL006C ITR2P30606 609 aa2.54□□□□□ -2
CTK2YJL006C TPS2P31688 896 aaKnown RBP2.54□□□□□ -2
CTK2YJL006C ACB1P31787 87 aa2.54□□□□□ -2
CTK2YJL006C KTI12P34253 313 aaKnown RBP2.54□□□□□ -2
CTK2YJL006C FRM2P37261 193 aa2.54□□□□□ -2
CTK2YJL006C UFE1P41834 346 aa2.54□□□□□ -2
CTK2YJL006C APC4Q04601 652 aa2.54□□□□□ -2
CTK2YJL006C MHP1P43638 1398 aa2.53□□□□□ -2
CTK2YJL006C CTA1P15202 515 aa2.53□□□□□ -2
CTK2YJL006C CYM1P32898 989 aa2.53□□□□□ -2
CTK2YJL006C CBF5P33322 483 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
CTK2YJL006C SRB2P34162 210 aa2.53□□□□□ -2
CTK2YJL006C TRR2P38816 342 aa2.53□□□□□ -2
CTK2YJL006C FRT2P39734 528 aa2.53□□□□□ -2
CTK2YJL006C PFS2P42841 465 aaKnown RBP2.53□□□□□ -2
CTK2YJL006C RVB1Q03940 463 aaKnown RBP2.53□□□□□ -2
CTK2YJL006C STE23Q06010 1027 aa2.53□□□□□ -2
CTK2YJL006C MRX9Q07349 420 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms