RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YFH7P43591 353 aa2.32□□□□□ -2.04
TRA1YHR099W IMD3P50095 523 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W PEX12Q04370 399 aa2.32□□□□□ -2.04
TRA1YHR099W YML083CQ04526 418 aa2.32□□□□□ -2.04
TRA1YHR099W ARV1Q06541 321 aa2.32□□□□□ -2.04
TRA1YHR099W RSC58Q07979 502 aa2.32□□□□□ -2.04
TRA1YHR099W YPL150WQ12152 901 aa2.32□□□□□ -2.04
TRA1YHR099W PDR11P40550 1411 aa2.32□□□□□ -2.04
TRA1YHR099W MSS18P08593 268 aa2.32□□□□□ -2.04
TRA1YHR099W RDS2P19541 446 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W NFS1P25374 497 aa2.32□□□□□ -2.04
TRA1YHR099W YCR090CP25654 182 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W MTH1P35198 433 aa2.32□□□□□ -2.04
TRA1YHR099W FAD1P38913 306 aa2.32□□□□□ -2.04
TRA1YHR099W AIM2P39721 246 aa2.32□□□□□ -2.04
TRA1YHR099W RPH1P39956 796 aa2.32□□□□□ -2.04
TRA1YHR099W PRM8P53174 237 aa2.32□□□□□ -2.04
TRA1YHR099W YAT1P80235 687 aa2.32□□□□□ -2.04
TRA1YHR099W RSM28Q03430 361 aa2.32□□□□□ -2.04
TRA1YHR099W YPR196WQ06595 470 aa2.32□□□□□ -2.04
TRA1YHR099W ATG10Q07879 167 aa2.32□□□□□ -2.04
TRA1YHR099W COQ10Q08058 207 aa2.32□□□□□ -2.04
TRA1YHR099W TPK2P06245 380 aa2.32□□□□□ -2.04
TRA1YHR099W RPS18AP0CX55 146 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W RPS18BP0CX56 146 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W GPI12P23797 304 aa2.32□□□□□ -2.04
TRA1YHR099W GFD2P25370 566 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W DOA4P32571 926 aa2.32□□□□□ -2.04
TRA1YHR099W APE3P37302 537 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W YBR056WP38081 501 aa2.32□□□□□ -2.04
TRA1YHR099W PRS3P38689 320 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W JHD1P40034 492 aa2.32□□□□□ -2.04
TRA1YHR099W KEG1P43614 200 aa2.32□□□□□ -2.04
TRA1YHR099W YPL034WQ03083 165 aa2.32□□□□□ -2.04
TRA1YHR099W GOT1Q03554 138 aa2.32□□□□□ -2.04
TRA1YHR099W PHM6Q05637 104 aa2.32□□□□□ -2.04
TRA1YHR099W DIC1Q06143 298 aa2.32□□□□□ -2.04
TRA1YHR099W YFH1Q07540 174 aa2.32□□□□□ -2.04
TRA1YHR099W YPL162CQ12042 273 aa2.32□□□□□ -2.04
TRA1YHR099W RPL30P14120 105 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W FAA1P30624 700 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W TAT1P38085 619 aa2.32□□□□□ -2.04
TRA1YHR099W TEM1P38987 245 aa2.32□□□□□ -2.04
TRA1YHR099W FAA2P39518 744 aa2.32□□□□□ -2.04
TRA1YHR099W PRP39P39682 629 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W PFA3P42836 336 aa2.32□□□□□ -2.04
TRA1YHR099W TRM9P49957 279 aa2.32□□□□□ -2.04
TRA1YHR099W ACS2P52910 683 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W PUS2P53167 370 aa2.32□□□□□ -2.04
TRA1YHR099W SHY1P53266 389 aa2.32□□□□□ -2.04
TRA1YHR099W CUS2P53830 285 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W ACT1P60010 375 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W MET14Q02196 202 aa2.32□□□□□ -2.04
TRA1YHR099W FRK1Q03002 865 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W YMR178WQ03219 274 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W YOR283WQ12040 230 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W RIB2Q12362 591 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W RTR2Q12378 196 aa2.32□□□□□ -2.04
TRA1YHR099W MRP13P12686 339 aa2.31□□□□□ -2.04
TRA1YHR099W TCD2P36101 447 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W ABZ1P37254 787 aaPredicted RBP2.31□□□□□ -2.04
TRA1YHR099W PTC4P38089 393 aa2.31□□□□□ -2.04
TRA1YHR099W CDS1P38221 457 aa2.31□□□□□ -2.04
TRA1YHR099W GAA1P39012 614 aa2.31□□□□□ -2.04
TRA1YHR099W IRC15Q02733 499 aa2.31□□□□□ -2.04
TRA1YHR099W PNP1Q05788 311 aa2.31□□□□□ -2.04
TRA1YHR099W SEI1Q06058 285 aa2.31□□□□□ -2.04
TRA1YHR099W MCH5Q08777 521 aa2.31□□□□□ -2.04
TRA1YHR099W TPK3P05986 398 aa2.31□□□□□ -2.04
TRA1YHR099W ATR1P13090 542 aa2.31□□□□□ -2.04
TRA1YHR099W CDC43P18898 376 aa2.31□□□□□ -2.04
TRA1YHR099W EHD3P28817 500 aa2.31□□□□□ -2.04
TRA1YHR099W BEM1P29366 551 aa2.31□□□□□ -2.04
TRA1YHR099W PUB1P32588 453 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
TRA1YHR099W PEX2P32800 271 aa2.31□□□□□ -2.04
TRA1YHR099W DOA1P36037 715 aa2.31□□□□□ -2.04
TRA1YHR099W DBP7P36120 742 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W RRT2P38332 387 aa2.31□□□□□ -2.04
TRA1YHR099W SHU1P38751 150 aa2.31□□□□□ -2.04
TRA1YHR099W LSM4P40070 187 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W TAD1P53065 400 aa2.31□□□□□ -2.04
TRA1YHR099W VPS62P53285 467 aa2.31□□□□□ -2.04
TRA1YHR099W MSC3Q05812 728 aa2.31□□□□□ -2.04
TRA1YHR099W SAM4Q08985 325 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W AGC1Q12482 902 aa2.31□□□□□ -2.04
TRA1YHR099W YBR126W-AQ8TGU7 68 aa2.31□□□□□ -2.04
TRA1YHR099W SEC53P07283 254 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W MPH3P0CE00 602 aa2.31□□□□□ -2.04
TRA1YHR099W UTR1P21373 530 aa2.31□□□□□ -2.04
TRA1YHR099W RNR3P21672 869 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W RFA3P26755 122 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W RRP4P38792 359 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W PPE1P38796 400 aa2.31□□□□□ -2.04
TRA1YHR099W YHR182WP38870 785 aa2.31□□□□□ -2.04
TRA1YHR099W YNL217WP40152 326 aa2.31□□□□□ -2.04
TRA1YHR099W ARE2P53629 642 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W ELP6Q04868 273 aa2.31□□□□□ -2.04
TRA1YHR099W ECM3Q99252 613 aa2.31□□□□□ -2.04
TRA1YHR099W DUR1,2P32528 1835 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W HKR1P41809 1802 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms