RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C NTH1P32356 751 aa5.34□□□□□ -1.55
SFB3YHR098C YBR013CP38215 129 aa5.34□□□□□ -1.55
SFB3YHR098C VID24P38263 362 aa5.34□□□□□ -1.55
SFB3YHR098C PHO88P38264 188 aaPredicted RBP5.34□□□□□ -1.55
SFB3YHR098C ARP1P38696 384 aa5.34□□□□□ -1.55
SFB3YHR098C SSU1P41930 458 aa5.34□□□□□ -1.55
SFB3YHR098C PRM10P42946 383 aa5.34□□□□□ -1.55
SFB3YHR098C PMT4P46971 762 aa5.34□□□□□ -1.55
SFB3YHR098C ARG5,6Q01217 863 aa5.34□□□□□ -1.55
SFB3YHR098C JIP4Q03361 876 aa5.34□□□□□ -1.55
SFB3YHR098C PEX29Q03370 554 aa5.34□□□□□ -1.55
SFB3YHR098C SMA2Q04658 369 aa5.34□□□□□ -1.55
SFB3YHR098C MRI1Q06489 411 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C ANT1Q06497 328 aa5.34□□□□□ -1.55
SFB3YHR098C ATX2Q12067 313 aa5.34□□□□□ -1.55
SFB3YHR098C YPL245WQ12179 454 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C YOR114WQ12219 294 aa5.34□□□□□ -1.55
SFB3YHR098C ERG27Q12452 347 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C Q0182Q9ZZW1 134 aa5.34□□□□□ -1.55
SFB3YHR098C AI1P03875 834 aa5.33□□□□□ -1.56
SFB3YHR098C RPP1BP10622 106 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C RER1P25560 188 aa5.33□□□□□ -1.56
SFB3YHR098C CYS3P31373 394 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C OAC1P32332 324 aa5.33□□□□□ -1.56
SFB3YHR098C DOA4P32571 926 aa5.33□□□□□ -1.56
SFB3YHR098C MRP21P38175 177 aa5.33□□□□□ -1.56
SFB3YHR098C VAB2P40003 282 aa5.33□□□□□ -1.56
SFB3YHR098C BUR6P40096 142 aa5.33□□□□□ -1.56
SFB3YHR098C SIP4P46954 829 aa5.33□□□□□ -1.56
SFB3YHR098C BIT61P47041 543 aa5.33□□□□□ -1.56
SFB3YHR098C BLS1Q06071 122 aa5.33□□□□□ -1.56
SFB3YHR098C PML1Q07930 204 aaPredicted RBP5.33□□□□□ -1.56
SFB3YHR098C RDI1Q12434 202 aa5.33□□□□□ -1.56
SFB3YHR098C AFI1Q99222 893 aa5.33□□□□□ -1.56
SFB3YHR098C PDX1P16451 410 aa5.33□□□□□ -1.56
SFB3YHR098C FAA1P30624 700 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C PRE4P30657 266 aa5.33□□□□□ -1.56
SFB3YHR098C CDC12P32468 407 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C HTD2P38790 280 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C YEL028WP39989 153 aa5.33□□□□□ -1.56
SFB3YHR098C PUG1P40100 303 aa5.33□□□□□ -1.56
SFB3YHR098C YJR111CP47148 283 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C SDT1P53078 280 aa5.33□□□□□ -1.56
SFB3YHR098C RUB1Q03919 77 aa5.33□□□□□ -1.56
SFB3YHR098C DPB4Q04603 196 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C YLR173WQ06247 608 aa5.33□□□□□ -1.56
SFB3YHR098C ATG41Q12048 136 aa5.33□□□□□ -1.56
SFB3YHR098C WTM2Q12206 467 aa5.33□□□□□ -1.56
SFB3YHR098C TIR4Q12218 487 aaPredicted RBP5.33□□□□□ -1.56
SFB3YHR098C RPN5Q12250 445 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C AHA1Q12449 350 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C PSF1Q12488 208 aa5.33□□□□□ -1.56
SFB3YHR098C LEU4P06208 619 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C UNG1P12887 359 aa5.33□□□□□ -1.56
SFB3YHR098C ERD1P16151 362 aa5.33□□□□□ -1.56
SFB3YHR098C GPT2P36148 743 aa5.33□□□□□ -1.56
SFB3YHR098C LDH1P38139 375 aa5.33□□□□□ -1.56
SFB3YHR098C TCM62P38228 572 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C MTC4P38335 694 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C YHR035WP38769 630 aa5.33□□□□□ -1.56
SFB3YHR098C ALP1P38971 573 aa5.33□□□□□ -1.56
SFB3YHR098C EAF5P39995 279 aa5.33□□□□□ -1.56
SFB3YHR098C YER010CP40011 234 aa5.33□□□□□ -1.56
SFB3YHR098C SWM2P40342 146 aa5.33□□□□□ -1.56
SFB3YHR098C FMC1P40491 155 aa5.33□□□□□ -1.56
SFB3YHR098C TOM22P49334 152 aa5.33□□□□□ -1.56
SFB3YHR098C SWC4P53201 476 aa5.33□□□□□ -1.56
SFB3YHR098C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SFB3YHR098C AAT1Q01802 451 aa5.33□□□□□ -1.56
SFB3YHR098C KIN4Q01919 800 aa5.33□□□□□ -1.56
SFB3YHR098C YMR265CQ03508 461 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C GSF2Q04697 403 aaKnown RBP5.33□□□□□ -1.56
SFB3YHR098C AGC1Q12482 902 aa5.33□□□□□ -1.56
SFB3YHR098C SFG1Q12507 346 aa5.33□□□□□ -1.56
SFB3YHR098C ERD2P18414 219 aa5.32□□□□□ -1.56
SFB3YHR098C YPK2P18961 677 aa5.32□□□□□ -1.56
SFB3YHR098C YIH1P25637 258 aa5.32□□□□□ -1.56
SFB3YHR098C MSN4P33749 630 aa5.32□□□□□ -1.56
SFB3YHR098C YPT52P36018 234 aaKnown RBP5.32□□□□□ -1.56
SFB3YHR098C TVP38P36164 337 aa5.32□□□□□ -1.56
SFB3YHR098C YBR063CP38083 404 aa5.32□□□□□ -1.56
SFB3YHR098C CHK1P38147 527 aa5.32□□□□□ -1.56
SFB3YHR098C POP2P39008 433 aa5.32□□□□□ -1.56
SFB3YHR098C HAT2P39984 401 aa5.32□□□□□ -1.56
SFB3YHR098C RPS10BP46784 105 aaKnown RBP5.32□□□□□ -1.56
SFB3YHR098C SNG1P46950 547 aa5.32□□□□□ -1.56
SFB3YHR098C AIM25P47140 327 aa5.32□□□□□ -1.56
SFB3YHR098C MTL1P53214 551 aa5.32□□□□□ -1.56
SFB3YHR098C SPC19Q03954 165 aa5.32□□□□□ -1.56
SFB3YHR098C RPS10AQ08745 105 aaPredicted RBP5.32□□□□□ -1.56
SFB3YHR098C YLR046CQ12253 270 aa5.32□□□□□ -1.56
SFB3YHR098C ZPS1Q12512 249 aa5.32□□□□□ -1.56
SFB3YHR098C YPR014CQ6B0W2 109 aa5.32□□□□□ -1.56
SFB3YHR098C SAM1P10659 382 aaKnown RBP5.32□□□□□ -1.56
SFB3YHR098C MRPL9P31334 269 aa5.32□□□□□ -1.56
SFB3YHR098C SUA5P32579 426 aa5.32□□□□□ -1.56
SFB3YHR098C YKU70P32807 602 aa5.32□□□□□ -1.56
SFB3YHR098C TGL1P34163 548 aa5.32□□□□□ -1.56
SFB3YHR098C GND1P38720 489 aaKnown RBP5.32□□□□□ -1.56
SFB3YHR098C YEL068CP39977 110 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms