RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W YDL177CQ12257 170 aa13.86□□□□□ -0.19
RTC3YHR087W YOL114CQ12322 202 aa13.86□□□□□ -0.19
RTC3YHR087W YEL009C-AA0A023PZF2 135 aa13.85□□□□□ -0.19
RTC3YHR087W AHC2P25649 128 aa13.85□□□□□ -0.19
RTC3YHR087W TAF14P35189 244 aa13.85□□□□□ -0.19
RTC3YHR087W RRP4P38792 359 aaKnown RBP13.85□□□□□ -0.19
RTC3YHR087W IPI1P38803 334 aaPredicted RBP13.85□□□□□ -0.19
RTC3YHR087W VPS52P39904 641 aa13.85□□□□□ -0.19
RTC3YHR087W FRE5Q08908 694 aa13.85□□□□□ -0.19
RTC3YHR087W YDL176WQ12027 708 aa13.85□□□□□ -0.19
RTC3YHR087W REX3Q12090 404 aa13.85□□□□□ -0.19
RTC3YHR087W PSF1Q12488 208 aa13.85□□□□□ -0.19
RTC3YHR087W SFG1Q12507 346 aa13.85□□□□□ -0.19
RTC3YHR087W SUS1Q6WNK7 96 aa13.85□□□□□ -0.19
RTC3YHR087W PBS2P08018 668 aa13.84□□□□□ -0.19
RTC3YHR087W RPL20AP0CX23 172 aaKnown RBP13.84□□□□□ -0.19
RTC3YHR087W RPL20BP0CX24 172 aaPredicted RBP13.84□□□□□ -0.19
RTC3YHR087W ERD2P18414 219 aa13.84□□□□□ -0.19
RTC3YHR087W TIM12P32830 109 aa13.84□□□□□ -0.19
RTC3YHR087W ECT1P33412 323 aa13.84□□□□□ -0.19
RTC3YHR087W FMC1P40491 155 aa13.84□□□□□ -0.19
RTC3YHR087W YIL067CP40514 678 aa13.84□□□□□ -0.19
RTC3YHR087W HIS6P40545 261 aa13.84□□□□□ -0.19
RTC3YHR087W TDA1Q03533 586 aa13.84□□□□□ -0.19
RTC3YHR087W DML1Q03652 475 aa13.84□□□□□ -0.19
RTC3YHR087W SIZ1Q04195 904 aa13.84□□□□□ -0.19
RTC3YHR087W GPN3Q06543 272 aa13.84□□□□□ -0.19
RTC3YHR087W CAP2P13517 287 aa13.83□□□□□ -0.2
RTC3YHR087W GPI12P23797 304 aa13.83□□□□□ -0.2
RTC3YHR087W FPS1P23900 669 aa13.83□□□□□ -0.2
RTC3YHR087W PUB1P32588 453 aaKnown RBP RIP-Chip data13.83□□□□□ -0.2not detected
RTC3YHR087W YEF1P32622 495 aa13.83□□□□□ -0.2
RTC3YHR087W JEN1P36035 616 aa13.83□□□□□ -0.2
RTC3YHR087W CIN1P40987 1014 aa13.83□□□□□ -0.2
RTC3YHR087W YMR210WQ03649 449 aa13.83□□□□□ -0.2
RTC3YHR087W SNO4Q04902 237 aa13.83□□□□□ -0.2
RTC3YHR087W PEX27Q08580 376 aa13.83□□□□□ -0.2
RTC3YHR087W HSP33Q08914 237 aaKnown RBP13.83□□□□□ -0.2
RTC3YHR087W RKM1Q08961 583 aaPredicted RBP13.83□□□□□ -0.2
RTC3YHR087W HSP32Q08992 237 aa13.83□□□□□ -0.2
RTC3YHR087W RTN2Q12443 393 aa13.83□□□□□ -0.2
RTC3YHR087W QCR7P00128 127 aa13.82□□□□□ -0.2
RTC3YHR087W AI4P03878 556 aa13.82□□□□□ -0.2
RTC3YHR087W SIR2P06700 562 aa13.82□□□□□ -0.2
RTC3YHR087W HMG1P12683 1054 aa13.82□□□□□ -0.2
RTC3YHR087W YCR006CP25350 157 aa13.82□□□□□ -0.2
RTC3YHR087W STP22P25604 385 aa13.82□□□□□ -0.2
RTC3YHR087W NIC96P34077 839 aa13.82□□□□□ -0.2
RTC3YHR087W RCN1P36054 211 aa13.82□□□□□ -0.2
RTC3YHR087W MRH4P53166 561 aa13.82□□□□□ -0.2
RTC3YHR087W RRN9P53437 365 aa13.82□□□□□ -0.2
RTC3YHR087W RGC1Q06108 1083 aaKnown RBP13.82□□□□□ -0.2
RTC3YHR087W NBA1Q08229 501 aaKnown RBP13.82□□□□□ -0.2
RTC3YHR087W TY1A-NL1Q12391 440 aaKnown RBP13.82□□□□□ -0.2
RTC3YHR087W CCZ1P38273 704 aa13.81□□□□□ -0.2
RTC3YHR087W SKN7P38889 622 aa13.81□□□□□ -0.2
RTC3YHR087W RTT105P40063 208 aa13.81□□□□□ -0.2
RTC3YHR087W ALK1P43633 760 aaKnown RBP13.81□□□□□ -0.2
RTC3YHR087W IMO32P53219 342 aa13.81□□□□□ -0.2
RTC3YHR087W HDA2Q06629 674 aa13.81□□□□□ -0.2
RTC3YHR087W FRE6Q12473 712 aa13.81□□□□□ -0.2
RTC3YHR087W GCN3P14741 305 aa13.8□□□□□ -0.2
RTC3YHR087W SAC7P17121 654 aa13.8□□□□□ -0.2
RTC3YHR087W MKK2P32491 506 aa13.8□□□□□ -0.2
RTC3YHR087W MDL1P33310 695 aa13.8□□□□□ -0.2
RTC3YHR087W GPX1P36014 167 aa13.8□□□□□ -0.2
RTC3YHR087W YKL071WP36086 256 aa13.8□□□□□ -0.2
RTC3YHR087W DTR1P38125 572 aa13.8□□□□□ -0.2
RTC3YHR087W NAB3P38996 802 aaKnown RBP RIP-Chip data13.8□□□□□ -0.2not detected
RTC3YHR087W BUD9P53226 547 aa13.8□□□□□ -0.2
RTC3YHR087W PAU12P53343 120 aa13.8□□□□□ -0.2
RTC3YHR087W YLR460CP54007 376 aa13.8□□□□□ -0.2
RTC3YHR087W TPP1Q03796 238 aa13.8□□□□□ -0.2
RTC3YHR087W YSF3P0C074 85 aaPredicted RBP13.79□□□□□ -0.2
RTC3YHR087W FAA1P30624 700 aaKnown RBP13.79□□□□□ -0.2
RTC3YHR087W YIL165CP40446 119 aa13.79□□□□□ -0.2
RTC3YHR087W LEM3P42838 414 aa13.79□□□□□ -0.2
RTC3YHR087W ATG18P43601 500 aa13.79□□□□□ -0.2
RTC3YHR087W MDV1P47025 714 aa13.79□□□□□ -0.2
RTC3YHR087W YJR141WP47172 347 aaPredicted RBP13.79□□□□□ -0.2
RTC3YHR087W TRM9P49957 279 aa13.79□□□□□ -0.2
RTC3YHR087W YGR067CP53243 804 aa13.79□□□□□ -0.2
RTC3YHR087W YNR062CP53748 327 aa13.79□□□□□ -0.2
RTC3YHR087W PFA5Q03289 374 aa13.79□□□□□ -0.2
RTC3YHR087W ERF2Q06551 359 aa13.79□□□□□ -0.2
RTC3YHR087W AVO1Q08236 1176 aa13.79□□□□□ -0.2
RTC3YHR087W YPK2P18961 677 aa13.78□□□□□ -0.2
RTC3YHR087W NAR1P23503 491 aaKnown RBP13.78□□□□□ -0.2
RTC3YHR087W EXG1P23776 448 aaKnown RBP13.78□□□□□ -0.2
RTC3YHR087W TRS65P32893 560 aa13.78□□□□□ -0.2
RTC3YHR087W MSN4P33749 630 aa13.78□□□□□ -0.2
RTC3YHR087W RPP1P38786 293 aa13.78□□□□□ -0.2
RTC3YHR087W NSG1P38837 291 aa13.78□□□□□ -0.2
RTC3YHR087W MIT1P40002 666 aa13.78□□□□□ -0.2
RTC3YHR087W IRC18P47056 224 aa13.78□□□□□ -0.2
RTC3YHR087W MSE1P48525 536 aa13.78□□□□□ -0.2
RTC3YHR087W RRG7Q08774 242 aaPredicted RBP13.78□□□□□ -0.2
RTC3YHR087W YDL109CQ12103 647 aa13.78□□□□□ -0.2
RTC3YHR087W NPC2Q12408 173 aa13.78□□□□□ -0.2
RTC3YHR087W SET6Q12529 373 aa13.78□□□□□ -0.2
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms