RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W PGU1P47180 361 aa6.13□□□□□ -1.43
NUP49YGL172W ECL1P48235 211 aa6.13□□□□□ -1.43
NUP49YGL172W HOL1P53389 586 aa6.13□□□□□ -1.43
NUP49YGL172W COS1P53822 381 aa6.13□□□□□ -1.43
NUP49YGL172W ATG4P53867 494 aa6.13□□□□□ -1.43
NUP49YGL172W YSA1Q01976 231 aa6.13□□□□□ -1.43
NUP49YGL172W ENB1Q08299 606 aa6.13□□□□□ -1.43
NUP49YGL172W TMS1Q12116 473 aa6.13□□□□□ -1.43
NUP49YGL172W DBP10Q12389 995 aaKnown RBP6.13□□□□□ -1.43
NUP49YGL172W MHF1Q3E835 90 aa6.13□□□□□ -1.43
NUP49YGL172W DFG16Q99234 619 aa6.13□□□□□ -1.43
NUP49YGL172W YOL162WP0CF19 215 aa6.12□□□□□ -1.43
NUP49YGL172W FAR1P21268 830 aa6.12□□□□□ -1.43
NUP49YGL172W SNC1P31109 117 aa6.12□□□□□ -1.43
NUP49YGL172W PRP19P32523 503 aaKnown RBP6.12□□□□□ -1.43
NUP49YGL172W TIM12P32830 109 aa6.12□□□□□ -1.43
NUP49YGL172W ECM15P35195 104 aa6.12□□□□□ -1.43
NUP49YGL172W MOH1P38191 138 aa6.12□□□□□ -1.43
NUP49YGL172W RRP4P38792 359 aaKnown RBP6.12□□□□□ -1.43
NUP49YGL172W SBE22P38814 852 aa6.12□□□□□ -1.43
NUP49YGL172W YHR180WP38868 163 aa6.12□□□□□ -1.43
NUP49YGL172W PDS1P40316 373 aaPredicted RBP6.12□□□□□ -1.43
NUP49YGL172W YIL166CP40445 542 aa6.12□□□□□ -1.43
NUP49YGL172W AAD14P42884 376 aa6.12□□□□□ -1.43
NUP49YGL172W RBG2P53295 368 aaKnown RBP6.12□□□□□ -1.43
NUP49YGL172W SNF12P53628 566 aa6.12□□□□□ -1.43
NUP49YGL172W PDR16P53860 351 aaKnown RBP6.12□□□□□ -1.43
NUP49YGL172W ABZ2Q03266 374 aa6.12□□□□□ -1.43
NUP49YGL172W YDR249CQ03787 373 aa6.12□□□□□ -1.43
NUP49YGL172W SNX41Q04053 625 aa6.12□□□□□ -1.43
NUP49YGL172W SMP3Q04174 516 aa6.12□□□□□ -1.43
NUP49YGL172W PLM2Q04383 521 aa6.12□□□□□ -1.43
NUP49YGL172W SYO1Q07395 620 aa6.12□□□□□ -1.43
NUP49YGL172W AVO1Q08236 1176 aa6.12□□□□□ -1.43
NUP49YGL172W YDL109CQ12103 647 aa6.12□□□□□ -1.43
NUP49YGL172W MCP1Q12106 302 aa6.12□□□□□ -1.43
NUP49YGL172W SPC3Q12133 184 aa6.12□□□□□ -1.43
NUP49YGL172W CAR2P07991 424 aaKnown RBP6.11□□□□□ -1.43
NUP49YGL172W YHR214C-DP0CX93 97 aa6.11□□□□□ -1.43
NUP49YGL172W SNF6P18888 332 aa6.11□□□□□ -1.43
NUP49YGL172W YPK2P18961 677 aa6.11□□□□□ -1.43
NUP49YGL172W PRP28P23394 588 aa6.11□□□□□ -1.43
NUP49YGL172W HSP30P25619 332 aa6.11□□□□□ -1.43
NUP49YGL172W SSE2P32590 693 aaKnown RBP6.11□□□□□ -1.43
NUP49YGL172W YBR138CP38277 524 aa6.11□□□□□ -1.43
NUP49YGL172W APD1P38281 316 aa6.11□□□□□ -1.43
NUP49YGL172W YBR285WP38354 144 aa6.11□□□□□ -1.43
NUP49YGL172W SKN7P38889 622 aa6.11□□□□□ -1.43
NUP49YGL172W ALP1P38971 573 aa6.11□□□□□ -1.43
NUP49YGL172W PTI1P39927 425 aaPredicted RBP6.11□□□□□ -1.43
NUP49YGL172W RRG9P40156 214 aa6.11□□□□□ -1.43
NUP49YGL172W GVP36P40531 326 aaKnown RBP6.11□□□□□ -1.43
NUP49YGL172W HXT9P40885 567 aa6.11□□□□□ -1.43
NUP49YGL172W SWP82P43554 623 aa6.11□□□□□ -1.43
NUP49YGL172W CHA4P43634 648 aa6.11□□□□□ -1.43
NUP49YGL172W PPT1P53043 513 aa6.11□□□□□ -1.43
NUP49YGL172W PBP1P53297 722 aaKnown RBP6.11□□□□□ -1.43
NUP49YGL172W YNR062CP53748 327 aa6.11□□□□□ -1.43
NUP49YGL172W HXT11P54862 567 aa6.11□□□□□ -1.43
NUP49YGL172W BUR2Q05949 395 aa6.11□□□□□ -1.43
NUP49YGL172W RDR1Q08904 546 aa6.11□□□□□ -1.43
NUP49YGL172W YDL007C-AQ2V2Q0 85 aa6.11□□□□□ -1.43
NUP49YGL172W GLT1Q12680 2145 aaKnown RBP6.1□□□□□ -1.43
NUP49YGL172W IPP1P00817 287 aaKnown RBP6.1□□□□□ -1.43
NUP49YGL172W TPK3P05986 398 aa6.1□□□□□ -1.43
NUP49YGL172W YFR010W-AP0C5N0 62 aa6.1□□□□□ -1.43
NUP49YGL172W ADH7P25377 361 aa6.1□□□□□ -1.43
NUP49YGL172W JEN1P36035 616 aa6.1□□□□□ -1.43
NUP49YGL172W YER010CP40011 234 aa6.1□□□□□ -1.43
NUP49YGL172W MPH1P40562 993 aa6.1□□□□□ -1.43
NUP49YGL172W REE1P40893 198 aa6.1□□□□□ -1.43
NUP49YGL172W YGL235WP53071 178 aa6.1□□□□□ -1.43
NUP49YGL172W COG5P53951 403 aa6.1□□□□□ -1.43
NUP49YGL172W ASI1P54074 624 aa6.1□□□□□ -1.43
NUP49YGL172W YMD8Q03697 442 aa6.1□□□□□ -1.43
NUP49YGL172W SEC13Q04491 297 aaKnown RBP6.1□□□□□ -1.43
NUP49YGL172W COX20Q04935 205 aa6.1□□□□□ -1.43
NUP49YGL172W CDA2Q06703 312 aa6.1□□□□□ -1.43
NUP49YGL172W YPL191CQ08930 360 aa6.1□□□□□ -1.43
NUP49YGL172W YPL272CQ08984 517 aa6.1□□□□□ -1.43
NUP49YGL172W BTS1Q12051 335 aa6.1□□□□□ -1.43
NUP49YGL172W YRA1Q12159 226 aaKnown RBP6.1□□□□□ -1.43
NUP49YGL172W SWM1Q12379 170 aa6.1□□□□□ -1.43
NUP49YGL172W APC2Q12440 853 aa6.1□□□□□ -1.43
NUP49YGL172W MTR10Q99189 972 aa6.1□□□□□ -1.43
NUP49YGL172W TFS1P14306 219 aa6.09□□□□□ -1.43
NUP49YGL172W SAM35P14693 329 aa6.09□□□□□ -1.43
NUP49YGL172W CTA1P15202 515 aa6.09□□□□□ -1.43
NUP49YGL172W PUP2P32379 260 aa6.09□□□□□ -1.43
NUP49YGL172W SLC1P33333 303 aa6.09□□□□□ -1.43
NUP49YGL172W YKR073CP36153 106 aa6.09□□□□□ -1.43
NUP49YGL172W RTC2P38279 296 aa6.09□□□□□ -1.43
NUP49YGL172W RPS20P38701 121 aaKnown RBP6.09□□□□□ -1.43
NUP49YGL172W APE4P38821 490 aa6.09□□□□□ -1.43
NUP49YGL172W YEL057CP39983 233 aa6.09□□□□□ -1.43
NUP49YGL172W QRI7P43122 407 aa6.09□□□□□ -1.43
NUP49YGL172W IRC7P43623 340 aa6.09□□□□□ -1.43
NUP49YGL172W SDC1Q03323 175 aa6.09□□□□□ -1.43
NUP49YGL172W DML1Q03652 475 aa6.09□□□□□ -1.43
NUP49YGL172W YPR127WQ06494 345 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms