RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C SHE1P38200 338 aa2.52□□□□□ -2.01
VAB2YEL005C RCK2P38623 610 aa2.52□□□□□ -2.01
VAB2YEL005C MMS21P38632 267 aa2.52□□□□□ -2.01
VAB2YEL005C EFM1P38732 585 aa2.52□□□□□ -2.01
VAB2YEL005C SSO2P39926 295 aa2.52□□□□□ -2.01
VAB2YEL005C SEH1P53011 349 aaKnown RBP2.52□□□□□ -2.01
VAB2YEL005C PXR1P53335 271 aaPredicted RBP2.52□□□□□ -2.01
VAB2YEL005C SUR7P54003 302 aa2.52□□□□□ -2.01
VAB2YEL005C RMI1Q02685 241 aa2.52□□□□□ -2.01
VAB2YEL005C REX3Q12090 404 aa2.52□□□□□ -2.01
VAB2YEL005C YPR1Q12458 312 aa2.52□□□□□ -2.01
VAB2YEL005C ADH1P00330 348 aaKnown RBP2.51□□□□□ -2.01
VAB2YEL005C PUT4P15380 627 aa2.51□□□□□ -2.01
VAB2YEL005C PET18P25362 215 aa2.51□□□□□ -2.01
VAB2YEL005C GGC1P38988 300 aa2.51□□□□□ -2.01
VAB2YEL005C UTP25P40498 721 aaKnown RBP2.51□□□□□ -2.01
VAB2YEL005C YCH1P42937 148 aa2.51□□□□□ -2.01
VAB2YEL005C YFR018CP43599 363 aa2.51□□□□□ -2.01
VAB2YEL005C YOR376WQ08900 122 aa2.51□□□□□ -2.01
VAB2YEL005C SLM3Q12093 417 aa2.51□□□□□ -2.01
VAB2YEL005C RPL18AP0CX49 186 aaKnown RBP2.5□□□□□ -2.01
VAB2YEL005C RPL18BP0CX50 186 aaKnown RBP2.5□□□□□ -2.01
VAB2YEL005C GCD2P12754 651 aaPredicted RBP2.5□□□□□ -2.01
VAB2YEL005C OSW5P40219 148 aa2.5□□□□□ -2.01
VAB2YEL005C CAB5Q03941 241 aa2.5□□□□□ -2.01
VAB2YEL005C DTD1Q07648 150 aaKnown RBP2.5□□□□□ -2.01
VAB2YEL005C RPN8Q08723 338 aaKnown RBP2.5□□□□□ -2.01
VAB2YEL005C MDY2Q12285 212 aa2.5□□□□□ -2.01
VAB2YEL005C VPS63O13549 108 aa2.49□□□□□ -2.01
VAB2YEL005C ERD1P16151 362 aa2.49□□□□□ -2.01
VAB2YEL005C YPS1P32329 569 aa2.49□□□□□ -2.01
VAB2YEL005C SUR1P33300 382 aa2.49□□□□□ -2.01
VAB2YEL005C SWC5P38326 303 aa2.49□□□□□ -2.01
VAB2YEL005C CHL4P38907 458 aa2.49□□□□□ -2.01
VAB2YEL005C YDR089WP38966 869 aa2.49□□□□□ -2.01
VAB2YEL005C RRT13P40042 185 aa2.49□□□□□ -2.01
VAB2YEL005C AIM20P40451 204 aa2.49□□□□□ -2.01
VAB2YEL005C PGU1P47180 361 aa2.49□□□□□ -2.01
VAB2YEL005C YGR018CP53211 109 aa2.49□□□□□ -2.01
VAB2YEL005C VOA1P53262 265 aa2.49□□□□□ -2.01
VAB2YEL005C IRC4Q03036 179 aa2.49□□□□□ -2.01
VAB2YEL005C API2Q04413 109 aa2.49□□□□□ -2.01
VAB2YEL005C SAM4Q08985 325 aaKnown RBP2.49□□□□□ -2.01
VAB2YEL005C RPN6Q12377 434 aa2.49□□□□□ -2.01
VAB2YEL005C YBL111CQ3E7Y5 667 aa2.49□□□□□ -2.01
VAB2YEL005C CBP2P03874 630 aaPredicted RBP2.48□□□□□ -2.01
VAB2YEL005C ZRT1P32804 376 aa2.48□□□□□ -2.01
VAB2YEL005C SMP1P38128 452 aa2.48□□□□□ -2.01
VAB2YEL005C YMR262WP38430 313 aa2.48□□□□□ -2.01
VAB2YEL005C CTM1P38818 585 aa2.48□□□□□ -2.01
VAB2YEL005C PES4P39684 611 aa2.48□□□□□ -2.01
VAB2YEL005C COQ5P49017 307 aa2.48□□□□□ -2.01
VAB2YEL005C UTP15Q04305 513 aaKnown RBP2.48□□□□□ -2.01
VAB2YEL005C MRX9Q07349 420 aaKnown RBP2.48□□□□□ -2.01
VAB2YEL005C YOL029CQ08187 201 aa2.48□□□□□ -2.01
VAB2YEL005C TAF10Q12030 206 aa2.48□□□□□ -2.01
VAB2YEL005C FLO11P08640 1367 aa2.48□□□□□ -2.01
VAB2YEL005C TPI1P00942 248 aaKnown RBP2.47□□□□□ -2.01
VAB2YEL005C RAD7P06779 565 aa2.47□□□□□ -2.01
VAB2YEL005C SAR1P20606 190 aaKnown RBP2.47□□□□□ -2.01
VAB2YEL005C RAD23P32628 398 aaKnown RBP2.47□□□□□ -2.01
VAB2YEL005C BUD2P33314 1104 aa2.47□□□□□ -2.01
VAB2YEL005C TAE1P38340 232 aa2.47□□□□□ -2.01
VAB2YEL005C SED5Q01590 340 aa2.47□□□□□ -2.01
VAB2YEL005C YPL080CQ02826 108 aa2.47□□□□□ -2.01
VAB2YEL005C VPS20Q04272 221 aa2.47□□□□□ -2.01
VAB2YEL005C MRX8Q05473 314 aa2.47□□□□□ -2.01
VAB2YEL005C REP1P03871 373 aa2.46□□□□□ -2.02
VAB2YEL005C INO2P26798 304 aa2.46□□□□□ -2.02
VAB2YEL005C CBF5P33322 483 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
VAB2YEL005C SMF2P38778 549 aa2.46□□□□□ -2.02
VAB2YEL005C YIL054WP40524 105 aa2.46□□□□□ -2.02
VAB2YEL005C YGR266WP53326 701 aa2.46□□□□□ -2.02
VAB2YEL005C ARP5P53946 755 aa2.46□□□□□ -2.02
VAB2YEL005C ABZ2Q03266 374 aa2.46□□□□□ -2.02
VAB2YEL005C RDL2Q08742 149 aaKnown RBP2.46□□□□□ -2.02
VAB2YEL005C TIR4Q12218 487 aaPredicted RBP2.46□□□□□ -2.02
VAB2YEL005C TFC7Q12415 435 aa2.46□□□□□ -2.02
VAB2YEL005C RAX2Q12465 1220 aa2.46□□□□□ -2.02
VAB2YEL005C PRM4Q12498 284 aa2.46□□□□□ -2.02
VAB2YEL005C YAL067W-AQ8TGK6 75 aa2.46□□□□□ -2.02
VAB2YEL005C CAR2P07991 424 aaKnown RBP2.45□□□□□ -2.02
VAB2YEL005C SPS100P13130 326 aa2.45□□□□□ -2.02
VAB2YEL005C CKA2P19454 339 aa2.45□□□□□ -2.02
VAB2YEL005C YHR035WP38769 630 aa2.45□□□□□ -2.02
VAB2YEL005C MNN9P39107 395 aaKnown RBP2.45□□□□□ -2.02
VAB2YEL005C INA22P40576 216 aa2.45□□□□□ -2.02
VAB2YEL005C LOH1P47055 219 aa2.45□□□□□ -2.02
VAB2YEL005C INP1Q03694 420 aa2.45□□□□□ -2.02
VAB2YEL005C FAR10Q06001 478 aa2.45□□□□□ -2.02
VAB2YEL005C STE23Q06010 1027 aa2.45□□□□□ -2.02
VAB2YEL005C YPL245WQ12179 454 aaKnown RBP2.45□□□□□ -2.02
VAB2YEL005C UTP23Q12339 254 aaKnown RBP2.45□□□□□ -2.02
VAB2YEL005C PFK27Q12471 397 aaPredicted RBP2.45□□□□□ -2.02
VAB2YEL005C IZH4Q99393 312 aa2.45□□□□□ -2.02
VAB2YEL005C MRPL20P22354 195 aaPredicted RBP2.44□□□□□ -2.02
VAB2YEL005C RPL16BP26785 198 aaKnown RBP2.44□□□□□ -2.02
VAB2YEL005C TIP20P33891 701 aa2.44□□□□□ -2.02
VAB2YEL005C DTR1P38125 572 aa2.44□□□□□ -2.02
VAB2YEL005C RFT1P38206 574 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms