RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W TY1A-BLQ12266 440 aa7.23□□□□□ -1.25
YRF1-1YDR545W COA6Q3E846 104 aa7.23□□□□□ -1.25
YRF1-1YDR545W MIH1P23748 554 aa7.22□□□□□ -1.25
YRF1-1YDR545W SPS19P32573 292 aaKnown RBP7.22□□□□□ -1.25
YRF1-1YDR545W IME4P41833 600 aa7.22□□□□□ -1.25
YRF1-1YDR545W YJR112W-AQ3E743 109 aa7.22□□□□□ -1.25
YRF1-1YDR545W SPT3P06844 337 aa7.22□□□□□ -1.25
YRF1-1YDR545W HTS1P07263 546 aaKnown RBP7.22□□□□□ -1.25
YRF1-1YDR545W YIM1P28625 365 aa7.22□□□□□ -1.25
YRF1-1YDR545W SUA5P32579 426 aa7.22□□□□□ -1.25
YRF1-1YDR545W COX16P47081 118 aa7.22□□□□□ -1.25
YRF1-1YDR545W TY1A-DR2Q03964 440 aaKnown RBP7.22□□□□□ -1.25
YRF1-1YDR545W SST2P11972 698 aaKnown RBP7.22□□□□□ -1.25
YRF1-1YDR545W TKL2P33315 681 aa7.22□□□□□ -1.25
YRF1-1YDR545W LDB7P38210 180 aa7.22□□□□□ -1.25
YRF1-1YDR545W YIR007WP40566 764 aa7.22□□□□□ -1.25
YRF1-1YDR545W RPL17BP46990 184 aaKnown RBP7.22□□□□□ -1.25
YRF1-1YDR545W YPL108WQ02872 168 aaPredicted RBP7.22□□□□□ -1.25
YRF1-1YDR545W MHT1Q12525 324 aa7.22□□□□□ -1.25
YRF1-1YDR545W CDC21P06785 304 aa7.22□□□□□ -1.25
YRF1-1YDR545W SEC12P11655 471 aa7.22□□□□□ -1.25
YRF1-1YDR545W NAB2P32505 525 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
YRF1-1YDR545W NIT3P49954 291 aa7.22□□□□□ -1.25
YRF1-1YDR545W NSA1P53136 463 aaPredicted RBP7.22□□□□□ -1.25
YRF1-1YDR545W ODC1Q03028 310 aa7.22□□□□□ -1.25
YRF1-1YDR545W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
YRF1-1YDR545W GAL80P04387 435 aa7.21□□□□□ -1.25
YRF1-1YDR545W MRPL37P36532 105 aa7.21□□□□□ -1.25
YRF1-1YDR545W RPL10P41805 221 aaKnown RBP7.21□□□□□ -1.25
YRF1-1YDR545W BIT61P47041 543 aa7.21□□□□□ -1.25
YRF1-1YDR545W PKP2P53170 491 aa7.21□□□□□ -1.25
YRF1-1YDR545W MHR1Q06630 226 aa7.21□□□□□ -1.25
YRF1-1YDR545W PRE6P40303 254 aaKnown RBP7.21□□□□□ -1.26
YRF1-1YDR545W PRM10P42946 383 aa7.21□□□□□ -1.26
YRF1-1YDR545W SRP1Q02821 542 aaKnown RBP7.21□□□□□ -1.26
YRF1-1YDR545W PLB2Q03674 706 aa7.21□□□□□ -1.26
YRF1-1YDR545W PRB1P09232 635 aa7.21□□□□□ -1.26
YRF1-1YDR545W SNF5P18480 905 aa7.21□□□□□ -1.26
YRF1-1YDR545W NUP57P48837 541 aa7.21□□□□□ -1.26
YRF1-1YDR545W SSK1Q07084 712 aa7.21□□□□□ -1.26
YRF1-1YDR545W SPS4P09937 338 aa7.21□□□□□ -1.26
YRF1-1YDR545W GPT2P36148 743 aa7.21□□□□□ -1.26
YRF1-1YDR545W YNR065CP53751 1116 aa7.21□□□□□ -1.26
YRF1-1YDR545W CRT10Q08226 957 aa7.21□□□□□ -1.26
YRF1-1YDR545W YDL176WQ12027 708 aa7.21□□□□□ -1.26
YRF1-1YDR545W ADH3P07246 375 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W AFT1P22149 690 aa7.2□□□□□ -1.26
YRF1-1YDR545W PAN3P36102 679 aaPredicted RBP7.2□□□□□ -1.26
YRF1-1YDR545W DOC1P53068 250 aa7.2□□□□□ -1.26
YRF1-1YDR545W FMP41P53889 259 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W MSC1Q03104 513 aa7.2□□□□□ -1.26
YRF1-1YDR545W PUN1Q06991 263 aa7.2□□□□□ -1.26
YRF1-1YDR545W MRX9Q07349 420 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W RPS31P05759 152 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W CTT1P06115 562 aa7.2□□□□□ -1.26
YRF1-1YDR545W UBI4P0CG63 381 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W RPL40AP0CH08 128 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W RPL40BP0CH09 128 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W RAD17P48581 401 aa7.2□□□□□ -1.26
YRF1-1YDR545W AIM32Q04689 311 aa7.2□□□□□ -1.26
YRF1-1YDR545W BER1Q06688 274 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W YLR146W-AQ2V2P1 62 aa7.2□□□□□ -1.26
YRF1-1YDR545W MSN2P33748 704 aa7.2□□□□□ -1.26
YRF1-1YDR545W PAU24P38155 120 aa7.2□□□□□ -1.26
YRF1-1YDR545W SAE3P89114 91 aa7.2□□□□□ -1.26
YRF1-1YDR545W SNO1Q03144 224 aa7.2□□□□□ -1.26
YRF1-1YDR545W RUB1Q03919 77 aa7.2□□□□□ -1.26
YRF1-1YDR545W TYW1Q08960 810 aaKnown RBP7.2□□□□□ -1.26
YRF1-1YDR545W TY1A-DR3Q12441 440 aa7.2□□□□□ -1.26
YRF1-1YDR545W PDX1P16451 410 aa7.2□□□□□ -1.26
YRF1-1YDR545W SRO77P38163 1010 aa7.2□□□□□ -1.26
YRF1-1YDR545W HRB1P38922 454 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
YRF1-1YDR545W CAC2Q04199 468 aa7.2□□□□□ -1.26
YRF1-1YDR545W YML003WP0CF16 290 aa7.19□□□□□ -1.26
YRF1-1YDR545W MRP1P10662 321 aaKnown RBP7.19□□□□□ -1.26
YRF1-1YDR545W DTR1P38125 572 aa7.19□□□□□ -1.26
YRF1-1YDR545W NEM1P38757 446 aa7.19□□□□□ -1.26
YRF1-1YDR545W SLX9P53251 210 aaPredicted RBP7.19□□□□□ -1.26
YRF1-1YDR545W RSM23Q01163 450 aa7.19□□□□□ -1.26
YRF1-1YDR545W DCI1Q08558 271 aa7.19□□□□□ -1.26
YRF1-1YDR545W PRE7P23724 241 aaKnown RBP7.19□□□□□ -1.26
YRF1-1YDR545W PUS9Q12069 462 aa7.19□□□□□ -1.26
YRF1-1YDR545W CDC9P04819 755 aa7.19□□□□□ -1.26
YRF1-1YDR545W SOL2P37262 315 aa7.19□□□□□ -1.26
YRF1-1YDR545W LYS12P40495 371 aaKnown RBP7.19□□□□□ -1.26
YRF1-1YDR545W MAD2P40958 196 aa7.19□□□□□ -1.26
YRF1-1YDR545W PAU12P53343 120 aa7.19□□□□□ -1.26
YRF1-1YDR545W RBS1Q05672 457 aaKnown RBP7.19□□□□□ -1.26
YRF1-1YDR545W RRP42Q12277 265 aaPredicted RBP7.19□□□□□ -1.26
YRF1-1YDR545W YDR461C-AQ2V2P7 80 aa7.19□□□□□ -1.26
YRF1-1YDR545W RPB3P16370 318 aaKnown RBP7.19□□□□□ -1.26
YRF1-1YDR545W DRE2P36152 348 aa7.19□□□□□ -1.26
YRF1-1YDR545W AIM29P36154 155 aa7.19□□□□□ -1.26
YRF1-1YDR545W MGR1P25573 417 aa7.19□□□□□ -1.26
YRF1-1YDR545W TIP1P27654 210 aaPredicted RBP7.19□□□□□ -1.26
YRF1-1YDR545W TIP20P33891 701 aa7.19□□□□□ -1.26
YRF1-1YDR545W KAE1P36132 386 aa7.19□□□□□ -1.26
YRF1-1YDR545W CUE1P38428 203 aa7.19□□□□□ -1.26
YRF1-1YDR545W RTC3P38804 111 aaPredicted RBP7.19□□□□□ -1.26
YRF1-1YDR545W MSS11Q03825 758 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms