RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SIN4P32259 974 aa1.22□□□□□ -2.21
MSN5YDR335W ZUO1P32527 433 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W ATO2P32907 282 aa1.22□□□□□ -2.21
MSN5YDR335W ECM1P39715 212 aa1.22□□□□□ -2.21
MSN5YDR335W MTW1P39731 289 aa1.22□□□□□ -2.21
MSN5YDR335W GAT2P40209 560 aa1.22□□□□□ -2.21
MSN5YDR335W YIL060WP40519 144 aa1.22□□□□□ -2.21
MSN5YDR335W SYG1P40528 902 aa1.22□□□□□ -2.21
MSN5YDR335W ADO1P47143 340 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W UBC11P52492 156 aa1.22□□□□□ -2.21
MSN5YDR335W KTR6P54070 446 aa1.22□□□□□ -2.21
MSN5YDR335W RHO3Q00245 231 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W MMT1Q03218 510 aa1.22□□□□□ -2.21
MSN5YDR335W HSP31Q04432 237 aa1.22□□□□□ -2.21
MSN5YDR335W SPC2Q04969 178 aa1.22□□□□□ -2.21
MSN5YDR335W RRS1Q08746 203 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W YPR022CQ12139 1133 aa1.22□□□□□ -2.21
MSN5YDR335W MSH5Q12175 901 aa1.22□□□□□ -2.21
MSN5YDR335W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
MSN5YDR335W TIP41Q12199 356 aa1.22□□□□□ -2.21
MSN5YDR335W EMP46Q12396 444 aa1.22□□□□□ -2.21
MSN5YDR335W LAG2Q92325 660 aa1.22□□□□□ -2.21
MSN5YDR335W YOS9Q99220 542 aa1.22□□□□□ -2.21
MSN5YDR335W RPS14AP06367 137 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W RAD1P06777 1100 aa1.22□□□□□ -2.21
MSN5YDR335W BAR1P12630 587 aa1.22□□□□□ -2.21
MSN5YDR335W CUP2P15315 225 aa1.22□□□□□ -2.21
MSN5YDR335W SAM2P19358 384 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W NUP1P20676 1076 aa1.22□□□□□ -2.21
MSN5YDR335W RBK1P25332 333 aa1.22□□□□□ -2.21
MSN5YDR335W TRX3P25372 127 aa1.22□□□□□ -2.21
MSN5YDR335W MRPL10P36520 322 aa1.22□□□□□ -2.21
MSN5YDR335W RPS14BP39516 138 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W NPT1P39683 429 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W YAL037WP39728 267 aa1.22□□□□□ -2.21
MSN5YDR335W ERG28P40030 148 aa1.22□□□□□ -2.21
MSN5YDR335W NDC80P40460 691 aa1.22□□□□□ -2.21
MSN5YDR335W MRM2P53123 320 aa1.22□□□□□ -2.21
MSN5YDR335W PEX31P53203 462 aa1.22□□□□□ -2.21
MSN5YDR335W YNL095CP53932 642 aa1.22□□□□□ -2.21
MSN5YDR335W PEX10Q05568 337 aa1.22□□□□□ -2.21
MSN5YDR335W ARC18Q05933 178 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W BER1Q06688 274 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W SSK1Q07084 712 aa1.22□□□□□ -2.21
MSN5YDR335W TLG2Q08144 397 aa1.22□□□□□ -2.21
MSN5YDR335W SMC5Q08204 1093 aa1.22□□□□□ -2.21
MSN5YDR335W SKI7Q08491 747 aaPredicted RBP1.22□□□□□ -2.21
MSN5YDR335W ALG7P07286 448 aa1.22□□□□□ -2.21
MSN5YDR335W ARF1P11076 181 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W PCT1P13259 424 aa1.22□□□□□ -2.21
MSN5YDR335W NAM9P27929 486 aa1.22□□□□□ -2.21
MSN5YDR335W VPS51P36116 164 aa1.22□□□□□ -2.21
MSN5YDR335W YHK8P38776 514 aa1.22□□□□□ -2.21
MSN5YDR335W SPL2P38839 148 aa1.22□□□□□ -2.21
MSN5YDR335W RTT107P38850 1070 aa1.22□□□□□ -2.21
MSN5YDR335W ARG2P40360 574 aa1.22□□□□□ -2.21
MSN5YDR335W AGP3P43548 558 aa1.22□□□□□ -2.21
MSN5YDR335W CHA4P43634 648 aa1.22□□□□□ -2.21
MSN5YDR335W SCD6P45978 349 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
MSN5YDR335W FMP33P46998 180 aa1.22□□□□□ -2.21
MSN5YDR335W CWC23P52868 283 aaPredicted RBP1.22□□□□□ -2.21
MSN5YDR335W NOP19P53317 196 aaPredicted RBP1.22□□□□□ -2.21
MSN5YDR335W RRN9P53437 365 aa1.22□□□□□ -2.21
MSN5YDR335W EBS1Q03466 884 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W SNU56Q03782 492 aaKnown RBP1.22□□□□□ -2.21
MSN5YDR335W YDR222WQ04925 415 aa1.22□□□□□ -2.21
MSN5YDR335W YDL144CQ07589 356 aa1.22□□□□□ -2.21
MSN5YDR335W DDC1Q08949 612 aa1.22□□□□□ -2.21
MSN5YDR335W YPL150WQ12152 901 aa1.22□□□□□ -2.21
MSN5YDR335W COX5AP00424 153 aa1.21□□□□□ -2.22
MSN5YDR335W PGK1P00560 416 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W SUC2P00724 532 aa1.21□□□□□ -2.22
MSN5YDR335W RIP1P08067 215 aa1.21□□□□□ -2.22
MSN5YDR335W TYR1P20049 452 aa1.21□□□□□ -2.22
MSN5YDR335W SRP54P20424 541 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W ISY1P21374 235 aaPredicted RBP1.21□□□□□ -2.22
MSN5YDR335W SLY1P22213 666 aa1.21□□□□□ -2.22
MSN5YDR335W PRP21P32524 280 aaPredicted RBP1.21□□□□□ -2.22
MSN5YDR335W SPS18P32572 300 aa1.21□□□□□ -2.22
MSN5YDR335W RIM2P38127 377 aa1.21□□□□□ -2.22
MSN5YDR335W YBR053CP38235 358 aa1.21□□□□□ -2.22
MSN5YDR335W WSC4P38739 605 aa1.21□□□□□ -2.22
MSN5YDR335W YPT35P38815 214 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W YKE4P40544 346 aa1.21□□□□□ -2.22
MSN5YDR335W URM1P40554 99 aaPredicted RBP1.21□□□□□ -2.22
MSN5YDR335W YFL015CP43578 164 aa1.21□□□□□ -2.22
MSN5YDR335W WWM1P43582 211 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W YFH7P43591 353 aa1.21□□□□□ -2.22
MSN5YDR335W PKP2P53170 491 aa1.21□□□□□ -2.22
MSN5YDR335W ALG13P53178 202 aa1.21□□□□□ -2.22
MSN5YDR335W GPI1P53306 609 aa1.21□□□□□ -2.22
MSN5YDR335W FRE4P53746 719 aa1.21□□□□□ -2.22
MSN5YDR335W YNL092WP53934 400 aa1.21□□□□□ -2.22
MSN5YDR335W RNT1Q02555 471 aa1.21□□□□□ -2.22
MSN5YDR335W GRX8Q05926 109 aa1.21□□□□□ -2.22
MSN5YDR335W YLR031WQ07978 186 aa1.21□□□□□ -2.22
MSN5YDR335W MCH4Q08268 501 aa1.21□□□□□ -2.22
MSN5YDR335W MUM3Q08750 479 aa1.21□□□□□ -2.22
MSN5YDR335W PFA4Q12006 378 aa1.21□□□□□ -2.22
MSN5YDR335W LSP1Q12230 341 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 472.4 ms