RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W NUP116Q02630 1113 aa3.91□□□□□ -1.78
HSP42YDR171W RMI1Q02685 241 aa3.91□□□□□ -1.78
HSP42YDR171W ELP3Q02908 557 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W SCS7Q03529 384 aa3.91□□□□□ -1.78
HSP42YDR171W GAS3Q03655 524 aa3.91□□□□□ -1.78
HSP42YDR171W TAF12Q03761 539 aa3.91□□□□□ -1.78
HSP42YDR171W ENT5Q03769 411 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W YDR249CQ03787 373 aa3.91□□□□□ -1.78
HSP42YDR171W AIM36Q03798 255 aa3.91□□□□□ -1.78
HSP42YDR171W ECM11Q04110 302 aa3.91□□□□□ -1.78
HSP42YDR171W RQC1Q05468 723 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W ECM7Q06200 448 aa3.91□□□□□ -1.78
HSP42YDR171W SYC1Q08553 188 aaPredicted RBP3.91□□□□□ -1.78
HSP42YDR171W SRL1Q08673 210 aa3.91□□□□□ -1.78
HSP42YDR171W LEU9Q12166 604 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W MDM32Q12171 622 aa3.91□□□□□ -1.78
HSP42YDR171W RTN2Q12443 393 aa3.91□□□□□ -1.78
HSP42YDR171W GCN4P03069 281 aa3.9□□□□□ -1.79
HSP42YDR171W YGL041W-AP0C5N3 154 aa3.9□□□□□ -1.79
HSP42YDR171W GAL3P13045 520 aa3.9□□□□□ -1.79
HSP42YDR171W MDH1P17505 334 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
HSP42YDR171W ART10P18634 518 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W CNB1P25296 175 aa3.9□□□□□ -1.79
HSP42YDR171W PMT2P31382 759 aa3.9□□□□□ -1.79
HSP42YDR171W JEN1P36035 616 aa3.9□□□□□ -1.79
HSP42YDR171W YBR137WP38276 179 aa3.9□□□□□ -1.79
HSP42YDR171W BIG1P38813 335 aa3.9□□□□□ -1.79
HSP42YDR171W NOP16P40007 231 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W ISC1P40015 477 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W RRT5P43607 289 aa3.9□□□□□ -1.79
HSP42YDR171W ASG7P46993 209 aa3.9□□□□□ -1.79
HSP42YDR171W ECM27P47144 725 aa3.9□□□□□ -1.79
HSP42YDR171W YJR154WP47181 346 aa3.9□□□□□ -1.79
HSP42YDR171W SSN8P47821 323 aa3.9□□□□□ -1.79
HSP42YDR171W CGR1P53188 120 aa3.9□□□□□ -1.79
HSP42YDR171W PEX31P53203 462 aa3.9□□□□□ -1.79
HSP42YDR171W YGR067CP53243 804 aa3.9□□□□□ -1.79
HSP42YDR171W CAF40P53829 373 aa3.9□□□□□ -1.79
HSP42YDR171W HXT11P54862 567 aa3.9□□□□□ -1.79
HSP42YDR171W RRN5Q02983 363 aa3.9□□□□□ -1.79
HSP42YDR171W NHP10Q03435 203 aa3.9□□□□□ -1.79
HSP42YDR171W MAK3Q03503 176 aa3.9□□□□□ -1.79
HSP42YDR171W TRM82Q03774 444 aa3.9□□□□□ -1.79
HSP42YDR171W ARX1Q03862 593 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W YLR283WQ05867 314 aa3.9□□□□□ -1.79
HSP42YDR171W YLR345WQ06137 509 aa3.9□□□□□ -1.79
HSP42YDR171W DBP9Q06218 594 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W DIS3Q08162 1001 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W SLD7Q08457 257 aa3.9□□□□□ -1.79
HSP42YDR171W RDR1Q08904 546 aa3.9□□□□□ -1.79
HSP42YDR171W YPL199CQ08954 240 aa3.9□□□□□ -1.79
HSP42YDR171W RRG1Q12167 365 aaPredicted RBP3.9□□□□□ -1.79
HSP42YDR171W ATP14Q12349 124 aa3.9□□□□□ -1.79
HSP42YDR171W WTM1Q12363 437 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W YPL247CQ12523 523 aa3.9□□□□□ -1.79
HSP42YDR171W EFG1Q3E705 233 aaKnown RBP3.9□□□□□ -1.79
HSP42YDR171W ASP3-2P0CX77 362 aa3.89□□□□□ -1.79
HSP42YDR171W ASP3-3P0CX78 362 aa3.89□□□□□ -1.79
HSP42YDR171W ASP3-4P0CX79 362 aa3.89□□□□□ -1.79
HSP42YDR171W ASP3-1P0CZ17 362 aa3.89□□□□□ -1.79
HSP42YDR171W RPL3P14126 387 aaKnown RBP3.89□□□□□ -1.79
HSP42YDR171W IDP1P21954 428 aaKnown RBP3.89□□□□□ -1.79
HSP42YDR171W GRR1P24814 1151 aa3.89□□□□□ -1.79
HSP42YDR171W RHB1P25378 209 aa3.89□□□□□ -1.79
HSP42YDR171W YIH1P25637 258 aa3.89□□□□□ -1.79
HSP42YDR171W GAC1P28006 793 aa3.89□□□□□ -1.79
HSP42YDR171W PTM1P32857 523 aa3.89□□□□□ -1.79
HSP42YDR171W RCK1P38622 512 aa3.89□□□□□ -1.79
HSP42YDR171W PTI1P39927 425 aaPredicted RBP3.89□□□□□ -1.79
HSP42YDR171W HAT2P39984 401 aa3.89□□□□□ -1.79
HSP42YDR171W AYR1P40471 297 aa3.89□□□□□ -1.79
HSP42YDR171W RTS2P40962 232 aa3.89□□□□□ -1.79
HSP42YDR171W VMA13P41807 478 aaKnown RBP3.89□□□□□ -1.79
HSP42YDR171W YFR018CP43599 363 aa3.89□□□□□ -1.79
HSP42YDR171W TOM22P49334 152 aa3.89□□□□□ -1.79
HSP42YDR171W YGL039WP53183 348 aaKnown RBP3.89□□□□□ -1.79
HSP42YDR171W EFM5P53200 248 aaKnown RBP3.89□□□□□ -1.79
HSP42YDR171W POP6P53218 158 aa3.89□□□□□ -1.79
HSP42YDR171W YGR127WP53275 312 aa3.89□□□□□ -1.79
HSP42YDR171W IBD2P53892 351 aa3.89□□□□□ -1.79
HSP42YDR171W RSM23Q01163 450 aa3.89□□□□□ -1.79
HSP42YDR171W NUP100Q02629 959 aa3.89□□□□□ -1.79
HSP42YDR171W GRX5Q02784 150 aa3.89□□□□□ -1.79
HSP42YDR171W RLI1Q03195 608 aaKnown RBP3.89□□□□□ -1.79
HSP42YDR171W VHS1Q03785 461 aa3.89□□□□□ -1.79
HSP42YDR171W YDR415CQ04033 374 aaPredicted RBP3.89□□□□□ -1.79
HSP42YDR171W NNT1Q05874 261 aa3.89□□□□□ -1.79
HSP42YDR171W VPS74Q06385 345 aa3.89□□□□□ -1.79
HSP42YDR171W PHO92Q06390 306 aa3.89□□□□□ -1.79
HSP42YDR171W MFG1Q07684 458 aa3.89□□□□□ -1.79
HSP42YDR171W THP1Q08231 455 aa3.89□□□□□ -1.79
HSP42YDR171W PEX27Q08580 376 aa3.89□□□□□ -1.79
HSP42YDR171W RTC5Q12108 567 aaKnown RBP3.89□□□□□ -1.79
HSP42YDR171W JLP1Q12358 412 aa3.89□□□□□ -1.79
HSP42YDR171W SUS1Q6WNK7 96 aa3.89□□□□□ -1.79
HSP42YDR171W ADE4P04046 510 aaKnown RBP3.88□□□□□ -1.79
HSP42YDR171W ARG81P05085 880 aa3.88□□□□□ -1.79
HSP42YDR171W IMG1P25626 169 aa3.88□□□□□ -1.79
HSP42YDR171W TAH1P25638 111 aaPredicted RBP3.88□□□□□ -1.79
HSP42YDR171W ARO7P32178 256 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms