RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	SNC2	P33328	115 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	STS1	P38637	319 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	MUP3	P38734	546 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	CKB2	P38930	258 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	PHO90	P39535	881 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	GIP2	P40036	548 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	YER188W	P40103	239 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	POG1	P40473	351 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	ATG18	P43601	500 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	YJR149W	P47177	404 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	YDR366C	P87287	132 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	YVH1	Q02256	364 aa	Known RBP	4.9	□□□□□ -1.63
DBF4	YDR052C	SLD5	Q03406	294 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	GAS3	Q03655	524 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	GSF2	Q04697	403 aa	Known RBP	4.9	□□□□□ -1.63
DBF4	YDR052C	YPR109W	Q06104	294 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	SWC7	Q06707	132 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	ERP3	Q12403	225 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	PRM4	Q12498	284 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	CTF3	Q12748	733 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	PET20	Q99373	253 aa		4.9	□□□□□ -1.63
DBF4	YDR052C	CAN1	P04817	590 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	HAP2	P06774	265 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	SWI5	P08153	709 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	TY1A-H	P0C2I4	478 aa	Known RBP	4.89	□□□□□ -1.63
DBF4	YDR052C	CPR1	P14832	162 aa	Known RBP	4.89	□□□□□ -1.63
DBF4	YDR052C	ERD1	P16151	362 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
DBF4	YDR052C	ART10	P18634	518 aa	Known RBP	4.89	□□□□□ -1.63
DBF4	YDR052C	EHD3	P28817	500 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	MRP20	P32387	263 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	YBR096W	P38256	230 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	PNT1	P38969	423 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	BDH1	P39714	382 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	KHA1	P40309	873 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	ARG2	P40360	574 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	VNX1	P42839	908 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	ASN1	P49089	572 aa	Known RBP	4.89	□□□□□ -1.63
DBF4	YDR052C	ATF2	P53296	535 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	GIP3	Q03016	1276 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	PLB2	Q03674	706 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	GMC1	Q04399	608 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	TPO3	Q06451	622 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	ANT1	Q06497	328 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	THI13	Q07748	340 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	INP54	Q08227	384 aa	Known RBP	4.89	□□□□□ -1.63
DBF4	YDR052C	POM33	Q12164	279 aa		4.89	□□□□□ -1.63
DBF4	YDR052C	GAL4	P04386	881 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	PEP4	P07267	405 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	STE50	P25344	346 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YCP4	P25349	247 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	SUA7	P29055	345 aa	Predicted RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	SYN8	P31377	255 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	COS9	P36034	407 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YKL151C	P36059	337 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	URA8	P38627	578 aa	Predicted RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	CHS7	P38843	316 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	AIM46	P38885	310 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	ELO3	P40319	345 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YGL114W	P53134	725 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YGR151C	P53287	111 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YNL184C	P53876	108 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	DIA1	P54005	336 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	CYT2	Q00873	224 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YDR056C	Q12025	205 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	RDL1	Q12305	139 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	TMA17	Q12513	150 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YNR034W-A	Q3E841	98 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	COX2	P00410	251 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	NHP6B	P11633	99 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
DBF4	YDR052C	PHO91	P27514	894 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	SSH4	P32343	579 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	ASH1	P34233	588 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	ASK1	P35734	292 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	IRS4	P36115	615 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	VBA5	P36172	582 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YBR197C	P38306	217 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YPT31	P38555	223 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	YFL052W	P43551	465 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	CHA4	P43634	648 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	CSN12	P47130	423 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	IBA57	P47158	497 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	FAA4	P47912	694 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	FLC3	P53121	802 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	BUD17	P53727	317 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	ALG11	P53954	548 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	PRP38	Q00723	242 aa	Predicted RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	YMR160W	Q03823	816 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	ATC1	Q04005	294 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YMR130W	Q04223	302 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YML096W	Q04489	525 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	AIM33	Q04516	312 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	DUS4	Q06063	367 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YLR326W	Q06170	240 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	TEN1	Q07921	160 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YOL131W	Q08270	108 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	YOR059C	Q08448	450 aa	Known RBP	4.88	□□□□□ -1.63
DBF4	YDR052C	ATG5	Q12380	294 aa		4.88	□□□□□ -1.63
DBF4	YDR052C	BI3	Q9ZZW7	517 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms