RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YPR1Q12458 312 aa11.3□□□□□ -0.6
PTP1YDL230W AI1P03875 834 aa11.29□□□□□ -0.6
PTP1YDL230W EXG1P23776 448 aaKnown RBP11.29□□□□□ -0.6
PTP1YDL230W GPI12P23797 304 aa11.29□□□□□ -0.6
PTP1YDL230W PUP1P25043 261 aa11.29□□□□□ -0.6
PTP1YDL230W ATG22P25568 528 aa11.29□□□□□ -0.6
PTP1YDL230W AHC2P25649 128 aa11.29□□□□□ -0.6
PTP1YDL230W TIM12P32830 109 aa11.29□□□□□ -0.6
PTP1YDL230W SDS22P36047 338 aa11.29□□□□□ -0.6
PTP1YDL230W EXO84P38261 753 aa11.29□□□□□ -0.6
PTP1YDL230W LTP1P40347 161 aa11.29□□□□□ -0.6
PTP1YDL230W YIL166CP40445 542 aa11.29□□□□□ -0.6
PTP1YDL230W SDP1P40479 209 aa11.29□□□□□ -0.6
PTP1YDL230W ALB1P47019 175 aaPredicted RBP11.29□□□□□ -0.6
PTP1YDL230W YGL235WP53071 178 aa11.29□□□□□ -0.6
PTP1YDL230W PAU12P53343 120 aa11.29□□□□□ -0.6
PTP1YDL230W TDA1Q03533 586 aa11.29□□□□□ -0.6
PTP1YDL230W SNT309Q06091 175 aaPredicted RBP11.29□□□□□ -0.6
PTP1YDL230W PHO92Q06390 306 aa11.29□□□□□ -0.6
PTP1YDL230W TAZ1Q06510 381 aa11.29□□□□□ -0.6
PTP1YDL230W YPR174CQ06616 221 aaPredicted RBP11.29□□□□□ -0.6
PTP1YDL230W CYK3Q07533 885 aa11.29□□□□□ -0.6
PTP1YDL230W GUP2Q08929 609 aa11.29□□□□□ -0.6
PTP1YDL230W HAP4P14064 554 aa11.28□□□□□ -0.6
PTP1YDL230W PRE2P30656 287 aaKnown RBP11.28□□□□□ -0.6
PTP1YDL230W PPQ1P32945 549 aa11.28□□□□□ -0.6
PTP1YDL230W TMA19P35691 167 aaKnown RBP11.28□□□□□ -0.6
PTP1YDL230W RPS27AP35997 82 aaKnown RBP11.28□□□□□ -0.6
PTP1YDL230W PAU24P38155 120 aa11.28□□□□□ -0.6
PTP1YDL230W RPS27BP38711 82 aa11.28□□□□□ -0.6
PTP1YDL230W POP1P41812 875 aa11.28□□□□□ -0.6
PTP1YDL230W TIM54P47045 478 aa11.28□□□□□ -0.6
PTP1YDL230W TPN1P53099 579 aa11.28□□□□□ -0.6
PTP1YDL230W YNR014WP53719 212 aa11.28□□□□□ -0.6
PTP1YDL230W ERG13P54839 491 aaKnown RBP11.28□□□□□ -0.6
PTP1YDL230W RRP15Q06511 250 aaPredicted RBP11.28□□□□□ -0.6
PTP1YDL230W ENV7Q12003 364 aa11.28□□□□□ -0.6
PTP1YDL230W SFG1Q12507 346 aa11.28□□□□□ -0.6
PTP1YDL230W CYC1P00044 109 aaPredicted RBP11.27□□□□□ -0.61
PTP1YDL230W FLP1P03870 423 aa11.27□□□□□ -0.61
PTP1YDL230W SEC12P11655 471 aa11.27□□□□□ -0.61
PTP1YDL230W YPK2P18961 677 aa11.27□□□□□ -0.61
PTP1YDL230W SAR1P20606 190 aaKnown RBP11.27□□□□□ -0.61
PTP1YDL230W HCM1P25364 564 aa11.27□□□□□ -0.61
PTP1YDL230W ERG9P29704 444 aa11.27□□□□□ -0.61
PTP1YDL230W SNC1P31109 117 aa11.27□□□□□ -0.61
PTP1YDL230W HYM1P32464 399 aa11.27□□□□□ -0.61
PTP1YDL230W SHE2P36068 246 aaKnown RBP RIP-Chip data11.27□□□□□ -0.61not detected
PTP1YDL230W RPP1P38786 293 aa11.27□□□□□ -0.61
PTP1YDL230W PTH1P38876 190 aaKnown RBP11.27□□□□□ -0.61
PTP1YDL230W SKN7P38889 622 aa11.27□□□□□ -0.61
PTP1YDL230W CFD1P40558 293 aa11.27□□□□□ -0.61
PTP1YDL230W IDS2P46958 469 aa11.27□□□□□ -0.61
PTP1YDL230W VOA1P53262 265 aa11.27□□□□□ -0.61
PTP1YDL230W LSM7P53905 115 aaKnown RBP11.27□□□□□ -0.61
PTP1YDL230W RRN11Q04712 507 aa11.27□□□□□ -0.61
PTP1YDL230W RBS1Q05672 457 aaKnown RBP11.27□□□□□ -0.61
PTP1YDL230W TPO3Q06451 622 aa11.27□□□□□ -0.61
PTP1YDL230W NBA1Q08229 501 aaKnown RBP11.27□□□□□ -0.61
PTP1YDL230W YOR283WQ12040 230 aaKnown RBP11.27□□□□□ -0.61
PTP1YDL230W RPL6BP05739 176 aaKnown RBP11.26□□□□□ -0.61
PTP1YDL230W YGL041W-AP0C5N3 154 aa11.26□□□□□ -0.61
PTP1YDL230W ECT1P33412 323 aa11.26□□□□□ -0.61
PTP1YDL230W HIS7P33734 552 aaKnown RBP11.26□□□□□ -0.61
PTP1YDL230W ANR2P36090 516 aaPredicted RBP11.26□□□□□ -0.61
PTP1YDL230W OCA5P38738 679 aa11.26□□□□□ -0.61
PTP1YDL230W RRP4P38792 359 aaKnown RBP11.26□□□□□ -0.61
PTP1YDL230W PAC1P39946 494 aaKnown RBP11.26□□□□□ -0.61
PTP1YDL230W YNL208WP40159 199 aaKnown RBP11.26□□□□□ -0.61
PTP1YDL230W YIL152WP40455 235 aa11.26□□□□□ -0.61
PTP1YDL230W SAM37P50110 327 aa11.26□□□□□ -0.61
PTP1YDL230W NGL2Q03264 515 aaKnown RBP11.26□□□□□ -0.61
PTP1YDL230W SSK1Q07084 712 aa11.26□□□□□ -0.61
PTP1YDL230W ATG41Q12048 136 aa11.26□□□□□ -0.61
PTP1YDL230W PSF1Q12488 208 aa11.26□□□□□ -0.61
PTP1YDL230W CYR1P08678 2026 aaKnown RBP11.26□□□□□ -0.61
PTP1YDL230W AI4P03878 556 aa11.25□□□□□ -0.61
PTP1YDL230W CDC9P04819 755 aa11.25□□□□□ -0.61
PTP1YDL230W HIS3P06633 220 aa11.25□□□□□ -0.61
PTP1YDL230W RPL20AP0CX23 172 aaKnown RBP11.25□□□□□ -0.61
PTP1YDL230W RPL20BP0CX24 172 aaPredicted RBP11.25□□□□□ -0.61
PTP1YDL230W PET122P10355 254 aa11.25□□□□□ -0.61
PTP1YDL230W SNF5P18480 905 aa11.25□□□□□ -0.61
PTP1YDL230W BOS1P25385 244 aa11.25□□□□□ -0.61
PTP1YDL230W IMG1P25626 169 aa11.25□□□□□ -0.61
PTP1YDL230W CWP1P28319 239 aa11.25□□□□□ -0.61
PTP1YDL230W JEN1P36035 616 aa11.25□□□□□ -0.61
PTP1YDL230W MAL32P38158 584 aa11.25□□□□□ -0.61
PTP1YDL230W ICE2P40499 491 aa11.25□□□□□ -0.61
PTP1YDL230W SYG1P40528 902 aa11.25□□□□□ -0.61
PTP1YDL230W MAL12P53341 584 aa11.25□□□□□ -0.61
PTP1YDL230W YPR127WQ06494 345 aa11.25□□□□□ -0.61
PTP1YDL230W YLR030WQ07967 263 aa11.25□□□□□ -0.61
PTP1YDL230W FRE6Q12473 712 aa11.25□□□□□ -0.61
PTP1YDL230W RPL1AP0CX43 217 aaKnown RBP11.24□□□□□ -0.61
PTP1YDL230W RPL1BP0CX44 217 aaKnown RBP11.24□□□□□ -0.61
PTP1YDL230W PET54P10834 293 aa11.24□□□□□ -0.61
PTP1YDL230W YCR102CP25608 368 aa11.24□□□□□ -0.61
PTP1YDL230W YBR242WP38331 238 aa11.24□□□□□ -0.61
PTP1YDL230W VPS52P39904 641 aa11.24□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms