RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W YLR224WQ05947 369 aa7.28□□□□□ -1.24
NDE2YDL085W MRPL35Q06678 367 aa7.28□□□□□ -1.24
NDE2YDL085W SKI7Q08491 747 aaPredicted RBP7.28□□□□□ -1.24
NDE2YDL085W IRC13Q08630 104 aa7.28□□□□□ -1.24
NDE2YDL085W FEX1Q08913 375 aa7.28□□□□□ -1.24
NDE2YDL085W QCR7P00128 127 aa7.27□□□□□ -1.25
NDE2YDL085W YOL162WP0CF19 215 aa7.27□□□□□ -1.25
NDE2YDL085W STE12P13574 688 aa7.27□□□□□ -1.25
NDE2YDL085W AAC3P18238 307 aa7.27□□□□□ -1.25
NDE2YDL085W PPH21P23594 369 aa7.27□□□□□ -1.25
NDE2YDL085W PUP1P25043 261 aa7.27□□□□□ -1.25
NDE2YDL085W AGP1P25376 633 aa7.27□□□□□ -1.25
NDE2YDL085W PUB1P32588 453 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
NDE2YDL085W ORC2P32833 620 aa7.27□□□□□ -1.25
NDE2YDL085W LST4P34239 828 aa7.27□□□□□ -1.25
NDE2YDL085W FMO1P38866 432 aa7.27□□□□□ -1.25
NDE2YDL085W ALP1P38971 573 aa7.27□□□□□ -1.25
NDE2YDL085W RPL10P41805 221 aaKnown RBP7.27□□□□□ -1.25
NDE2YDL085W RPE1P46969 238 aa7.27□□□□□ -1.25
NDE2YDL085W CDH1P53197 566 aa7.27□□□□□ -1.25
NDE2YDL085W SEC13Q04491 297 aaKnown RBP7.27□□□□□ -1.25
NDE2YDL085W DCS1Q06151 350 aa7.27□□□□□ -1.25
NDE2YDL085W ARV1Q06541 321 aa7.27□□□□□ -1.25
NDE2YDL085W FRE3Q08905 711 aa7.27□□□□□ -1.25
NDE2YDL085W YLR099W-AQ3E798 87 aa7.27□□□□□ -1.25
NDE2YDL085W GCN4P03069 281 aa7.27□□□□□ -1.25
NDE2YDL085W EXG1P23776 448 aaKnown RBP7.27□□□□□ -1.25
NDE2YDL085W PRO1P32264 428 aa7.27□□□□□ -1.25
NDE2YDL085W MSS1P32559 526 aaPredicted RBP7.27□□□□□ -1.25
NDE2YDL085W VMA8P32610 256 aaKnown RBP7.27□□□□□ -1.25
NDE2YDL085W RRF1P38771 230 aa7.27□□□□□ -1.25
NDE2YDL085W RRP4P38792 359 aaKnown RBP7.27□□□□□ -1.25
NDE2YDL085W LYS1P38998 373 aaRIP-Chip data7.27□□□□□ -1.25not detected
NDE2YDL085W ELO1P39540 310 aa7.27□□□□□ -1.25
NDE2YDL085W YIL166CP40445 542 aa7.27□□□□□ -1.25
NDE2YDL085W CIN1P40987 1014 aa7.27□□□□□ -1.25
NDE2YDL085W YML096WQ04489 525 aa7.27□□□□□ -1.25
NDE2YDL085W YDL211CQ12121 372 aa7.27□□□□□ -1.25
NDE2YDL085W SPC3Q12133 184 aa7.27□□□□□ -1.25
NDE2YDL085W RPS21BQ3E754 87 aaKnown RBP7.27□□□□□ -1.25
NDE2YDL085W DSF1P0CX08 502 aa7.26□□□□□ -1.25
NDE2YDL085W YNR073CP0CX09 502 aa7.26□□□□□ -1.25
NDE2YDL085W ERD2P18414 219 aa7.26□□□□□ -1.25
NDE2YDL085W YCK1P23291 538 aa7.26□□□□□ -1.25
NDE2YDL085W YMC1P32331 307 aa7.26□□□□□ -1.25
NDE2YDL085W CDC12P32468 407 aaKnown RBP7.26□□□□□ -1.25
NDE2YDL085W CDC13P32797 924 aaKnown RBP7.26□□□□□ -1.25
NDE2YDL085W SKN1P33336 771 aa7.26□□□□□ -1.25
NDE2YDL085W FMP46P36141 133 aaKnown RBP7.26□□□□□ -1.25
NDE2YDL085W APL3P38065 1025 aa7.26□□□□□ -1.25
NDE2YDL085W TRR2P38816 342 aa7.26□□□□□ -1.25
NDE2YDL085W BAT1P38891 393 aaKnown RBP7.26□□□□□ -1.25
NDE2YDL085W MSS4P38994 779 aa7.26□□□□□ -1.25
NDE2YDL085W GID8P40208 455 aa7.26□□□□□ -1.25
NDE2YDL085W YIL108WP40483 696 aaKnown RBP7.26□□□□□ -1.25
NDE2YDL085W LSM1P47017 172 aaKnown RBP7.26□□□□□ -1.25
NDE2YDL085W VOA1P53262 265 aa7.26□□□□□ -1.25
NDE2YDL085W PAU12P53343 120 aa7.26□□□□□ -1.25
NDE2YDL085W HXT11P54862 567 aa7.26□□□□□ -1.25
NDE2YDL085W YPR091CQ06833 770 aa7.26□□□□□ -1.25
NDE2YDL085W MMT2Q08970 484 aa7.26□□□□□ -1.25
NDE2YDL085W FEX2Q08991 375 aa7.26□□□□□ -1.25
NDE2YDL085W YOR289WQ12012 251 aaPredicted RBP7.26□□□□□ -1.25
NDE2YDL085W ATP16Q12165 160 aa7.26□□□□□ -1.25
NDE2YDL085W SKM1Q12469 655 aa7.26□□□□□ -1.25
NDE2YDL085W TAO3P40468 2376 aa7.25□□□□□ -1.25
NDE2YDL085W RPS18AP0CX55 146 aaKnown RBP7.25□□□□□ -1.25
NDE2YDL085W RPS18BP0CX56 146 aaPredicted RBP7.25□□□□□ -1.25
NDE2YDL085W RPA135P22138 1203 aaKnown RBP7.25□□□□□ -1.25
NDE2YDL085W FUN26P31381 517 aa7.25□□□□□ -1.25
NDE2YDL085W RML2P32611 393 aa7.25□□□□□ -1.25
NDE2YDL085W ECT1P33412 323 aa7.25□□□□□ -1.25
NDE2YDL085W ANR2P36090 516 aaPredicted RBP7.25□□□□□ -1.25
NDE2YDL085W VPS51P36116 164 aa7.25□□□□□ -1.25
NDE2YDL085W PTI1P39927 425 aaPredicted RBP7.25□□□□□ -1.25
NDE2YDL085W SWM2P40342 146 aa7.25□□□□□ -1.25
NDE2YDL085W LRO1P40345 661 aa7.25□□□□□ -1.25
NDE2YDL085W YIL165CP40446 119 aa7.25□□□□□ -1.25
NDE2YDL085W ICE2P40499 491 aa7.25□□□□□ -1.25
NDE2YDL085W PKP1P40530 394 aa7.25□□□□□ -1.25
NDE2YDL085W DPB11P47027 764 aaPredicted RBP7.25□□□□□ -1.25
NDE2YDL085W UBC12P52491 188 aa7.25□□□□□ -1.25
NDE2YDL085W REC102Q02721 264 aa7.25□□□□□ -1.25
NDE2YDL085W CTL1Q03220 320 aaKnown RBP7.25□□□□□ -1.25
NDE2YDL085W PRM15Q03262 622 aa7.25□□□□□ -1.25
NDE2YDL085W ATG41Q12048 136 aa7.25□□□□□ -1.25
NDE2YDL085W TIR4Q12218 487 aaPredicted RBP7.25□□□□□ -1.25
NDE2YDL085W YGR161W-CQ3E744 92 aa7.25□□□□□ -1.25
NDE2YDL085W YIL002W-AQ3E7Z5 69 aa7.25□□□□□ -1.25
NDE2YDL085W DET1Q99288 334 aaKnown RBP7.25□□□□□ -1.25
NDE2YDL085W YBR085C-AO43137 85 aa7.24□□□□□ -1.25
NDE2YDL085W CAN1P04817 590 aa7.24□□□□□ -1.25
NDE2YDL085W NHP6BP11633 99 aaKnown RBP7.24□□□□□ -1.25
NDE2YDL085W ITR1P30605 584 aa7.24□□□□□ -1.25
NDE2YDL085W SDS22P36047 338 aa7.24□□□□□ -1.25
NDE2YDL085W PAU24P38155 120 aa7.24□□□□□ -1.25
NDE2YDL085W RTC2P38279 296 aa7.24□□□□□ -1.25
NDE2YDL085W MNL1P38888 796 aa7.24□□□□□ -1.25
NDE2YDL085W TIR3P40552 269 aa7.24□□□□□ -1.25
NDE2YDL085W SSN8P47821 323 aa7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms