RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C CBK1P53894 756 aa1.02□□□□□ -2.25
VAM6YDL077C NRK1P53915 240 aa1.02□□□□□ -2.25
VAM6YDL077C IDP3P53982 420 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C TGL2P54857 326 aa1.02□□□□□ -2.25
VAM6YDL077C RPS15Q01855 142 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C NUP100Q02629 959 aa1.02□□□□□ -2.25
VAM6YDL077C NAN1Q02931 896 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C YML018CQ03730 393 aa1.02□□□□□ -2.25
VAM6YDL077C YDR387CQ04162 555 aa1.02□□□□□ -2.25
VAM6YDL077C ARG7Q04728 441 aa1.02□□□□□ -2.25
VAM6YDL077C SCW10Q04951 389 aa1.02□□□□□ -2.25
VAM6YDL077C RNH202Q05635 350 aa1.02□□□□□ -2.25
VAM6YDL077C YPR147CQ06522 304 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C SUE1Q06524 206 aa1.02□□□□□ -2.25
VAM6YDL077C AIM6Q07716 390 aa1.02□□□□□ -2.25
VAM6YDL077C SPO75Q07798 868 aa1.02□□□□□ -2.25
VAM6YDL077C COQ10Q08058 207 aa1.02□□□□□ -2.25
VAM6YDL077C RRT8Q08219 342 aa1.02□□□□□ -2.25
VAM6YDL077C DIA2Q08496 732 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C RRG7Q08774 242 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C FDH1Q08911 376 aa1.02□□□□□ -2.25
VAM6YDL077C YPL260WQ08977 551 aa1.02□□□□□ -2.25
VAM6YDL077C SRL2Q12020 392 aa1.02□□□□□ -2.25
VAM6YDL077C RTK1Q12100 620 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C PER33Q12144 273 aa1.02□□□□□ -2.25
VAM6YDL077C POM33Q12164 279 aa1.02□□□□□ -2.25
VAM6YDL077C SFM1Q12314 213 aa1.02□□□□□ -2.25
VAM6YDL077C ORT1Q12375 292 aa1.02□□□□□ -2.25
VAM6YDL077C YDL199CQ12407 687 aa1.02□□□□□ -2.25
VAM6YDL077C RPL13AQ12690 199 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C TMA7Q3E764 64 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C YLR099W-AQ3E798 87 aa1.02□□□□□ -2.25
VAM6YDL077C ATG40Q99325 256 aa1.02□□□□□ -2.25
VAM6YDL077C FSH3Q99369 266 aa1.02□□□□□ -2.25
VAM6YDL077C TDH2P00358 332 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C TDH3P00359 332 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
VAM6YDL077C ADH3P07246 375 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C ATP1P07251 545 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C TRP4P07285 380 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C MET3P08536 511 aa1.02□□□□□ -2.25
VAM6YDL077C MRP1P10662 321 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C SEC12P11655 471 aa1.02□□□□□ -2.25
VAM6YDL077C TCP1P12612 559 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C REV1P12689 985 aa1.02□□□□□ -2.25
VAM6YDL077C HAP3P13434 144 aa1.02□□□□□ -2.25
VAM6YDL077C ACO1P19414 778 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
VAM6YDL077C COX11P19516 300 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C SCL1P21243 252 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C SRM1P21827 482 aa1.02□□□□□ -2.25
VAM6YDL077C RFA1P22336 621 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C RRP7P25368 297 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C PUP3P25451 205 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C STP22P25604 385 aa1.02□□□□□ -2.25
VAM6YDL077C URK1P27515 501 aa1.02□□□□□ -2.25
VAM6YDL077C TRR1P29509 319 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C FUN26P31381 517 aa1.02□□□□□ -2.25
VAM6YDL077C ACB1P31787 87 aa1.02□□□□□ -2.25
VAM6YDL077C MSK1P32048 576 aa1.02□□□□□ -2.25
VAM6YDL077C AFG1P32317 509 aa1.02□□□□□ -2.25
VAM6YDL077C HMX1P32339 317 aa1.02□□□□□ -2.25
VAM6YDL077C SUA5P32579 426 aa1.02□□□□□ -2.25
VAM6YDL077C RGT1P32862 1170 aa1.02□□□□□ -2.25
VAM6YDL077C SUR1P33300 382 aa1.02□□□□□ -2.25
VAM6YDL077C CSG2P35206 410 aa1.02□□□□□ -2.25
VAM6YDL077C VBA5P36172 582 aa1.02□□□□□ -2.25
VAM6YDL077C APT2P36973 181 aa1.02□□□□□ -2.25
VAM6YDL077C SOL2P37262 315 aa1.02□□□□□ -2.25
VAM6YDL077C YMC2P38087 329 aa1.02□□□□□ -2.25
VAM6YDL077C BNA4P38169 460 aa1.02□□□□□ -2.25
VAM6YDL077C CHS7P38843 316 aa1.02□□□□□ -2.25
VAM6YDL077C GPI16P38875 610 aa1.02□□□□□ -2.25
VAM6YDL077C EDC3P39998 551 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C HMF1P40037 129 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C FET4P40988 552 aa1.02□□□□□ -2.25
VAM6YDL077C GSM1P42950 618 aa1.02□□□□□ -2.25
VAM6YDL077C CHA4P43634 648 aa1.02□□□□□ -2.25
VAM6YDL077C SNG1P46950 547 aa1.02□□□□□ -2.25
VAM6YDL077C IDS2P46958 469 aa1.02□□□□□ -2.25
VAM6YDL077C HIT1P46973 164 aa1.02□□□□□ -2.25
VAM6YDL077C AIM22P47051 409 aa1.02□□□□□ -2.25
VAM6YDL077C HMS2P47175 358 aa1.02□□□□□ -2.25
VAM6YDL077C ASN2P49090 572 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C FOL2P51601 243 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C AIF1P52923 378 aa1.02□□□□□ -2.25
VAM6YDL077C SEH1P53011 349 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C YGL117WP53133 265 aa1.02□□□□□ -2.25
VAM6YDL077C TYW3P53177 273 aa1.02□□□□□ -2.25
VAM6YDL077C FMP48P53233 369 aa1.02□□□□□ -2.25
VAM6YDL077C YGR066CP53242 292 aa1.02□□□□□ -2.25
VAM6YDL077C SHY1P53266 389 aa1.02□□□□□ -2.25
VAM6YDL077C ERV29P53337 310 aa1.02□□□□□ -2.25
VAM6YDL077C MPP6P53725 186 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C BIO5P53744 561 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C IGO1P53897 168 aa1.02□□□□□ -2.25
VAM6YDL077C EOS1P53938 366 aa1.02□□□□□ -2.25
VAM6YDL077C RSM23Q01163 450 aa1.02□□□□□ -2.25
VAM6YDL077C IRC15Q02733 499 aa1.02□□□□□ -2.25
VAM6YDL077C SNO1Q03144 224 aa1.02□□□□□ -2.25
VAM6YDL077C YAP6Q03935 383 aa1.02□□□□□ -2.25
VAM6YDL077C CTK1Q03957 528 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms