RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	SNQ2	P32568	1501 aa	Known RBP	3.18	□□□□□ -1.9
RPN4	YDL020C	RPO31	P04051	1460 aa		3.18	□□□□□ -1.9
RPN4	YDL020C	RBK1	P25332	333 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	BUD2	P33314	1104 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	YBR241C	P38142	488 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	MNN9	P39107	395 aa	Known RBP	3.17	□□□□□ -1.9
RPN4	YDL020C	UTP25	P40498	721 aa	Known RBP	3.17	□□□□□ -1.9
RPN4	YDL020C	YJR054W	P47114	497 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	PGU1	P47180	361 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	YGR015C	P53208	328 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	VHT1	P53241	593 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	MRPS16	Q02608	121 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	YDR115W	Q04598	105 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	YOR376W	Q08900	122 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	RPL21B	Q12672	160 aa	Known RBP	3.17	□□□□□ -1.9
RPN4	YDL020C	FOL3	Q12676	427 aa	Predicted RBP	3.17	□□□□□ -1.9
RPN4	YDL020C	TOP2	P06786	1428 aa	Known RBP	3.17	□□□□□ -1.9
RPN4	YDL020C	ACB1	P31787	87 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	SMF2	P38778	549 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	RIB4	P50861	169 aa	Predicted RBP	3.17	□□□□□ -1.9
RPN4	YDL020C	YPS5	P53057	165 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	HCH1	P53834	153 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	RNH201	P53942	307 aa		3.17	□□□□□ -1.9
RPN4	YDL020C	PAA1	Q12447	191 aa	Known RBP	3.17	□□□□□ -1.9
RPN4	YDL020C	ITR2	P30606	609 aa		3.16	□□□□□ -1.9
RPN4	YDL020C	SHE1	P38200	338 aa		3.16	□□□□□ -1.9
RPN4	YDL020C	DBP6	P53734	629 aa	Known RBP	3.16	□□□□□ -1.9
RPN4	YDL020C	TAF10	Q12030	206 aa		3.16	□□□□□ -1.9
RPN4	YDL020C	STH1	P32597	1359 aa		3.15	□□□□□ -1.9
RPN4	YDL020C	SAL1	D6W196	494 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	MSS116	P15424	664 aa	Known RBP	3.15	□□□□□ -1.91
RPN4	YDL020C	URA10	P30402	227 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	PRS1	P32895	427 aa	Known RBP	3.15	□□□□□ -1.91
RPN4	YDL020C	YKL162C	P36052	402 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	PEX22	P39718	180 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	PCL7	P40186	285 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	INA22	P40576	216 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	PAN1	P32521	1480 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	YCF1	P39109	1515 aa	Known RBP	3.15	□□□□□ -1.91
RPN4	YDL020C	PEP1	P32319	1579 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	PSK1	P31374	1356 aa		3.15	□□□□□ -1.91
RPN4	YDL020C	MEI5	P32489	222 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	MRPL27	P36526	146 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN4	YDL020C	FET3	P38993	636 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	STB1	P42845	420 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	YGL262W	P53054	175 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	VOA1	P53262	265 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	MKC7	P53379	596 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	ARP5	P53946	755 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	KTR6	P54070	446 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	SCS7	Q03529	384 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	SLF1	Q12034	447 aa	Known RBP	3.14	□□□□□ -1.91
RPN4	YDL020C	SRO7	Q12038	1033 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	LDB17	Q12342	491 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	YPR1	Q12458	312 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	PDR15	Q04182	1529 aa	Known RBP	3.14	□□□□□ -1.91
RPN4	YDL020C	MLP2	P40457	1679 aa		3.14	□□□□□ -1.91
RPN4	YDL020C	GEA1	P47102	1408 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN4	YDL020C	CAR2	P07991	424 aa	Known RBP	3.13	□□□□□ -1.91
RPN4	YDL020C	ASP3-2	P0CX77	362 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	ASP3-3	P0CX78	362 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	ASP3-4	P0CX79	362 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	ASP3-1	P0CZ17	362 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	PDC2	P32896	925 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	RPS0A	P32905	252 aa	Known RBP	3.13	□□□□□ -1.91
RPN4	YDL020C	YKL071W	P36086	256 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	MRPL40	P36534	297 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	LOC1	P43586	204 aa	Predicted RBP	3.13	□□□□□ -1.91
RPN4	YDL020C	TPS1	Q00764	495 aa	Known RBP	3.13	□□□□□ -1.91
RPN4	YDL020C	RMI1	Q02685	241 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	MRX11	Q03079	207 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	VAC14	Q06708	880 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	DCP1	Q12517	231 aa	Predicted RBP	3.13	□□□□□ -1.91
RPN4	YDL020C	KOG1	P38873	1557 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	ULS1	Q08562	1619 aa		3.13	□□□□□ -1.91
RPN4	YDL020C	SOD1	P00445	154 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	REP1	P03871	373 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	CTA1	P15202	515 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	DBP3	P20447	523 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	SAR1	P20606	190 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	DAL80	P26343	269 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	ECT1	P33412	323 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	DTR1	P38125	572 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	SHE3	P38272	425 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	CHL4	P38907	458 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	FHL1	P39521	936 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	CDC40	P40968	455 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	RPL21A	Q02753	160 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	RRG8	Q06109	277 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	SAM4	Q08985	325 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	PFK27	Q12471	397 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	TSC11	P40061	1430 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	CBP6	P07253	162 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	KTI12	P34253	313 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	MRP21	P38175	177 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	LOH1	P47055	219 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	IRC4	Q03036	179 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	YMR111C	Q04461	462 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	FAR10	Q06001	478 aa		3.12	□□□□□ -1.91
RPN4	YDL020C	MCH1	Q07376	486 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms