RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeast

Gene SWD3, Length 948 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD3	YBR175W	IKI3	Q06706	1349 aa	Known RBP	2.62	□□□□□ -1.99
SWD3	YBR175W	HIS1	P00498	297 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	REV1	P12689	985 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	HPR1	P17629	752 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	SAM2	P19358	384 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	VMA6	P32366	345 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	NUP2	P32499	720 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	GLC7	P32598	312 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	IES6	P32617	166 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	PRP18	P33411	251 aa	Predicted RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	SIP2	P34164	415 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	RIB1	P38066	345 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	CHK1	P38147	527 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	RTC3	P38804	111 aa	Predicted RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	MST28	P39552	234 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	YHB1	P39676	399 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	RMR1	P53060	241 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	TRM112	P53738	135 aa	Predicted RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	COS1	P53822	381 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	IDP3	P53982	420 aa	Known RBP	2.61	□□□□□ -1.99
SWD3	YBR175W	NUP116	Q02630	1113 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	RSC9	Q03124	581 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	KRE28	Q04431	385 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	BCH1	Q05029	724 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	RTT103	Q05543	409 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	ASR1	Q06834	288 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	YOR387C	Q08910	206 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	DAP1	Q12091	152 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	POM33	Q12164	279 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	RGT2	Q12300	763 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	YBL111C	Q3E7Y5	667 aa		2.61	□□□□□ -1.99
SWD3	YBR175W	PAN1	P32521	1480 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	THP2	O13539	261 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	ILV1	P00927	576 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	RPL31A	P0C2H8	113 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	RPL42A	P0CX27	106 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	RPL42B	P0CX28	106 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	MATALPHA2	P0CY08	210 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	HMLALPHA2	P0CY09	210 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	STE18	P18852	110 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	RPO26	P20435	155 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	SLY1	P22213	666 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	CBT1	P36038	271 aa	Predicted RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	MRPL10	P36520	322 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	SCO2	P38072	301 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	MIC12	P38341	106 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	RCK2	P38623	610 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	RRP3	P38712	501 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	YHR035W	P38769	630 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	HAT2	P39984	401 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	PCL6	P40038	420 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	DDI1	P40087	428 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	AZF1	P41696	914 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	SNO3	P43544	222 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	SAD1	P43589	448 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	RRT5	P43607	289 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	TIS11	P47977	285 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	LSG1	P53145	640 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	LIF1	P53150	421 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	REX2	P54964	269 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	YPL077C	Q02831	240 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	VBA1	Q04301	562 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	YMR226C	Q05016	267 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	DCR2	Q05924	578 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	YRA1	Q12159	226 aa	Known RBP	2.6	□□□□□ -1.99
SWD3	YBR175W	SNF8	Q12483	233 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	CMC2	Q3E7A4	109 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	SEY1	Q99287	776 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	IZH4	Q99393	312 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	RAD9	P14737	1309 aa		2.6	□□□□□ -1.99
SWD3	YBR175W	SCC2	Q04002	1493 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	TCP1	P12612	559 aa	Known RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	CBF1	P17106	351 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	YCR022C	P25620	114 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	KAR9	P32526	644 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	MUD1	P32605	298 aa	Known RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	PTR2	P32901	601 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	MRPL6	P32904	214 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	ATO2	P32907	282 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	YKL063C	P35725	167 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	PRS2	P38620	318 aa	Known RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	FLO5	P38894	1075 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	ERG28	P40030	148 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	YIL169C	P40442	995 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	XBP1	P40489	647 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	YIL024C	P40543	189 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	YIA6	P40556	373 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	CFD1	P40558	293 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	YIR016W	P40572	265 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	TES1	P41903	349 aa	Known RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	YRB1	P41920	201 aa	Known RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	CTK3	P46963	296 aa	Predicted RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	TAD2	P47058	250 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	RPC17	P47076	161 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	CWC23	P52868	283 aa	Predicted RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	MST27	P53176	234 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	CPD1	P53314	239 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	ZRG17	P53735	605 aa		2.59	□□□□□ -1.99
SWD3	YBR175W	YDR415C	Q04033	374 aa	Predicted RBP	2.59	□□□□□ -1.99
SWD3	YBR175W	YEH2	Q07950	538 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms