RNA–Protein interactions for RNA: YBR065C

ECM2, Transcript of Pre-mRNA splicing factor, yeast

Gene ECM2, Length 1,095 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM2	YBR065C	CYM1	P32898	989 aa		4.96	□□□□□ -1.62
ECM2	YBR065C	BIG1	P38813	335 aa		4.96	□□□□□ -1.62
ECM2	YBR065C	HAC1	P41546	238 aa		4.96	□□□□□ -1.62
ECM2	YBR065C	ATG38	Q05789	226 aa	Known RBP	4.96	□□□□□ -1.62
ECM2	YBR065C	SMC5	Q08204	1093 aa		4.96	□□□□□ -1.62
ECM2	YBR065C	COX2	P00410	251 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	MER1	P16523	270 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	MET16	P18408	261 aa	Predicted RBP	4.95	□□□□□ -1.62
ECM2	YBR065C	YHR035W	P38769	630 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	MSS2	P40990	351 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	MRPL50	P53724	139 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	GIM3	P53900	129 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	ALE1	Q08548	619 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	TMS1	Q12116	473 aa		4.95	□□□□□ -1.62
ECM2	YBR065C	NAM2	P11325	894 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	SEC1	P30619	724 aa	Known RBP	4.94	□□□□□ -1.62
ECM2	YBR065C	YKL063C	P35725	167 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	AVT5	P38176	459 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	COA1	P40452	197 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	YIA6	P40556	373 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	LSG1	P53145	640 aa	Known RBP	4.94	□□□□□ -1.62
ECM2	YBR065C	PGA2	P53903	129 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	ALG11	P53954	548 aa	Known RBP	4.94	□□□□□ -1.62
ECM2	YBR065C	TDA1	Q03533	586 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	ADH6	Q04894	360 aa	Known RBP	4.94	□□□□□ -1.62
ECM2	YBR065C	ERP1	Q05359	219 aa	Known RBP	4.94	□□□□□ -1.62
ECM2	YBR065C	PAM18	Q07914	168 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	YOR387C	Q08910	206 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	DAP1	Q12091	152 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	FCY22	Q12119	530 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	ATG31	Q12421	196 aa		4.94	□□□□□ -1.62
ECM2	YBR065C	TRP1	P00912	224 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	CDC36	P06100	191 aa	Predicted RBP	4.93	□□□□□ -1.62
ECM2	YBR065C	ERD1	P16151	362 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	HEM15	P16622	393 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	SIP3	P38717	1229 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	YFL040W	P43562	540 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	SCS3	P53012	380 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	CPD1	P53314	239 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	YPL077C	Q02831	240 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	MYO5	Q04439	1219 aa	Known RBP	4.93	□□□□□ -1.62
ECM2	YBR065C	HCR1	Q05775	265 aa	Known RBP	4.93	□□□□□ -1.62
ECM2	YBR065C	YPR091C	Q06833	770 aa		4.93	□□□□□ -1.62
ECM2	YBR065C	HIS1	P00498	297 aa	Known RBP	4.92	□□□□□ -1.62
ECM2	YBR065C	SPS100	P13130	326 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	RRT12	P25381	491 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	RPL16B	P26785	198 aa	Known RBP	4.92	□□□□□ -1.62
ECM2	YBR065C	SPO23	P33757	523 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	YAR1	P46683	200 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	REX2	P54964	269 aa	Known RBP	4.92	□□□□□ -1.62
ECM2	YBR065C	OST6	Q03723	332 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	SNX41	Q04053	625 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	GTO3	Q04806	366 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	GRS2	Q06817	618 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	YDL109C	Q12103	647 aa		4.92	□□□□□ -1.62
ECM2	YBR065C	RRP42	Q12277	265 aa	Predicted RBP	4.92	□□□□□ -1.62
ECM2	YBR065C	UTP23	Q12339	254 aa	Known RBP	4.92	□□□□□ -1.62
ECM2	YBR065C	ATP6	P00854	259 aa		4.91	□□□□□ -1.62
ECM2	YBR065C	RPL31A	P0C2H8	113 aa	Known RBP	4.91	□□□□□ -1.62
ECM2	YBR065C	MATALPHA1	P0CY06	175 aa		4.91	□□□□□ -1.62
ECM2	YBR065C	HMLALPHA1	P0CY07	175 aa		4.91	□□□□□ -1.62
ECM2	YBR065C	MCK1	P21965	375 aa	Known RBP	4.91	□□□□□ -1.62
ECM2	YBR065C	PRM5	P40476	318 aa		4.91	□□□□□ -1.62
ECM2	YBR065C	HIT1	P46973	164 aa		4.91	□□□□□ -1.62
ECM2	YBR065C	MTQ1	P53944	314 aa		4.91	□□□□□ -1.62
ECM2	YBR065C	RTN1	Q04947	295 aa	Known RBP	4.91	□□□□□ -1.62
ECM2	YBR065C	TSR1	Q07381	788 aa	Known RBP	4.91	□□□□□ -1.62
ECM2	YBR065C	CYC3	P06182	269 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	RPL23A	P0CX41	137 aa	Known RBP	4.9	□□□□□ -1.63
ECM2	YBR065C	RPL23B	P0CX42	137 aa	Known RBP	4.9	□□□□□ -1.63
ECM2	YBR065C	CTA1	P15202	515 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	HPR1	P17629	752 aa	Known RBP	4.9	□□□□□ -1.63
ECM2	YBR065C	RNA14	P25298	677 aa	Known RBP	4.9	□□□□□ -1.63
ECM2	YBR065C	NDT80	P38830	627 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	OTU1	P43558	301 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	CIN2	P46670	268 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	SWC4	P53201	476 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	TRM82	Q03774	444 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	GAS2	Q06135	555 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	SDO1	Q07953	250 aa	Known RBP	4.9	□□□□□ -1.63
ECM2	YBR065C	YGK3	Q12222	375 aa	Predicted RBP	4.9	□□□□□ -1.63
ECM2	YBR065C	RPN6	Q12377	434 aa		4.9	□□□□□ -1.63
ECM2	YBR065C	TDH2	P00358	332 aa	Known RBP	4.89	□□□□□ -1.63
ECM2	YBR065C	HEM4	P06174	275 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	RPS14A	P06367	137 aa	Known RBP	4.89	□□□□□ -1.63
ECM2	YBR065C	PPA2	P28239	310 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	PRS4	P38063	326 aa	Predicted RBP	4.89	□□□□□ -1.63
ECM2	YBR065C	LDB7	P38210	180 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	RPS14B	P39516	138 aa	Known RBP	4.89	□□□□□ -1.63
ECM2	YBR065C	YJL213W	P40896	331 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	MST27	P53176	234 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	NDD1	Q08887	554 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	FRE8	Q12209	686 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	HMS1	Q12398	434 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	TFC7	Q12415	435 aa		4.89	□□□□□ -1.63
ECM2	YBR065C	RPS18A	P0CX55	146 aa	Known RBP	4.88	□□□□□ -1.63
ECM2	YBR065C	RPS18B	P0CX56	146 aa	Predicted RBP	4.88	□□□□□ -1.63
ECM2	YBR065C	CPR4	P25334	318 aa		4.88	□□□□□ -1.63
ECM2	YBR065C	INO2	P26798	304 aa		4.88	□□□□□ -1.63
ECM2	YBR065C	NUP2	P32499	720 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms