RNA–Protein interactions for RNA: YBL078C

ATG8, Transcript of Component of autophagosomes and Cvt vesicles, yeastyeast

Gene ATG8, Length 354 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG8YBL078C TDH2P00358 332 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C RPL22AP05749 121 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C AMD1P15274 810 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C FUS3P16892 353 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C MDM10P18409 493 aa3.85□□□□□ -1.79
ATG8YBL078C ARF2P19146 181 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C YCP4P25349 247 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C GCG1P32656 232 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C SKT5P34226 696 aa3.85□□□□□ -1.79
ATG8YBL078C SPC34P36131 295 aa3.85□□□□□ -1.79
ATG8YBL078C YPK3P38070 525 aa3.85□□□□□ -1.79
ATG8YBL078C IST2P38250 946 aa3.85□□□□□ -1.79
ATG8YBL078C PHO88P38264 188 aaPredicted RBP3.85□□□□□ -1.79
ATG8YBL078C SNM1P40993 198 aa3.85□□□□□ -1.79
ATG8YBL078C YGR210CP42942 411 aa3.85□□□□□ -1.79
ATG8YBL078C MRX5P47007 382 aa3.85□□□□□ -1.79
ATG8YBL078C YPT11P48559 417 aa3.85□□□□□ -1.79
ATG8YBL078C SEH1P53011 349 aaKnown RBP3.85□□□□□ -1.79
ATG8YBL078C TAF6P53040 516 aa3.85□□□□□ -1.79
ATG8YBL078C PXR1P53335 271 aaPredicted RBP3.85□□□□□ -1.79
ATG8YBL078C YNR048WP53740 393 aa3.85□□□□□ -1.79
ATG8YBL078C IRC15Q02733 499 aa3.85□□□□□ -1.79
ATG8YBL078C YMR209CQ03648 457 aa3.85□□□□□ -1.79
ATG8YBL078C MRPL51Q06090 140 aaPredicted RBP3.85□□□□□ -1.79
ATG8YBL078C GMC2Q06201 188 aa3.85□□□□□ -1.79
ATG8YBL078C GAT3Q07928 141 aa3.85□□□□□ -1.79
ATG8YBL078C YAP7Q08182 245 aa3.85□□□□□ -1.79
ATG8YBL078C RAX1Q08760 435 aa3.85□□□□□ -1.79
ATG8YBL078C TEF1P02994 458 aaKnown RBP3.84□□□□□ -1.79
ATG8YBL078C SSC1P0CS90 654 aaKnown RBP3.84□□□□□ -1.79
ATG8YBL078C EXO70P19658 623 aa3.84□□□□□ -1.79
ATG8YBL078C MBR1P23493 339 aa3.84□□□□□ -1.79
ATG8YBL078C SRB4P32569 687 aa3.84□□□□□ -1.79
ATG8YBL078C LOS1P33418 1100 aaPredicted RBP3.84□□□□□ -1.79
ATG8YBL078C YNK1P36010 153 aaKnown RBP3.84□□□□□ -1.79
ATG8YBL078C DTR1P38125 572 aa3.84□□□□□ -1.79
ATG8YBL078C COX16P47081 118 aa3.84□□□□□ -1.79
ATG8YBL078C AZR1P50080 613 aa3.84□□□□□ -1.79
ATG8YBL078C LST7P53237 242 aa3.84□□□□□ -1.79
ATG8YBL078C RTC4P53850 401 aa3.84□□□□□ -1.79
ATG8YBL078C ARK1P53974 638 aa3.84□□□□□ -1.79
ATG8YBL078C STP1Q00947 519 aa3.84□□□□□ -1.79
ATG8YBL078C YPL080CQ02826 108 aa3.84□□□□□ -1.79
ATG8YBL078C ENT5Q03769 411 aaKnown RBP3.84□□□□□ -1.79
ATG8YBL078C PAM18Q07914 168 aa3.84□□□□□ -1.79
ATG8YBL078C SLF1Q12034 447 aaKnown RBP3.84□□□□□ -1.79
ATG8YBL078C TIP41Q12199 356 aa3.84□□□□□ -1.79
ATG8YBL078C ERP3Q12403 225 aa3.84□□□□□ -1.79
ATG8YBL078C DET1Q99288 334 aaKnown RBP3.84□□□□□ -1.79
ATG8YBL078C VPS1P21576 704 aaKnown RBP3.83□□□□□ -1.8
ATG8YBL078C MRPL8P22353 238 aa3.83□□□□□ -1.8
ATG8YBL078C RRT12P25381 491 aa3.83□□□□□ -1.8
ATG8YBL078C TIP1P27654 210 aaPredicted RBP3.83□□□□□ -1.8
ATG8YBL078C MKK1P32490 508 aa3.83□□□□□ -1.8
ATG8YBL078C SWD2P36104 329 aaPredicted RBP3.83□□□□□ -1.8
ATG8YBL078C GPX2P38143 162 aa3.83□□□□□ -1.8
ATG8YBL078C LDB7P38210 180 aa3.83□□□□□ -1.8
ATG8YBL078C FHL1P39521 936 aa3.83□□□□□ -1.8
ATG8YBL078C COA1P40452 197 aa3.83□□□□□ -1.8
ATG8YBL078C YCH1P42937 148 aa3.83□□□□□ -1.8
ATG8YBL078C AGP3P43548 558 aa3.83□□□□□ -1.8
ATG8YBL078C HIT1P46973 164 aa3.83□□□□□ -1.8
ATG8YBL078C GWT1P47026 490 aa3.83□□□□□ -1.8
ATG8YBL078C LIF1P53150 421 aa3.83□□□□□ -1.8
ATG8YBL078C OKP1P53298 406 aa3.83□□□□□ -1.8
ATG8YBL078C MKC7P53379 596 aa3.83□□□□□ -1.8
ATG8YBL078C TDA7P53882 636 aaPredicted RBP3.83□□□□□ -1.8
ATG8YBL078C SNZ1Q03148 297 aa3.83□□□□□ -1.8
ATG8YBL078C YDL009CQ12210 107 aa3.83□□□□□ -1.8
ATG8YBL078C DDP1Q99321 188 aaKnown RBP3.83□□□□□ -1.8
ATG8YBL078C JIP3O13555 125 aa3.82□□□□□ -1.8
ATG8YBL078C PGK1P00560 416 aaKnown RBP3.82□□□□□ -1.8
ATG8YBL078C CAP2P13517 287 aa3.82□□□□□ -1.8
ATG8YBL078C MET16P18408 261 aaPredicted RBP3.82□□□□□ -1.8
ATG8YBL078C CKA2P19454 339 aa3.82□□□□□ -1.8
ATG8YBL078C EXG1P23776 448 aaKnown RBP3.82□□□□□ -1.8
ATG8YBL078C PUT3P25502 979 aaPredicted RBP3.82□□□□□ -1.8
ATG8YBL078C BMH1P29311 267 aaKnown RBP3.82□□□□□ -1.8
ATG8YBL078C MCR1P36060 302 aaKnown RBP3.82□□□□□ -1.8
ATG8YBL078C MAL32P38158 584 aa3.82□□□□□ -1.8
ATG8YBL078C GEP4P38812 185 aa3.82□□□□□ -1.8
ATG8YBL078C RBG1P39729 369 aa3.82□□□□□ -1.8
ATG8YBL078C MAL12P53341 584 aa3.82□□□□□ -1.8
ATG8YBL078C NOP13P53883 403 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
ATG8YBL078C SLT2Q00772 484 aa3.82□□□□□ -1.8
ATG8YBL078C ODC1Q03028 310 aa3.82□□□□□ -1.8
ATG8YBL078C CSM3Q04659 317 aa3.82□□□□□ -1.8
ATG8YBL078C SUE1Q06524 206 aa3.82□□□□□ -1.8
ATG8YBL078C BER1Q06688 274 aaKnown RBP3.82□□□□□ -1.8
ATG8YBL078C SDO1Q07953 250 aaKnown RBP3.82□□□□□ -1.8
ATG8YBL078C SMC5Q08204 1093 aa3.82□□□□□ -1.8
ATG8YBL078C TIM18Q08749 192 aa3.82□□□□□ -1.8
ATG8YBL078C MEX67Q99257 599 aaKnown RBP3.82□□□□□ -1.8
ATG8YBL078C PAB1P04147 577 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8 RIP-Chip
ATG8YBL078C RHO1P06780 209 aaKnown RBP3.81□□□□□ -1.8
ATG8YBL078C RPL42AP0CX27 106 aaKnown RBP3.81□□□□□ -1.8
ATG8YBL078C RPL42BP0CX28 106 aaKnown RBP3.81□□□□□ -1.8
ATG8YBL078C APA2P22108 325 aa3.81□□□□□ -1.8
ATG8YBL078C YEF1P32622 495 aa3.81□□□□□ -1.8
ATG8YBL078C PRS4P38063 326 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms