RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 CXorf56Q9H5V9 222 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 KCNH7Q9NS40 1196 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 ARAP2Q8WZ64 1704 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 MYO9BQ13459 2157 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 TMEM150BA6NC51 233 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 PDHXO00330 501 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 HNRNPDLO14979 420 aaKnown RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 USP11P51784 963 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 GFPT1Q06210 699 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 IFT88Q13099 833 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 TRIP13Q15645 432 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 HP1BP3Q5SSJ5 553 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 FBXW10Q5XX13 1052 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 NFRKBQ6P4R8 1299 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 FASTKD5Q7L8L6 764 aaKnown RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 NSUN6Q8TEA1 469 aaKnown RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 POMGNT1Q8WZA1 660 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 ELMO3Q96BJ8 720 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 A1CFQ9NQ94 594 aaKnown RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 SYNJ2BP-COX16A0A087WUM0 186 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 GRXCR2A6NFK2 248 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 KRIT1O00522 736 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 TRIM49P0CI25 452 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 TRIM49CP0CI26 452 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 CCNE1P24864 410 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 MMP14P50281 582 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 TNNC1P63316 161 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 BIRC2Q13490 618 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 MTERF2Q49AM1 385 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 LMBRD2Q68DH5 695 aaPredicted RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 ANKRD40Q6AI12 368 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 BTNL9Q6UXG8 535 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 MMS22LQ6ZRQ5 1243 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 PPP1R13LQ8WUF5 828 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 MS4A14Q96JA4 679 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 NAP1L4Q99733 375 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 NUP58Q9BVL2 599 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 COX16Q9P0S2 106 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 TTLL3Q9Y4R7 772 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 MAFGO15525 162 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 PSMC6P62333 389 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 PPATQ06203 517 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 TRIM14Q14142 442 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 DCUN1D2Q6PH85 259 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 CYFIP1Q7L576 1253 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 OTUD6AQ7L8S5 288 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 KCNK18Q7Z418 384 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 SFR1Q86XK3 245 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 HAS1Q92839 578 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 IFT74Q96LB3 600 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 SPATC1LQ9H0A9 340 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 BTBD7Q9P203 1132 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 LARSQ9P2J5 1176 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 DOCK2Q92608 1830 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 RBM47A0AV96 593 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 EML1O00423 815 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 LAD1O00515 517 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 ACTN4O43707 911 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 MFAP3LO75121 409 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 PARNO95453 639 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 CNGA1P29973 690 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 SCNN1AP37088 669 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 PEX3P56589 373 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 ACTN3Q08043 901 aaPredicted RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 GNPTABQ3T906 1256 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 CFAP221Q4G0U5 840 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 TADA2BQ86TJ2 420 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 SESTD1Q86VW0 696 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 CABS1Q96KC9 395 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 EIF2AK1Q9BQI3 630 aaKnown RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 HAUS4Q9H6D7 363 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 SEPT9Q9UHD8 586 aaPredicted RBP8.17□□□□□ -1.1
RPA1-207ENST00000574049 PGAP2Q9UHJ9 254 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 ODF2LQ9ULJ1 636 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 CEP83Q9Y592 693 aa8.17□□□□□ -1.1
RPA1-207ENST00000574049 POLR2AP24928 1970 aaKnown RBP8.16□□□□□ -1.1
RPA1-207ENST00000574049 MED24O75448 989 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 ATP1A1P05023 1023 aaKnown RBP8.16□□□□□ -1.1
RPA1-207ENST00000574049 PLEKP08567 350 aaPredicted RBP8.16□□□□□ -1.1
RPA1-207ENST00000574049 ATF7P17544 494 aaPredicted RBP8.16□□□□□ -1.1
RPA1-207ENST00000574049 CD58P19256 250 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 STRN3Q13033 797 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 CALCOCO2Q13137 446 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 TRPC3Q13507 836 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 BRD3Q15059 726 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 SWSAP1Q6NVH7 229 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 ZBTB33Q86T24 672 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 MB21D1Q8N884 522 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 MORC4Q8TE76 937 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 LMBR1Q8WVP7 490 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 CEP170P1Q96L14 293 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 MMP19Q99542 508 aa8.16□□□□□ -1.1
RPA1-207ENST00000574049 MOV10L1Q9BXT6 1211 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms