RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 NAGPAQ9UK23 515 aa13.04□□□□□ -0.32
NCDN-202ENST00000373243 MED24O75448 989 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 FGFR4P22455 802 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 SCTRP47872 440 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 KCNJ1P48048 391 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 ZNF543Q08ER8 600 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 KCNMA1Q12791 1236 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 TAF11Q15544 211 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 FIGNQ5HY92 759 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 FAM81AQ8TBF8 368 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 CYFIP2Q96F07 1278 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 AZI2Q9H6S1 392 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 FAM114A2Q9NRY5 505 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 CYP11B2P19099 503 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 CUL3Q13618 768 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 PLCB4Q15147 1175 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 UAP1Q16222 522 aaPredicted RBP13.03□□□□□ -0.32
NCDN-202ENST00000373243 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 MYH10P35580 1976 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 ABCC6O95255 1503 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 ZNF233A6NK53 670 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 TCP10L2B9ZVM9 353 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 IFNB1P01574 187 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 OATP04181 439 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 LMNB1P20700 586 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 ERVK-9P63128 1117 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 HP1BP3Q5SSJ5 553 aaPredicted RBP13.03□□□□□ -0.32
NCDN-202ENST00000373243 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 VSIG1Q86XK7 387 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 TRIM42Q8IWZ5 723 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
NCDN-202ENST00000373243 CLRN2A0PK11 232 aa13.02□□□□□ -0.32
NCDN-202ENST00000373243 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.32
NCDN-202ENST00000373243 TRIM37O94972 964 aa13.02□□□□□ -0.32
NCDN-202ENST00000373243 STX2P32856 288 aa13.02□□□□□ -0.32
NCDN-202ENST00000373243 ADCY8P40145 1251 aa13.02□□□□□ -0.32
NCDN-202ENST00000373243 KCNA1Q09470 495 aa13.02□□□□□ -0.32
NCDN-202ENST00000373243 TEKT4Q8WW24 435 aa13.02□□□□□ -0.32
NCDN-202ENST00000373243 STMN4Q9H169 189 aaPredicted RBP13.02□□□□□ -0.32
NCDN-202ENST00000373243 ABCB5Q2M3G0 1257 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 SPRED3Q2MJR0 410 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 ACBD5Q5T8D3 534 aaPredicted RBP13.02□□□□□ -0.33
NCDN-202ENST00000373243 CWF19L1Q69YN2 538 aaKnown RBP13.02□□□□□ -0.33
NCDN-202ENST00000373243 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 DAGLBQ8NCG7 672 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 BAP1Q92560 729 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 DYDC2Q96IM9 177 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 MYH8P13535 1937 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 CCDC188H7C350 402 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 ATP6V1G1O75348 118 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
NCDN-202ENST00000373243 CASP5P51878 434 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 ECM1Q16610 540 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 KAZNQ674X7 775 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 DPH6Q7L8W6 267 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 CATSPER3Q86XQ3 398 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 ELMO3Q96BJ8 720 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 ZNF653Q96CK0 615 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 CCDC77Q9BR77 488 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 TCHPQ9BT92 498 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 GLT8D2Q9H1C3 349 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 PARVGQ9HBI0 331 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 DBR1Q9UK59 544 aaKnown RBP13.02□□□□□ -0.33
NCDN-202ENST00000373243 PCDHGC5Q9Y5F6 944 aa13.02□□□□□ -0.33
NCDN-202ENST00000373243 AHCYL1O43865 530 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 AKAP3O75969 853 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 GH2P01242 217 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 FTLP02792 175 aaPredicted RBP13.01□□□□□ -0.33
NCDN-202ENST00000373243 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 CYP2W1Q8TAV3 490 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 HEMGNQ9BXL5 484 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 EDEM3Q9BZQ6 932 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 MMADHCQ9H3L0 296 aaPredicted RBP13.01□□□□□ -0.33
NCDN-202ENST00000373243 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 RASSF10A6NK89 507 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 RASGRF2O14827 1237 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 KRT15P19012 456 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 SSTR3P32745 418 aaPredicted RBP13.01□□□□□ -0.33
NCDN-202ENST00000373243 USP11P51784 963 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 ANKRD20A8PQ5CZ79 823 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 NUGGCQ68CJ6 796 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 SH3GL2Q99962 352 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 F5H6K3 240 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 THAP12O43422 761 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
NCDN-202ENST00000373243 FAM107AO95990 144 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 ATP4AP20648 1035 aa13.01□□□□□ -0.33
NCDN-202ENST00000373243 HSPA1LP34931 641 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms