RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ASTN1O14525 1302 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 CCDC194A0A1B0GVG4 234 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 ESYT2A0FGR8 921 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 HMGB1P1B2RPK0 211 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PIK3CDO00329 1044 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 CES2O00748 559 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 ZNF263O14978 683 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 GRK4P32298 578 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 GHRHRQ02643 423 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 TRIM32Q13049 653 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 SLC9C1Q4G0N8 1177 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 VWA3BQ502W6 1294 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PRAMEF19Q5SWL8 479 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 COL13A1Q5TAT6 717 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 CENPPQ6IPU0 288 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 EEPD1Q7L9B9 569 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 ARFGAP2Q8N6H7 521 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 SAMD3Q8N6K7 520 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PCMTD1Q96MG8 357 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 TINF2Q9BSI4 451 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 MCOLN1Q9GZU1 580 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 EPN3Q9H201 632 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PCDHA6Q9UN73 950 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PCDHA8Q9Y5H6 950 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PVALEFA0A1B0GWK0 134 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 NDUFAB1O14561 156 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 FNTAP49354 379 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 LIG3P49916 1009 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 PDE4DQ08499 809 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 MAN2A1Q16706 1144 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 MFSD14CQ5VZR4 134 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 ARMCX2Q7L311 632 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 TAX1BP1Q86VP1 789 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 REXO1Q8N1G1 1221 aaKnown RBP12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 OTUD6BQ8N6M0 293 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 SLAIN1Q8ND83 568 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 DNERQ8NFT8 737 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 RASSF8Q8NHQ8 419 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 KAT2BQ92831 832 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 CABS1Q96KC9 395 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 NOX5Q96PH1 765 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 TRIM9Q9C026 710 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 MAF1Q9H063 256 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 PXMP2Q9NR77 195 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 SIK3Q9Y2K2 1263 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 CAPN6Q9Y6Q1 641 aa12.5□□□□□ -0.41
TSPAN1-201ENST00000372003 ASB14A6NK59 587 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 AKR1B10O60218 316 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 MAGEA1P43355 309 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 CYP27A1Q02318 531 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 ASTE1Q2TB18 679 aaPredicted RBP12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 OLFML2BQ68BL8 750 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 PPP4R3AQ6IN85 833 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 ZNF467Q7Z7K2 595 aaPredicted RBP12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 TSEN2Q8NCE0 465 aaKnown RBP12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 GDAP1L1Q96MZ0 367 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 ZIM3Q96PE6 472 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 DUSP10Q9Y6W6 482 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
TSPAN1-201ENST00000372003 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 HMGCRP04035 888 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 INHAP05111 366 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 NR3C2P08235 984 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 LRRC63Q05C16 580 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 CACNB2Q08289 660 aaPredicted RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 PGM5Q15124 567 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 CABP7Q86V35 215 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 IL31RAQ8NI17 732 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 MPHOSPH6Q99547 160 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 PDCD2LQ9BRP1 358 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 ANO3Q9BYT9 981 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 LRRC27Q9C0I9 530 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 NDST4Q9H3R1 872 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 ACTR5Q9H9F9 607 aaPredicted RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 ANKRD65E5RJM6 399 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 PPP1R37O75864 691 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 MOCS3O95396 460 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 FOSP01100 380 aaPredicted RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 CNGA1P29973 690 aa12.48□□□□□ -0.41
TSPAN1-201ENST00000372003 LSP1P33241 339 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms