RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 TRIM59Q8IWR1 403 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 TMEM106CQ9BVX2 250 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 E9PMD0 336 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 H7C1W4 665 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 PFKFB3Q16875 520 aaPredicted RBP19.15■□□□□ 0.66
SNX27-203ENST00000368843 ACAD9Q9H845 621 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 RABGGTAQ92696 567 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 ANP32DO95626 131 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 ATICP31939 592 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 ATP6V1E1P36543 226 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 KRT31Q15323 416 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 TBCCQ15814 346 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX27-203ENST00000368843 ASIC4Q96FT7 647 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 SYNDIG1Q9H7V2 258 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 TRIM4Q9C037 500 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 EIF4E1BA6NMX2 242 aaKnown RBP19.15■□□□□ 0.66
SNX27-203ENST00000368843 ACBD5Q5T8D3 534 aaPredicted RBP19.15■□□□□ 0.66
SNX27-203ENST00000368843 CYTH2Q99418 400 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 DYRK4Q9NR20 520 aa19.15■□□□□ 0.66
SNX27-203ENST00000368843 POTEB3A0JP26 581 aa19.14■□□□□ 0.66
SNX27-203ENST00000368843 POTECB2RU33 542 aa19.14■□□□□ 0.66
SNX27-203ENST00000368843 RASGRF2O14827 1237 aa19.14■□□□□ 0.66
SNX27-203ENST00000368843 RESTQ13127 1097 aa19.14■□□□□ 0.66
SNX27-203ENST00000368843 POTEBQ6S5H4 581 aa19.14■□□□□ 0.66
SNX27-203ENST00000368843 XXYLT1Q8NBI6 393 aa19.14■□□□□ 0.66
SNX27-203ENST00000368843 RASSF3Q86WH2 238 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 RHOT2Q8IXI1 618 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 ENOX1Q8TC92 643 aaKnown RBP19.14■□□□□ 0.65
SNX27-203ENST00000368843 KIF12Q96FN5 646 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 CTNND1O60716 968 aaKnown RBP19.14■□□□□ 0.65
SNX27-203ENST00000368843 FGGP02679 453 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 LCP1P13796 627 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 TMEM35BQ8NCS4 154 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 PBXIP1Q96AQ6 731 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 GTSE1Q9NYZ3 720 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 ADAMTS1Q9UHI8 967 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 RESP18Q5W5W9 173 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 ALKBH5Q6P6C2 394 aaKnown RBP19.14■□□□□ 0.65
SNX27-203ENST00000368843 SH3KBP1Q96B97 665 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 SAAL1Q96ER3 474 aa19.14■□□□□ 0.65
SNX27-203ENST00000368843 ZCCHC11Q5TAX3 1644 aaKnown RBP19.14■□□□□ 0.65
SNX27-203ENST00000368843 DFFAO00273 331 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 COASYQ13057 564 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 DDX53Q86TM3 631 aaKnown RBP19.13■□□□□ 0.65
SNX27-203ENST00000368843 GIPC2Q8TF65 315 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 MAP3K20Q9NYL2 800 aaKnown RBP19.13■□□□□ 0.65
SNX27-203ENST00000368843 SUFUQ9UMX1 484 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 NOVA2Q9UNW9 492 aaKnown RBP19.13■□□□□ 0.65
SNX27-203ENST00000368843 CCDC195A0A1B0GUA6 201 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 TNPO2O14787 897 aaKnown RBP19.13■□□□□ 0.65
SNX27-203ENST00000368843 CHRNA5P30532 468 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 HOXA7P31268 230 aaPredicted RBP19.13■□□□□ 0.65
SNX27-203ENST00000368843 SFNP31947 248 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 DRC3Q9H069 523 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 PCSK1NQ9UHG2 260 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 POTEFA5A3E0 1075 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 GNA15P30679 374 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 VAMP7P51809 220 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 RBBP7Q16576 425 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 POTEGQ6S5H5 508 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 POTEEQ6S8J3 1075 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 TRIM15Q9C019 465 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 TRIM49BA6NDI0 452 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 CALB1P05937 261 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 SLC8A1P32418 973 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 GRIK1P39086 918 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
SNX27-203ENST00000368843 PALMO75781 387 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 QARSP47897 775 aaKnown RBP19.13■□□□□ 0.65
SNX27-203ENST00000368843 TRAIPQ9BWF2 469 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 IQCA1LA6NCM1 817 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 VEPH1Q14D04 833 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 TTC17Q96AE7 1141 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 SLC4A7Q9Y6M7 1214 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 PRR36Q9H6K5 1346 aa19.13■□□□□ 0.65
SNX27-203ENST00000368843 RBM41Q96IZ5 413 aaKnown RBP19.12■□□□□ 0.65
SNX27-203ENST00000368843 SPON2Q9BUD6 331 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 GJB4Q9NTQ9 266 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 RCOR1Q9UKL0 485 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 CRLF3Q8IUI8 442 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 VSTM4Q8IW00 320 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 NEK9Q8TD19 979 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 ACAP3Q96P50 834 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 LXNQ9BS40 222 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 STRIP2Q9ULQ0 834 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 A8MXQ7 604 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 CASP1P29466 404 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 MTMR2Q13614 643 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 TAS2R42Q7RTR8 314 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 SIK2Q9H0K1 926 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 COG4Q9H9E3 785 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 NDFIP2Q9NV92 336 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 PTK2BQ14289 1009 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 CC2D1AQ6P1N0 951 aaPredicted RBP19.12■□□□□ 0.65
SNX27-203ENST00000368843 SUN2Q9UH99 717 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 TMED1Q13445 227 aa19.12■□□□□ 0.65
SNX27-203ENST00000368843 LZICQ8WZA0 190 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms