RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 ALO1P54783 526 aaKnown RBP2.65□□□□□ -1.99
snR53snR53 NAM8Q00539 523 aaKnown RBP2.65□□□□□ -1.99
snR53snR53 MCA1Q08601 432 aa2.65□□□□□ -1.99
snR53snR53 YCK2P23292 546 aaKnown RBP2.64□□□□□ -1.99
snR53snR53 YNR014WP53719 212 aa2.64□□□□□ -1.99
snR53snR53 ADE12P80210 433 aaKnown RBP2.64□□□□□ -1.99
snR53snR53 CEM1P39525 442 aa2.63□□□□□ -1.99
snR53snR53 CUZ1P53899 274 aa2.63□□□□□ -1.99
snR53snR53 PDC1P06169 563 aaKnown RBP2.62□□□□□ -1.99
snR53snR53 SLN1P39928 1220 aaPredicted RBP2.62□□□□□ -1.99
snR53snR53 AVT1P47082 602 aa2.62□□□□□ -1.99
snR53snR53 OMA1P36163 345 aa2.61□□□□□ -1.99
snR53snR53 MCX1P38323 520 aaPredicted RBP2.61□□□□□ -1.99
snR53snR53 SET1P38827 1080 aaKnown RBP2.6□□□□□ -1.99
snR53snR53 GIS1Q03833 894 aa2.6□□□□□ -1.99
snR53snR53 YDR215CQ12240 137 aa2.6□□□□□ -1.99
snR53snR53 CDC19P00549 500 aaKnown RBP2.58□□□□□ -2
snR53snR53 TAT1P38085 619 aa2.57□□□□□ -2
snR53snR53 YBL086CP38177 466 aa2.56□□□□□ -2
snR53snR53 INP52P50942 1183 aa2.56□□□□□ -2
snR53snR53 YNL115CP53925 644 aa2.56□□□□□ -2
snR53snR53 BOI2P39969 1040 aa2.55□□□□□ -2
snR53snR53 RTF1P53064 558 aa2.55□□□□□ -2
snR53snR53 SYT1Q06836 1226 aa2.53□□□□□ -2
snR53snR53 ALR1Q08269 859 aa2.52□□□□□ -2.01
snR53snR53 REF2P42073 533 aaPredicted RBP2.51□□□□□ -2.01
snR53snR53 YMR265CQ03508 461 aaKnown RBP2.51□□□□□ -2.01
snR53snR53 KRE33P53914 1056 aaKnown RBP2.49□□□□□ -2.01
snR53snR53 APP1P53933 587 aa2.49□□□□□ -2.01
snR53snR53 PRY1P47032 299 aa2.48□□□□□ -2.01
snR53snR53 DIT1P21623 536 aa2.47□□□□□ -2.01
snR53snR53 RPA14P50106 137 aa2.47□□□□□ -2.01
snR53snR53 YPR097WQ06839 1073 aa2.47□□□□□ -2.01
snR53snR53 YDL206WQ12424 762 aa2.47□□□□□ -2.01
snR53snR53 ITT1Q04638 464 aa2.46□□□□□ -2.02
snR53snR53 AOS1Q06624 347 aa2.46□□□□□ -2.02
snR53snR53 COX6P00427 148 aa2.45□□□□□ -2.02
snR53snR53 TBF1Q02457 562 aa2.45□□□□□ -2.02
snR53snR53 MET1P36150 593 aa2.44□□□□□ -2.02
snR53snR53 DFG5Q05031 458 aa2.44□□□□□ -2.02
snR53snR53 YDR461C-AQ2V2P7 80 aa2.44□□□□□ -2.02
snR53snR53 GPM1P00950 247 aaKnown RBP2.43□□□□□ -2.02
snR53snR53 SLY41P22215 453 aa2.43□□□□□ -2.02
snR53snR53 VTC4P47075 721 aa2.43□□□□□ -2.02
snR53snR53 SIT4P20604 311 aa2.42□□□□□ -2.02
snR53snR53 CLB5P30283 435 aa2.42□□□□□ -2.02
snR53snR53 EMW1P42842 904 aaKnown RBP2.41□□□□□ -2.02
snR53snR53 MAK21Q12176 1025 aaKnown RBP2.41□□□□□ -2.02
snR53snR53 VAC17P25591 423 aa2.4□□□□□ -2.03
snR53snR53 MKS1P34072 584 aa2.4□□□□□ -2.03
snR53snR53 UBP5P39944 805 aa2.4□□□□□ -2.03
snR53snR53 NAF1P53919 492 aaKnown RBP2.4□□□□□ -2.03
snR53snR53 BDS1Q08347 646 aa2.4□□□□□ -2.03
snR53snR53 DAL1P32375 460 aa2.39□□□□□ -2.03
snR53snR53 ELM1P32801 640 aa2.39□□□□□ -2.03
snR53snR53 PUS6P53294 404 aa2.39□□□□□ -2.03
snR53snR53 UBP15P50101 1230 aa2.38□□□□□ -2.03
snR53snR53 LIP5P32875 414 aa2.37□□□□□ -2.03
snR53snR53 YKL222CP35995 705 aa2.37□□□□□ -2.03
snR53snR53 PSE1P32337 1089 aaKnown RBP2.36□□□□□ -2.03
snR53snR53 NIS1P53939 407 aa2.35□□□□□ -2.03
snR53snR53 FPS1P23900 669 aa2.34□□□□□ -2.03
snR53snR53 TRM1P15565 570 aaKnown RBP2.32□□□□□ -2.04
snR53snR53 PDC5P16467 563 aaKnown RBP2.32□□□□□ -2.04
snR53snR53 RNQ1P25367 405 aa2.32□□□□□ -2.04
snR53snR53 YCR015CP25616 317 aa2.32□□□□□ -2.04
snR53snR53 KNS1P32350 737 aaPredicted RBP2.32□□□□□ -2.04
snR53snR53 YKR073CP36153 106 aa2.32□□□□□ -2.04
snR53snR53 MED7Q08278 222 aa2.32□□□□□ -2.04
snR53snR53 TRP3P00937 484 aa2.31□□□□□ -2.04
snR53snR53 FBP26P32604 452 aa2.29□□□□□ -2.04
snR53snR53 TPS3P38426 1054 aaKnown RBP2.29□□□□□ -2.04
snR53snR53 TEA1P47988 759 aa2.29□□□□□ -2.04
snR53snR53 STE6P12866 1290 aa2.28□□□□□ -2.04
snR53snR53 TOS1P38288 455 aa2.28□□□□□ -2.04
snR53snR53 CTH1P47976 325 aa2.28□□□□□ -2.04
snR53snR53 YMR196WQ04336 1088 aa2.28□□□□□ -2.04
snR53snR53 SLA1P32790 1244 aa2.27□□□□□ -2.05
snR53snR53 BUB1P41695 1021 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
snR53snR53 BUD9P53226 547 aa2.27□□□□□ -2.05
snR53snR53 FPK1P53739 893 aa2.27□□□□□ -2.05
snR53snR53 PUB1P32588 453 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
snR53snR53 DLD3P39976 496 aaKnown RBP2.26□□□□□ -2.05
snR53snR53 PGM1P33401 570 aaKnown RBP2.25□□□□□ -2.05
snR53snR53 KAE1P36132 386 aa2.25□□□□□ -2.05
snR53snR53 BRE4Q07660 1125 aa2.25□□□□□ -2.05
snR53snR53 TY1A-DR3Q12441 440 aa2.25□□□□□ -2.05
snR53snR53 SCJ1P25303 377 aa2.24□□□□□ -2.05
snR53snR53 COQ2P32378 372 aa2.23□□□□□ -2.05
snR53snR53 MSN5P52918 1224 aa2.23□□□□□ -2.05
snR53snR53 YPR148CQ06523 435 aa2.23□□□□□ -2.05
snR53snR53 YPT53P36019 220 aa2.22□□□□□ -2.05
snR53snR53 AHP1P38013 176 aaKnown RBP2.22□□□□□ -2.05
snR53snR53 SSN3P39073 555 aa2.22□□□□□ -2.05
snR53snR53 VPS70P47161 811 aa2.21□□□□□ -2.06
snR53snR53 TY1A-DR2Q03964 440 aaKnown RBP2.21□□□□□ -2.06
snR53snR53 ESC8Q08119 714 aa2.21□□□□□ -2.06
snR53snR53 GAS5Q08193 484 aa2.21□□□□□ -2.06
snR53snR53 NHA1Q99271 985 aa2.21□□□□□ -2.06
snR53snR53 TAD3Q9URQ3 322 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms