RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YDR215CQ12240 137 aa2.4□□□□□ -2.03
snR50snR50 CDC19P00549 500 aaKnown RBP2.39□□□□□ -2.03
snR50snR50 SLN1P39928 1220 aaPredicted RBP2.39□□□□□ -2.03
snR50snR50 LSB6P42951 607 aa2.39□□□□□ -2.03
snR50snR50 KIC1P38692 1080 aa2.38□□□□□ -2.03
snR50snR50 PDC1P06169 563 aaKnown RBP2.37□□□□□ -2.03
snR50snR50 CUZ1P53899 274 aa2.37□□□□□ -2.03
snR50snR50 KXD1P53158 218 aa2.36□□□□□ -2.03
snR50snR50 ALO1P54783 526 aaKnown RBP2.36□□□□□ -2.03
snR50snR50 YBL086CP38177 466 aa2.34□□□□□ -2.03
snR50snR50 AVT1P47082 602 aa2.34□□□□□ -2.03
snR50snR50 ADE12P80210 433 aaKnown RBP2.34□□□□□ -2.03
snR50snR50 SYT1Q06836 1226 aa2.33□□□□□ -2.04
snR50snR50 CEM1P39525 442 aa2.32□□□□□ -2.04
snR50snR50 KIP2P28743 706 aa2.31□□□□□ -2.04
snR50snR50 IXR1P33417 597 aa2.31□□□□□ -2.04
snR50snR50 RTF1P53064 558 aa2.31□□□□□ -2.04
snR50snR50 OMA1P36163 345 aa2.3□□□□□ -2.04
snR50snR50 IFH1P39520 1085 aa2.28□□□□□ -2.04
snR50snR50 YNR014WP53719 212 aa2.28□□□□□ -2.04
snR50snR50 YNL115CP53925 644 aa2.28□□□□□ -2.04
snR50snR50 AOS1Q06624 347 aa2.28□□□□□ -2.04
snR50snR50 SET1P38827 1080 aaKnown RBP2.27□□□□□ -2.05
snR50snR50 ELM1P32801 640 aa2.25□□□□□ -2.05
snR50snR50 BOI2P39969 1040 aa2.25□□□□□ -2.05
snR50snR50 VTC4P47075 721 aa2.25□□□□□ -2.05
snR50snR50 YDR461C-AQ2V2P7 80 aa2.25□□□□□ -2.05
snR50snR50 SIT4P20604 311 aa2.24□□□□□ -2.05
snR50snR50 TAT1P38085 619 aa2.24□□□□□ -2.05
snR50snR50 YPR097WQ06839 1073 aa2.24□□□□□ -2.05
snR50snR50 GPM1P00950 247 aaKnown RBP2.23□□□□□ -2.05
snR50snR50 DIT1P21623 536 aa2.23□□□□□ -2.05
snR50snR50 PRY1P47032 299 aa2.22□□□□□ -2.05
snR50snR50 REF2P42073 533 aaPredicted RBP2.21□□□□□ -2.06
snR50snR50 RPA14P50106 137 aa2.21□□□□□ -2.06
snR50snR50 KRE33P53914 1056 aaKnown RBP2.2□□□□□ -2.06
snR50snR50 YMR265CQ03508 461 aaKnown RBP2.2□□□□□ -2.06
snR50snR50 ALR1Q08269 859 aa2.2□□□□□ -2.06
snR50snR50 COX6P00427 148 aa2.19□□□□□ -2.06
snR50snR50 EMW1P42842 904 aaKnown RBP2.19□□□□□ -2.06
snR50snR50 VAC17P25591 423 aa2.18□□□□□ -2.06
snR50snR50 DAL1P32375 460 aa2.18□□□□□ -2.06
snR50snR50 UBP5P39944 805 aa2.18□□□□□ -2.06
snR50snR50 ITT1Q04638 464 aa2.18□□□□□ -2.06
snR50snR50 YCR015CP25616 317 aa2.17□□□□□ -2.06
snR50snR50 APP1P53933 587 aa2.17□□□□□ -2.06
snR50snR50 YDL206WQ12424 762 aa2.17□□□□□ -2.06
snR50snR50 NAF1P53919 492 aaKnown RBP2.16□□□□□ -2.06
snR50snR50 PGM1P33401 570 aaKnown RBP2.15□□□□□ -2.07
snR50snR50 CTH1P47976 325 aa2.15□□□□□ -2.07
snR50snR50 DFG5Q05031 458 aa2.15□□□□□ -2.07
snR50snR50 MET1P36150 593 aa2.13□□□□□ -2.07
snR50snR50 YKR073CP36153 106 aa2.13□□□□□ -2.07
snR50snR50 UBP15P50101 1230 aa2.13□□□□□ -2.07
snR50snR50 MAK21Q12176 1025 aaKnown RBP2.13□□□□□ -2.07
snR50snR50 CLB5P30283 435 aa2.12□□□□□ -2.07
snR50snR50 SLA1P32790 1244 aa2.12□□□□□ -2.07
snR50snR50 YPT53P36019 220 aa2.12□□□□□ -2.07
snR50snR50 TRP3P00937 484 aa2.11□□□□□ -2.07
snR50snR50 PDC5P16467 563 aaKnown RBP2.11□□□□□ -2.07
snR50snR50 RNQ1P25367 405 aa2.1□□□□□ -2.07
snR50snR50 PSE1P32337 1089 aaKnown RBP2.1□□□□□ -2.07
snR50snR50 KNS1P32350 737 aaPredicted RBP2.1□□□□□ -2.07
snR50snR50 MKS1P34072 584 aa2.1□□□□□ -2.07
snR50snR50 PUS6P53294 404 aa2.1□□□□□ -2.07
snR50snR50 TY1A-DR3Q12441 440 aa2.1□□□□□ -2.07
snR50snR50 STE6P12866 1290 aa2.09□□□□□ -2.07
snR50snR50 BUD9P53226 547 aa2.09□□□□□ -2.07
snR50snR50 NIS1P53939 407 aa2.09□□□□□ -2.07
snR50snR50 TAD3Q9URQ3 322 aa2.09□□□□□ -2.07
snR50snR50 SLY41P22215 453 aa2.08□□□□□ -2.08
snR50snR50 PUB1P32588 453 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
snR50snR50 YKL222CP35995 705 aa2.07□□□□□ -2.08
snR50snR50 BDS1Q08347 646 aa2.07□□□□□ -2.08
snR50snR50 TPS3P38426 1054 aaKnown RBP2.06□□□□□ -2.08
snR50snR50 TAF1P46677 1066 aa2.06□□□□□ -2.08
snR50snR50 TRM1P15565 570 aaKnown RBP2.05□□□□□ -2.08
snR50snR50 BUB1P41695 1021 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
snR50snR50 TBF1Q02457 562 aa2.05□□□□□ -2.08
snR50snR50 YPR148CQ06523 435 aa2.05□□□□□ -2.08
snR50snR50 MED7Q08278 222 aa2.05□□□□□ -2.08
snR50snR50 FPS1P23900 669 aa2.04□□□□□ -2.08
snR50snR50 FBP26P32604 452 aa2.04□□□□□ -2.08
snR50snR50 LIP5P32875 414 aa2.04□□□□□ -2.08
snR50snR50 SSN3P39073 555 aa2.03□□□□□ -2.08
snR50snR50 TY1A-DR2Q03964 440 aaKnown RBP2.03□□□□□ -2.08
snR50snR50 BRE4Q07660 1125 aa2.03□□□□□ -2.08
snR50snR50 ESC8Q08119 714 aa2.03□□□□□ -2.08
snR50snR50 AI3P03877 415 aa2.02□□□□□ -2.09
snR50snR50 TOS1P38288 455 aa2.02□□□□□ -2.09
snR50snR50 MSN5P52918 1224 aa2.01□□□□□ -2.09
snR50snR50 FPK1P53739 893 aa2.01□□□□□ -2.09
snR50snR50 MAG2Q06436 670 aaKnown RBP2.01□□□□□ -2.09
snR50snR50 YLR122CQ12312 125 aa2.01□□□□□ -2.09
snR50snR50 GAS5Q08193 484 aa1.99□□□□□ -2.09
snR50snR50 GIP4P39732 760 aa1.98□□□□□ -2.09
snR50snR50 SCJ1P25303 377 aa1.97□□□□□ -2.09
snR50snR50 SEG2P34250 1132 aa1.97□□□□□ -2.09
snR50snR50 KAE1P36132 386 aa1.97□□□□□ -2.09
snR50snR50 TEA1P47988 759 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms