RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	ESC2	Q06340	456 aa		5.75	□□□□□ -1.49
snR17b	snR17b	DIP2	Q12220	943 aa	Predicted RBP	5.75	□□□□□ -1.49
snR17b	snR17b	ROM2	P51862	1356 aa	Known RBP	5.75	□□□□□ -1.49
snR17b	snR17b	RAD50	P12753	1312 aa		5.74	□□□□□ -1.49
snR17b	snR17b	RPN12	P32496	274 aa		5.74	□□□□□ -1.49
snR17b	snR17b	IPL1	P38991	367 aa		5.74	□□□□□ -1.49
snR17b	snR17b	RAD26	P40352	1085 aa		5.74	□□□□□ -1.49
snR17b	snR17b	MLP1	Q02455	1875 aa	Known RBP	5.74	□□□□□ -1.49
snR17b	snR17b	SPT21	P35209	758 aa		5.73	□□□□□ -1.49
snR17b	snR17b	MIC60	P36112	540 aa		5.73	□□□□□ -1.49
snR17b	snR17b	BRN1	P38170	754 aa		5.73	□□□□□ -1.49
snR17b	snR17b	RPN1	P38764	993 aa	Known RBP	5.73	□□□□□ -1.49
snR17b	snR17b	RVS167	P39743	482 aa	Known RBP	5.73	□□□□□ -1.49
snR17b	snR17b	PSK1	P31374	1356 aa		5.72	□□□□□ -1.49
snR17b	snR17b	RFC1	P38630	861 aa	Known RBP	5.72	□□□□□ -1.49
snR17b	snR17b	HXT13	P39924	564 aa		5.72	□□□□□ -1.49
snR17b	snR17b	HST1	P53685	503 aa		5.72	□□□□□ -1.49
snR17b	snR17b	HOS3	Q02959	697 aa	Known RBP	5.72	□□□□□ -1.49
snR17b	snR17b	VPS20	Q04272	221 aa		5.72	□□□□□ -1.49
snR17b	snR17b	AUS1	Q08409	1394 aa		5.71	□□□□□ -1.5
snR17b	snR17b	BIK1	P11709	440 aa		5.71	□□□□□ -1.5
snR17b	snR17b	PDI1	P17967	522 aa	Known RBP	5.71	□□□□□ -1.5
snR17b	snR17b	YNG2	P38806	282 aa	Known RBP	5.71	□□□□□ -1.5
snR17b	snR17b	KRE33	P53914	1056 aa	Known RBP	5.71	□□□□□ -1.5
snR17b	snR17b	RCM1	P53972	490 aa		5.71	□□□□□ -1.5
snR17b	snR17b	HRQ1	Q05549	1077 aa		5.71	□□□□□ -1.5
snR17b	snR17b	PPH3	P32345	308 aa		5.7	□□□□□ -1.5
snR17b	snR17b	NMD2	P38798	1089 aa	Known RBP	5.7	□□□□□ -1.5
snR17b	snR17b	SMC3	P47037	1230 aa		5.7	□□□□□ -1.5
snR17b	snR17b	GYP7	P48365	746 aa		5.7	□□□□□ -1.5
snR17b	snR17b	SPO1	P53541	631 aa		5.7	□□□□□ -1.5
snR17b	snR17b	HXT17	P53631	564 aa		5.7	□□□□□ -1.5
snR17b	snR17b	CSI1	Q04368	295 aa		5.7	□□□□□ -1.5
snR17b	snR17b	KEX1	P09620	729 aa		5.69	□□□□□ -1.5
snR17b	snR17b	CYC8	P14922	966 aa		5.69	□□□□□ -1.5
snR17b	snR17b	GRX4	P32642	244 aa		5.69	□□□□□ -1.5
snR17b	snR17b	TCD1	P38756	429 aa		5.69	□□□□□ -1.5
snR17b	snR17b	RSM25	P40496	264 aa		5.69	□□□□□ -1.5
snR17b	snR17b	STU2	P46675	888 aa		5.69	□□□□□ -1.5
snR17b	snR17b	RTF1	P53064	558 aa		5.69	□□□□□ -1.5
snR17b	snR17b	URN1	Q06525	465 aa	Known RBP	5.69	□□□□□ -1.5
snR17b	snR17b	APC11	Q12157	165 aa		5.69	□□□□□ -1.5
snR17b	snR17b	RNR2	P09938	399 aa	Known RBP	5.68	□□□□□ -1.5
snR17b	snR17b	LTV1	P34078	463 aa		5.68	□□□□□ -1.5
snR17b	snR17b	DID4	P36108	232 aa		5.68	□□□□□ -1.5
snR17b	snR17b	HYR1	P40581	163 aa	Known RBP	5.68	□□□□□ -1.5
snR17b	snR17b	CWH41	P53008	833 aa		5.68	□□□□□ -1.5
snR17b	snR17b	DSD1	P53095	428 aa		5.68	□□□□□ -1.5
snR17b	snR17b	LEU2	P04173	364 aa	Predicted RBP	5.67	□□□□□ -1.5
snR17b	snR17b	TRL1	P09880	827 aa	Known RBP	5.67	□□□□□ -1.5
snR17b	snR17b	KRI1	P42846	591 aa	Known RBP	5.67	□□□□□ -1.5
snR17b	snR17b	SRT1	Q03175	343 aa		5.67	□□□□□ -1.5
snR17b	snR17b	SFI1	Q12369	946 aa		5.67	□□□□□ -1.5
snR17b	snR17b	CLB5	P30283	435 aa		5.66	□□□□□ -1.5
snR17b	snR17b	YBR287W	P38355	427 aa		5.66	□□□□□ -1.5
snR17b	snR17b	CIN4	P39110	191 aa		5.66	□□□□□ -1.5
snR17b	snR17b	CEP3	P40969	608 aa		5.66	□□□□□ -1.5
snR17b	snR17b	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
snR17b	snR17b	TIM50	Q02776	476 aa		5.66	□□□□□ -1.5
snR17b	snR17b	NOP53	Q12080	455 aa	Known RBP	5.66	□□□□□ -1.5
snR17b	snR17b	RPO41	P13433	1351 aa	Known RBP	5.66	□□□□□ -1.5
snR17b	snR17b	VAS1	P07806	1104 aa	Known RBP	5.65	□□□□□ -1.5
snR17b	snR17b	MFT1	P33441	392 aa	Known RBP	5.65	□□□□□ -1.5
snR17b	snR17b	MPE1	P35728	441 aa	Known RBP	5.65	□□□□□ -1.5
snR17b	snR17b	MRPL10	P36520	322 aa		5.65	□□□□□ -1.5
snR17b	snR17b	AKL1	P38080	1108 aa	Known RBP	5.65	□□□□□ -1.5
snR17b	snR17b	PBY1	P38254	753 aa		5.65	□□□□□ -1.5
snR17b	snR17b	ZDS1	P50111	915 aa	Known RBP	5.65	□□□□□ -1.5
snR17b	snR17b	YNL050C	P53952	270 aa		5.65	□□□□□ -1.5
snR17b	snR17b	SSL2	Q00578	843 aa		5.65	□□□□□ -1.5
snR17b	snR17b	VPS60	Q03390	229 aa		5.65	□□□□□ -1.5
snR17b	snR17b	PEX19	Q07418	342 aa		5.65	□□□□□ -1.5
snR17b	snR17b	LYS2	P07702	1392 aa		5.65	□□□□□ -1.51
snR17b	snR17b	DNF3	Q12674	1656 aa		5.64	□□□□□ -1.51
snR17b	snR17b	RPS19A	P07280	144 aa	Known RBP	5.64	□□□□□ -1.51
snR17b	snR17b	RPS19B	P07281	144 aa	Predicted RBP	5.64	□□□□□ -1.51
snR17b	snR17b	RNA1	P11745	407 aa	Known RBP	5.64	□□□□□ -1.51
snR17b	snR17b	MNR2	P35724	969 aa		5.64	□□□□□ -1.51
snR17b	snR17b	MAM1	P40065	302 aa		5.64	□□□□□ -1.51
snR17b	snR17b	MTR4	P47047	1073 aa	Known RBP	5.64	□□□□□ -1.51
snR17b	snR17b	MRX12	P47084	519 aa		5.64	□□□□□ -1.51
snR17b	snR17b	UTP13	Q05946	817 aa	Known RBP	5.64	□□□□□ -1.51
snR17b	snR17b	GAS4	Q08271	471 aa		5.64	□□□□□ -1.51
snR17b	snR17b	NOP14	Q99207	810 aa	Known RBP	5.64	□□□□□ -1.51
snR17b	snR17b	CDC16	P09798	840 aa		5.63	□□□□□ -1.51
snR17b	snR17b	TAF13	P11747	167 aa		5.63	□□□□□ -1.51
snR17b	snR17b	SPB4	P25808	606 aa	Predicted RBP	5.63	□□□□□ -1.51
snR17b	snR17b	NPR3	P38742	1146 aa		5.63	□□□□□ -1.51
snR17b	snR17b	SES1	P07284	462 aa	Known RBP	5.62	□□□□□ -1.51
snR17b	snR17b	DEP1	P31385	405 aa		5.62	□□□□□ -1.51
snR17b	snR17b	CCT5	P40413	562 aa	Known RBP	5.62	□□□□□ -1.51
snR17b	snR17b	DPS1	P04802	557 aa	Known RBP	5.61	□□□□□ -1.51
snR17b	snR17b	RPS24A	P0CX31	135 aa	Known RBP	5.61	□□□□□ -1.51
snR17b	snR17b	RPS24B	P0CX32	135 aa	Known RBP	5.61	□□□□□ -1.51
snR17b	snR17b	CLB1	P24868	471 aa		5.61	□□□□□ -1.51
snR17b	snR17b	RAD24	P32641	659 aa		5.61	□□□□□ -1.51
snR17b	snR17b	ELM1	P32801	640 aa		5.61	□□□□□ -1.51
snR17b	snR17b	NTH2	P35172	780 aa		5.61	□□□□□ -1.51
snR17b	snR17b	BDP1	P46678	594 aa		5.61	□□□□□ -1.51
snR17b	snR17b	CWC22	P53333	577 aa	Known RBP	5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 100.7 ms