RNA–Protein interactions for RNA: YPL180W

TCO89, Transcript of Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p), yeast

Gene TCO89, Length 2,400 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCO89	YPL180W	YHR218W	P38899	603 aa		4.62	□□□□□ -1.67
TCO89	YPL180W	DSN1	P40568	576 aa		4.62	□□□□□ -1.67
TCO89	YPL180W	YOL057W	Q08225	711 aa		4.62	□□□□□ -1.67
TCO89	YPL180W	YOR389W	Q08912	624 aa		4.62	□□□□□ -1.67
TCO89	YPL180W	RUD3	Q12234	484 aa	Known RBP	4.62	□□□□□ -1.67
TCO89	YPL180W	DCD1	P06773	312 aa		4.62	□□□□□ -1.67
TCO89	YPL180W	KEX1	P09620	729 aa		4.62	□□□□□ -1.67
TCO89	YPL180W	TIM11	P81449	96 aa	Predicted RBP	4.62	□□□□□ -1.67
TCO89	YPL180W	NKP1	Q12493	238 aa		4.62	□□□□□ -1.67
TCO89	YPL180W	CDC31	P06704	161 aa	Known RBP	4.61	□□□□□ -1.67
TCO89	YPL180W	KIN1	P13185	1064 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	BRF1	P29056	596 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	ALD2	P47771	506 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	OCA1	P50946	238 aa	Predicted RBP	4.61	□□□□□ -1.67
TCO89	YPL180W	YNL247W	P53852	767 aa	Known RBP	4.61	□□□□□ -1.67
TCO89	YPL180W	SRP1	Q02821	542 aa	Known RBP	4.61	□□□□□ -1.67
TCO89	YPL180W	ERV41	Q04651	352 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	SUB2	Q07478	446 aa	Known RBP	4.61	□□□□□ -1.67
TCO89	YPL180W	MPH3	P0CE00	602 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	TSR4	P25040	408 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	SWI3	P32591	825 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	MET1	P36150	593 aa		4.61	□□□□□ -1.67
TCO89	YPL180W	RRP9	Q06506	573 aa	Known RBP	4.61	□□□□□ -1.67
TCO89	YPL180W	CYB2	P00175	591 aa		4.6	□□□□□ -1.67
TCO89	YPL180W	CST6	P40535	587 aa		4.6	□□□□□ -1.67
TCO89	YPL180W	BMS1	Q08965	1183 aa	Known RBP	4.6	□□□□□ -1.67
TCO89	YPL180W	LSP1	Q12230	341 aa	Known RBP	4.6	□□□□□ -1.67
TCO89	YPL180W	MAK16	P10962	306 aa	Predicted RBP	4.6	□□□□□ -1.67
TCO89	YPL180W	KAR1	P11927	433 aa		4.6	□□□□□ -1.67
TCO89	YPL180W	CLB5	P30283	435 aa		4.6	□□□□□ -1.67
TCO89	YPL180W	ARC19	P33204	171 aa	Known RBP	4.6	□□□□□ -1.67
TCO89	YPL180W	GYP7	P48365	746 aa		4.6	□□□□□ -1.67
TCO89	YPL180W	KEL2	P50090	882 aa		4.6	□□□□□ -1.67
TCO89	YPL180W	SVL3	Q03088	825 aa	Known RBP	4.6	□□□□□ -1.67
TCO89	YPL180W	NOP14	Q99207	810 aa	Known RBP	4.6	□□□□□ -1.67
TCO89	YPL180W	HO	P09932	586 aa		4.59	□□□□□ -1.67
TCO89	YPL180W	PHO87	P25360	923 aa		4.59	□□□□□ -1.67
TCO89	YPL180W	GCD6	P32501	712 aa	Known RBP	4.59	□□□□□ -1.67
TCO89	YPL180W	NPL4	P33755	580 aa		4.59	□□□□□ -1.67
TCO89	YPL180W	LAM1	P38851	1228 aa		4.59	□□□□□ -1.67
TCO89	YPL180W	CCM1	P48237	864 aa	Predicted RBP	4.59	□□□□□ -1.67
TCO89	YPL180W	HGH1	P48362	394 aa	Known RBP	4.59	□□□□□ -1.67
TCO89	YPL180W	COG8	Q04632	607 aa		4.59	□□□□□ -1.67
TCO89	YPL180W	PHM6	Q05637	104 aa		4.59	□□□□□ -1.67
TCO89	YPL180W	YGL015C	P33199	130 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	RPC37	P36121	282 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	RNH70	P53331	553 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	DBP10	Q12389	995 aa	Known RBP	4.58	□□□□□ -1.68
TCO89	YPL180W	APC2	Q12440	853 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	STH1	P32597	1359 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	SSB1	P11484	613 aa	Known RBP	4.58	□□□□□ -1.68
TCO89	YPL180W	RPN12	P32496	274 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	RIM101	P33400	625 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	KDX1	P36005	433 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	SNF7	P39929	240 aa	Known RBP	4.58	□□□□□ -1.68
TCO89	YPL180W	SSB2	P40150	613 aa	Known RBP	4.58	□□□□□ -1.68
TCO89	YPL180W	TFG1	P41895	735 aa	Predicted RBP	4.58	□□□□□ -1.68
TCO89	YPL180W	JJJ1	P53863	590 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	PUF6	Q04373	656 aa	Known RBP	4.58	□□□□□ -1.68
TCO89	YPL180W	NSE3	Q05541	303 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	PCL8	Q08966	492 aa		4.58	□□□□□ -1.68
TCO89	YPL180W	YEF3	P16521	1044 aa	Known RBP	4.57	□□□□□ -1.68
TCO89	YPL180W	HEM3	P28789	327 aa		4.57	□□□□□ -1.68
TCO89	YPL180W	PRS1	P32895	427 aa	Known RBP	4.57	□□□□□ -1.68
TCO89	YPL180W	ARR1	Q06596	294 aa		4.57	□□□□□ -1.68
TCO89	YPL180W	ESL2	P36168	1195 aa		4.57	□□□□□ -1.68
TCO89	YPL180W	BDP1	P46678	594 aa		4.57	□□□□□ -1.68
TCO89	YPL180W	SEC23	P15303	768 aa	Known RBP	4.56	□□□□□ -1.68
TCO89	YPL180W	SRP54	P20424	541 aa	Known RBP	4.56	□□□□□ -1.68
TCO89	YPL180W	UGA3	P26370	528 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	RTG2	P32608	588 aa	Known RBP	4.56	□□□□□ -1.68
TCO89	YPL180W	SAS3	P34218	831 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	DSF2	P38213	736 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	MED8	P38304	223 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	NNF1	P47149	201 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	REX2	P54964	269 aa	Known RBP	4.56	□□□□□ -1.68
TCO89	YPL180W	VTI1	Q04338	217 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	CLP1	Q08685	445 aa	Predicted RBP	4.56	□□□□□ -1.68
TCO89	YPL180W	TFC3	P34111	1160 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	RKM3	P38222	552 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	STM1	P39015	273 aa	Known RBP	4.56	□□□□□ -1.68
TCO89	YPL180W	HUL5	P53119	910 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	SPO71	Q03868	1245 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	NDL1	Q06568	189 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	TFC8	Q12308	588 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	TCB1	Q12466	1186 aa		4.56	□□□□□ -1.68
TCO89	YPL180W	NIP100	P33420	868 aa		4.55	□□□□□ -1.68
TCO89	YPL180W	DSL1	P53847	754 aa		4.55	□□□□□ -1.68
TCO89	YPL180W	SEN54	Q02825	467 aa	Predicted RBP	4.55	□□□□□ -1.68
TCO89	YPL180W	TRS33	Q99394	268 aa		4.55	□□□□□ -1.68
TCO89	YPL180W	SWI6	P09959	803 aa		4.55	□□□□□ -1.68
TCO89	YPL180W	SIT4	P20604	311 aa		4.55	□□□□□ -1.68
TCO89	YPL180W	RTT106	P40161	455 aa		4.55	□□□□□ -1.68
TCO89	YPL180W	HST2	P53686	357 aa		4.55	□□□□□ -1.68
TCO89	YPL180W	SMD2	Q06217	110 aa	Known RBP	4.55	□□□□□ -1.68
TCO89	YPL180W	UTP4	Q06679	776 aa	Known RBP	4.55	□□□□□ -1.68
TCO89	YPL180W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
TCO89	YPL180W	THR4	P16120	514 aa	Known RBP	4.54	□□□□□ -1.68
TCO89	YPL180W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
TCO89	YPL180W	ANP1	P32629	500 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms