RNA–Protein interactions for RNA: YPL040C

ISM1, Transcript of Mitochondrial isoleucyl-tRNA synthetase, yeast

Gene ISM1, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISM1	YPL040C	KTR7	P40504	517 aa		4.61	□□□□□ -1.67
ISM1	YPL040C	ALD6	P54115	500 aa	Known RBP	4.61	□□□□□ -1.67
ISM1	YPL040C	PPM2	Q08282	695 aa		4.61	□□□□□ -1.67
ISM1	YPL040C	SSB1	P11484	613 aa	Known RBP	4.61	□□□□□ -1.67
ISM1	YPL040C	SLX5	P32828	619 aa	Known RBP	4.61	□□□□□ -1.67
ISM1	YPL040C	SSB2	P40150	613 aa	Known RBP	4.61	□□□□□ -1.67
ISM1	YPL040C	QDR1	P40475	563 aa		4.61	□□□□□ -1.67
ISM1	YPL040C	ACS2	P52910	683 aa	Known RBP	4.61	□□□□□ -1.67
ISM1	YPL040C	PHO87	P25360	923 aa		4.6	□□□□□ -1.67
ISM1	YPL040C	PPG1	P32838	368 aa		4.6	□□□□□ -1.67
ISM1	YPL040C	SLI15	P38283	698 aa		4.6	□□□□□ -1.67
ISM1	YPL040C	TPM2	P40414	161 aa		4.6	□□□□□ -1.67
ISM1	YPL040C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
ISM1	YPL040C	BDF2	Q07442	638 aa		4.6	□□□□□ -1.67
ISM1	YPL040C	PHO4	P07270	312 aa	Known RBP	4.59	□□□□□ -1.67
ISM1	YPL040C	ISF1	P32488	338 aa		4.59	□□□□□ -1.67
ISM1	YPL040C	MGE1	P38523	228 aa		4.59	□□□□□ -1.67
ISM1	YPL040C	TFG1	P41895	735 aa	Predicted RBP	4.59	□□□□□ -1.67
ISM1	YPL040C	SPR28	Q04921	423 aa		4.59	□□□□□ -1.67
ISM1	YPL040C	PIB1	Q06651	286 aa		4.59	□□□□□ -1.67
ISM1	YPL040C	YPR084W	Q06821	456 aa		4.59	□□□□□ -1.67
ISM1	YPL040C	SRP40	P32583	406 aa	Predicted RBP	4.59	□□□□□ -1.67
ISM1	YPL040C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
ISM1	YPL040C	YJL049W	P47048	450 aa		4.59	□□□□□ -1.67
ISM1	YPL040C	MTO1	P53070	669 aa		4.59	□□□□□ -1.67
ISM1	YPL040C	SRS2	P12954	1174 aa		4.59	□□□□□ -1.68
ISM1	YPL040C	TRM1	P15565	570 aa	Known RBP	4.59	□□□□□ -1.68
ISM1	YPL040C	SUV3	P32580	737 aa		4.59	□□□□□ -1.68
ISM1	YPL040C	ZDS1	P50111	915 aa	Known RBP	4.58	□□□□□ -1.68
ISM1	YPL040C	TFB4	Q12004	338 aa		4.58	□□□□□ -1.68
ISM1	YPL040C	LSO1	Q3E827	93 aa		4.58	□□□□□ -1.68
ISM1	YPL040C	MIP1	P15801	1254 aa		4.58	□□□□□ -1.68
ISM1	YPL040C	SLY41	P22215	453 aa		4.58	□□□□□ -1.68
ISM1	YPL040C	YKL091C	P33324	310 aa	Known RBP	4.58	□□□□□ -1.68
ISM1	YPL040C	EMP47	P43555	445 aa		4.58	□□□□□ -1.68
ISM1	YPL040C	MDG1	P53885	366 aa		4.58	□□□□□ -1.68
ISM1	YPL040C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
ISM1	YPL040C	THI12	P42883	340 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	THI5	P43534	340 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	THI11	P47183	340 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	THI13	Q07748	340 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	YOL057W	Q08225	711 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
ISM1	YPL040C	BOI1	P38041	980 aa	Known RBP	4.57	□□□□□ -1.68
ISM1	YPL040C	UBP12	P39538	1254 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	YJR142W	P47173	342 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	FRA1	Q07825	749 aa		4.57	□□□□□ -1.68
ISM1	YPL040C	MCM2	P29469	868 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	KTR2	P33550	425 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	DAK2	P43550	591 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	YNL115C	P53925	644 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	HAP4	P14064	554 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
ISM1	YPL040C	RMD1	Q03441	430 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	YOL036W	Q08206	761 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	GLO3	P38682	493 aa	Known RBP	4.56	□□□□□ -1.68
ISM1	YPL040C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
ISM1	YPL040C	YAP5	P40574	245 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	CDC73	Q06697	393 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	GYP5	Q12344	894 aa		4.56	□□□□□ -1.68
ISM1	YPL040C	YGL081W	P53156	320 aa		4.55	□□□□□ -1.68
ISM1	YPL040C	SVL3	Q03088	825 aa	Known RBP	4.55	□□□□□ -1.68
ISM1	YPL040C	POB3	Q04636	552 aa	Known RBP	4.55	□□□□□ -1.68
ISM1	YPL040C	FUR4	P05316	633 aa	Known RBP	4.55	□□□□□ -1.68
ISM1	YPL040C	UTP13	Q05946	817 aa	Known RBP	4.55	□□□□□ -1.68
ISM1	YPL040C	TOS4	Q06266	489 aa		4.55	□□□□□ -1.68
ISM1	YPL040C	TRS120	Q04183	1289 aa		4.54	□□□□□ -1.68
ISM1	YPL040C	APC11	Q12157	165 aa		4.54	□□□□□ -1.68
ISM1	YPL040C	RPT1	P33299	467 aa	Known RBP	4.54	□□□□□ -1.68
ISM1	YPL040C	YHR020W	P38708	688 aa	Known RBP	4.54	□□□□□ -1.68
ISM1	YPL040C	PUS6	P53294	404 aa		4.54	□□□□□ -1.68
ISM1	YPL040C	ESF1	Q06344	628 aa	Known RBP	4.54	□□□□□ -1.68
ISM1	YPL040C	PUN1	Q06991	263 aa		4.54	□□□□□ -1.68
ISM1	YPL040C	GAS4	Q08271	471 aa		4.54	□□□□□ -1.68
ISM1	YPL040C	TSC13	Q99190	310 aa		4.54	□□□□□ -1.68
ISM1	YPL040C	DAN4	P47179	1161 aa		4.53	□□□□□ -1.68
ISM1	YPL040C	TUM1	Q08686	304 aa	Known RBP	4.53	□□□□□ -1.68
ISM1	YPL040C	MNN1	P39106	762 aa		4.53	□□□□□ -1.68
ISM1	YPL040C	TUB4	P53378	473 aa		4.53	□□□□□ -1.68
ISM1	YPL040C	AGE1	Q04412	482 aa		4.53	□□□□□ -1.68
ISM1	YPL040C	ENV9	Q08651	330 aa		4.53	□□□□□ -1.68
ISM1	YPL040C	RTT106	P40161	455 aa		4.52	□□□□□ -1.69
ISM1	YPL040C	NOP2	P40991	618 aa	Known RBP	4.52	□□□□□ -1.69
ISM1	YPL040C	ERF2	Q06551	359 aa		4.52	□□□□□ -1.69
ISM1	YPL040C	CYC8	P14922	966 aa		4.52	□□□□□ -1.69
ISM1	YPL040C	PAF1	P38351	445 aa		4.52	□□□□□ -1.69
ISM1	YPL040C	UBP1	P25037	809 aa		4.51	□□□□□ -1.69
ISM1	YPL040C	BRE1	Q07457	700 aa	Known RBP	4.51	□□□□□ -1.69
ISM1	YPL040C	CDC53	Q12018	815 aa	Known RBP	4.51	□□□□□ -1.69
ISM1	YPL040C	VMA4	P22203	233 aa	Known RBP	4.51	□□□□□ -1.69
ISM1	YPL040C	GRX1	P25373	110 aa	Known RBP	4.51	□□□□□ -1.69
ISM1	YPL040C	BOI2	P39969	1040 aa		4.51	□□□□□ -1.69
ISM1	YPL040C	MNR2	P35724	969 aa		4.51	□□□□□ -1.69
ISM1	YPL040C	FIG4	P42837	879 aa		4.51	□□□□□ -1.69
ISM1	YPL040C	YGR122W	P53272	402 aa		4.51	□□□□□ -1.69
ISM1	YPL040C	YDL121C	Q07541	149 aa		4.51	□□□□□ -1.69
ISM1	YPL040C	CLN2	P20438	545 aa		4.5	□□□□□ -1.69
ISM1	YPL040C	HAL5	P38970	855 aa	Known RBP	4.5	□□□□□ -1.69
ISM1	YPL040C	MST1	P07236	462 aa		4.5	□□□□□ -1.69
ISM1	YPL040C	BUD31	P25337	157 aa	Predicted RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms