RNA–Protein interactions for RNA: YOR357C

SNX3, Transcript of Sorting nexin for late-Golgi enzymes, yeastyeast

Gene SNX3, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX3YOR357C FAP1P53971 965 aa10.44□□□□□ -0.74
SNX3YOR357C ECM16Q04217 1267 aaKnown RBP10.44□□□□□ -0.74
SNX3YOR357C SLM3Q12093 417 aa10.44□□□□□ -0.74
SNX3YOR357C YPP1P46951 817 aa10.43□□□□□ -0.74
SNX3YOR357C BMS1Q08965 1183 aaKnown RBP10.43□□□□□ -0.74
SNX3YOR357C YBR287WP38355 427 aa10.41□□□□□ -0.74
SNX3YOR357C PRP45P28004 379 aaPredicted RBP10.4□□□□□ -0.74
SNX3YOR357C CSI1Q04368 295 aa10.4□□□□□ -0.74
SNX3YOR357C NSE3Q05541 303 aa10.4□□□□□ -0.74
SNX3YOR357C COQ4O13525 335 aa10.39□□□□□ -0.75
SNX3YOR357C CLC1P17891 233 aa10.39□□□□□ -0.75
SNX3YOR357C UGA3P26370 528 aa10.39□□□□□ -0.75
SNX3YOR357C YNG2P38806 282 aaKnown RBP10.39□□□□□ -0.75
SNX3YOR357C ISW2Q08773 1120 aa10.39□□□□□ -0.75
SNX3YOR357C RPS19AP07280 144 aaKnown RBP10.38□□□□□ -0.75
SNX3YOR357C RPS19BP07281 144 aaPredicted RBP10.38□□□□□ -0.75
SNX3YOR357C PCT1P13259 424 aa10.38□□□□□ -0.75
SNX3YOR357C MSB3P48566 633 aaPredicted RBP10.38□□□□□ -0.75
SNX3YOR357C LYS2P07702 1392 aa10.38□□□□□ -0.75
SNX3YOR357C ILV3P39522 585 aaKnown RBP10.37□□□□□ -0.75
SNX3YOR357C KCC4P25389 1037 aa10.36□□□□□ -0.75
SNX3YOR357C SPO1P53541 631 aa10.36□□□□□ -0.75
SNX3YOR357C RCR1P38212 213 aa10.35□□□□□ -0.75
SNX3YOR357C SNF7P39929 240 aaKnown RBP10.35□□□□□ -0.75
SNX3YOR357C PTP3P40048 928 aa10.35□□□□□ -0.75
SNX3YOR357C XKS1P42826 600 aa10.35□□□□□ -0.75
SNX3YOR357C TCB1Q12466 1186 aa10.35□□□□□ -0.75
SNX3YOR357C YOL057WQ08225 711 aa10.34□□□□□ -0.75
SNX3YOR357C NOP8Q08287 484 aaPredicted RBP10.34□□□□□ -0.75
SNX3YOR357C NKP2Q06162 153 aa10.33□□□□□ -0.76
SNX3YOR357C NUP145P49687 1317 aa10.33□□□□□ -0.76
SNX3YOR357C NMD2P38798 1089 aaKnown RBP10.32□□□□□ -0.76
SNX3YOR357C RAD50P12753 1312 aa10.32□□□□□ -0.76
SNX3YOR357C VPS24P36095 224 aaKnown RBP10.31□□□□□ -0.76
SNX3YOR357C RFC1P38630 861 aaKnown RBP10.31□□□□□ -0.76
SNX3YOR357C RAD4P14736 754 aa10.3□□□□□ -0.76
SNX3YOR357C RAD24P32641 659 aa10.3□□□□□ -0.76
SNX3YOR357C INP54Q08227 384 aaKnown RBP10.3□□□□□ -0.76
SNX3YOR357C RSF2P46974 1380 aa10.29□□□□□ -0.76
SNX3YOR357C MRP7P12687 371 aa10.29□□□□□ -0.76
SNX3YOR357C ROX1P25042 368 aa10.29□□□□□ -0.76
SNX3YOR357C GCD7P32502 381 aaPredicted RBP10.29□□□□□ -0.76
SNX3YOR357C HGH1P48362 394 aaKnown RBP10.29□□□□□ -0.76
SNX3YOR357C YGR122WP53272 402 aa10.28□□□□□ -0.76
SNX3YOR357C YDR306CQ06640 478 aa10.28□□□□□ -0.76
SNX3YOR357C LSP1Q12230 341 aaKnown RBP10.28□□□□□ -0.76
SNX3YOR357C RLF2Q12495 606 aa10.28□□□□□ -0.76
SNX3YOR357C YRF1-3P0CX14 1859 aa10.27□□□□□ -0.76
SNX3YOR357C YRF1-7P0CX15 1859 aa10.27□□□□□ -0.76
SNX3YOR357C YRF1-6P53819 1859 aa10.27□□□□□ -0.76
SNX3YOR357C GCR2Q01722 534 aa10.27□□□□□ -0.77
SNX3YOR357C CDC16P09798 840 aa10.26□□□□□ -0.77
SNX3YOR357C BOI2P39969 1040 aa10.26□□□□□ -0.77
SNX3YOR357C DLD1P32891 587 aa10.25□□□□□ -0.77
SNX3YOR357C DJP1P40564 432 aa10.25□□□□□ -0.77
SNX3YOR357C ITC1P53125 1264 aa10.24□□□□□ -0.77
SNX3YOR357C DNM1P54861 757 aa10.24□□□□□ -0.77
SNX3YOR357C MEC3Q02574 474 aa10.24□□□□□ -0.77
SNX3YOR357C ALE1Q08548 619 aa10.24□□□□□ -0.77
SNX3YOR357C ROM2P51862 1356 aaKnown RBP10.24□□□□□ -0.77
SNX3YOR357C BRN1P38170 754 aa10.23□□□□□ -0.77
SNX3YOR357C SRS2P12954 1174 aa10.22□□□□□ -0.77
SNX3YOR357C OSM1P21375 501 aaKnown RBP10.22□□□□□ -0.77
SNX3YOR357C MSP1P28737 362 aa10.22□□□□□ -0.77
SNX3YOR357C SWC3P31376 625 aa10.22□□□□□ -0.77
SNX3YOR357C RPG1P38249 964 aaKnown RBP10.22□□□□□ -0.77
SNX3YOR357C CST6P40535 587 aa10.22□□□□□ -0.77
SNX3YOR357C YJR008WP47085 338 aa10.21□□□□□ -0.77
SNX3YOR357C ZDS2P54786 942 aa10.21□□□□□ -0.77
SNX3YOR357C YPR148CQ06523 435 aa10.21□□□□□ -0.77
SNX3YOR357C PRI1P10363 409 aa10.2□□□□□ -0.78
SNX3YOR357C NUP133P36161 1157 aa10.2□□□□□ -0.78
SNX3YOR357C ADE16P54113 591 aaKnown RBP10.2□□□□□ -0.78
SNX3YOR357C ENT1Q12518 454 aa10.2□□□□□ -0.78
SNX3YOR357C VAS1P07806 1104 aaKnown RBP10.19□□□□□ -0.78
SNX3YOR357C IES2P40154 320 aa10.19□□□□□ -0.78
SNX3YOR357C BDP1P46678 594 aa10.19□□□□□ -0.78
SNX3YOR357C SWI1P09547 1314 aa10.18□□□□□ -0.78
SNX3YOR357C REB1P21538 810 aa10.18□□□□□ -0.78
SNX3YOR357C HXT13P39924 564 aa10.18□□□□□ -0.78
SNX3YOR357C MIF2P35201 549 aa10.17□□□□□ -0.78
SNX3YOR357C SLN1P39928 1220 aaPredicted RBP10.17□□□□□ -0.78
SNX3YOR357C YBP2P53169 641 aa10.17□□□□□ -0.78
SNX3YOR357C RMT2Q03305 412 aa10.17□□□□□ -0.78
SNX3YOR357C ATG13Q06628 738 aa10.17□□□□□ -0.78
SNX3YOR357C YKL133CP36066 463 aa10.16□□□□□ -0.78
SNX3YOR357C ARL1P38116 183 aaKnown RBP10.16□□□□□ -0.78
SNX3YOR357C TEA1P47988 759 aa10.16□□□□□ -0.78
SNX3YOR357C HXT17P53631 564 aa10.16□□□□□ -0.78
SNX3YOR357C NCB2Q92317 146 aa10.16□□□□□ -0.78
SNX3YOR357C DUR1,2P32528 1835 aaKnown RBP10.16□□□□□ -0.78
SNX3YOR357C UBP12P39538 1254 aa10.15□□□□□ -0.78
SNX3YOR357C LPD1P09624 499 aaKnown RBP10.14□□□□□ -0.79
SNX3YOR357C RNR2P09938 399 aaKnown RBP10.14□□□□□ -0.79
SNX3YOR357C SSF1P38789 453 aaPredicted RBP10.14□□□□□ -0.79
SNX3YOR357C FRK1Q03002 865 aaPredicted RBP10.14□□□□□ -0.79
SNX3YOR357C VPS64Q03944 604 aa10.14□□□□□ -0.79
SNX3YOR357C HAP5Q02516 242 aa10.13□□□□□ -0.79
SNX3YOR357C COG8Q04632 607 aa10.13□□□□□ -0.79
SNX3YOR357C ENV9Q08651 330 aa10.13□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms