RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YDR344CQ05510 147 aa3.51□□□□□ -1.85
DNL4YOR005C WHI5Q12416 295 aa3.51□□□□□ -1.85
DNL4YOR005C TCB3Q03640 1545 aaKnown RBP3.51□□□□□ -1.85
DNL4YOR005C TOP1P04786 769 aa3.5□□□□□ -1.85
DNL4YOR005C RTF1P53064 558 aa3.5□□□□□ -1.85
DNL4YOR005C CDC73Q06697 393 aa3.5□□□□□ -1.85
DNL4YOR005C ALD4P46367 519 aaKnown RBP3.5□□□□□ -1.85
DNL4YOR005C YNL115CP53925 644 aa3.5□□□□□ -1.85
DNL4YOR005C HTA1P04911 132 aaKnown RBP3.49□□□□□ -1.85
DNL4YOR005C HTA2P04912 132 aa3.49□□□□□ -1.85
DNL4YOR005C GRS1P38088 690 aaKnown RBP3.49□□□□□ -1.85
DNL4YOR005C SAP30P38429 201 aa3.49□□□□□ -1.85
DNL4YOR005C PUF6Q04373 656 aaKnown RBP3.49□□□□□ -1.85
DNL4YOR005C STB3Q12427 513 aa3.49□□□□□ -1.85
DNL4YOR005C TRM1P15565 570 aaKnown RBP3.49□□□□□ -1.85
DNL4YOR005C SEC8P32855 1065 aa3.49□□□□□ -1.85
DNL4YOR005C NMD2P38798 1089 aaKnown RBP3.49□□□□□ -1.85
DNL4YOR005C YAF9P53930 226 aa3.49□□□□□ -1.85
DNL4YOR005C JIP4Q03361 876 aa3.49□□□□□ -1.85
DNL4YOR005C TUM1Q08686 304 aaKnown RBP3.49□□□□□ -1.85
DNL4YOR005C ATG1P53104 897 aa3.48□□□□□ -1.85
DNL4YOR005C CST6P40535 587 aa3.48□□□□□ -1.85
DNL4YOR005C YJR107WP47145 328 aa3.48□□□□□ -1.85
DNL4YOR005C OYE2Q03558 400 aaKnown RBP3.48□□□□□ -1.85
DNL4YOR005C MAG2Q06436 670 aaKnown RBP3.48□□□□□ -1.85
DNL4YOR005C MET5P47169 1442 aa3.48□□□□□ -1.85
DNL4YOR005C PEX21P50091 288 aa3.48□□□□□ -1.85
DNL4YOR005C PUS6P53294 404 aa3.48□□□□□ -1.85
DNL4YOR005C PHO87P25360 923 aa3.47□□□□□ -1.85
DNL4YOR005C ISF1P32488 338 aa3.47□□□□□ -1.85
DNL4YOR005C BOL3P39724 118 aa3.47□□□□□ -1.85
DNL4YOR005C ENV9Q08651 330 aa3.47□□□□□ -1.85
DNL4YOR005C EMP47P43555 445 aa3.47□□□□□ -1.85
DNL4YOR005C PNP1Q05788 311 aa3.47□□□□□ -1.85
DNL4YOR005C YDL129WQ07555 291 aa3.47□□□□□ -1.85
DNL4YOR005C ACF4P47129 309 aa3.46□□□□□ -1.86
DNL4YOR005C NUT2Q06213 157 aa3.46□□□□□ -1.86
DNL4YOR005C ROM1P53046 1155 aa3.46□□□□□ -1.86
DNL4YOR005C YOL098CQ12496 1037 aa3.46□□□□□ -1.86
DNL4YOR005C HAP4P14064 554 aa3.45□□□□□ -1.86
DNL4YOR005C THI12P42883 340 aa3.45□□□□□ -1.86
DNL4YOR005C THI5P43534 340 aa3.45□□□□□ -1.86
DNL4YOR005C ATG36P46983 293 aa3.45□□□□□ -1.86
DNL4YOR005C THI11P47183 340 aa3.45□□□□□ -1.86
DNL4YOR005C ACS2P52910 683 aaKnown RBP3.45□□□□□ -1.86
DNL4YOR005C THI13Q07748 340 aa3.45□□□□□ -1.86
DNL4YOR005C FRT1Q99332 602 aa3.45□□□□□ -1.86
DNL4YOR005C SRS2P12954 1174 aa3.45□□□□□ -1.86
DNL4YOR005C MET4P32389 672 aa3.45□□□□□ -1.86
DNL4YOR005C MGE1P38523 228 aa3.45□□□□□ -1.86
DNL4YOR005C YEL023CP39992 682 aa3.45□□□□□ -1.86
DNL4YOR005C JIP5Q06214 492 aaPredicted RBP3.45□□□□□ -1.86
DNL4YOR005C APL6P46682 809 aa3.44□□□□□ -1.86
DNL4YOR005C RNH70P53331 553 aa3.44□□□□□ -1.86
DNL4YOR005C FRA1Q07825 749 aa3.44□□□□□ -1.86
DNL4YOR005C YRR1Q12172 810 aa3.44□□□□□ -1.86
DNL4YOR005C CDC25P04821 1589 aa3.44□□□□□ -1.86
DNL4YOR005C MET1P36150 593 aa3.44□□□□□ -1.86
DNL4YOR005C PTC4P38089 393 aa3.44□□□□□ -1.86
DNL4YOR005C QDR1P40475 563 aa3.44□□□□□ -1.86
DNL4YOR005C UTP13Q05946 817 aaKnown RBP3.44□□□□□ -1.86
DNL4YOR005C ERF2Q06551 359 aa3.44□□□□□ -1.86
DNL4YOR005C NTE1Q04958 1679 aa3.44□□□□□ -1.86
DNL4YOR005C KEX2P13134 814 aa3.43□□□□□ -1.86
DNL4YOR005C ATG3P40344 310 aa3.43□□□□□ -1.86
DNL4YOR005C PUN1Q06991 263 aa3.43□□□□□ -1.86
DNL4YOR005C MNL2Q12205 849 aa3.43□□□□□ -1.86
DNL4YOR005C CHD1P32657 1468 aa3.43□□□□□ -1.86
DNL4YOR005C FUR4P05316 633 aaKnown RBP3.43□□□□□ -1.86
DNL4YOR005C ELP4Q02884 456 aaKnown RBP3.43□□□□□ -1.86
DNL4YOR005C YPR084WQ06821 456 aa3.43□□□□□ -1.86
DNL4YOR005C GAS4Q08271 471 aa3.43□□□□□ -1.86
DNL4YOR005C BCK2P33306 851 aa3.43□□□□□ -1.86
DNL4YOR005C GLO3P38682 493 aaKnown RBP3.43□□□□□ -1.86
DNL4YOR005C STE20Q03497 939 aaKnown RBP3.43□□□□□ -1.86
DNL4YOR005C DPL1Q05567 589 aa3.43□□□□□ -1.86
DNL4YOR005C CHL1P22516 861 aaPredicted RBP3.42□□□□□ -1.86
DNL4YOR005C ALD3P54114 506 aa3.42□□□□□ -1.86
DNL4YOR005C TEC1P18412 486 aa3.42□□□□□ -1.86
DNL4YOR005C GUT2P32191 649 aa3.42□□□□□ -1.86
DNL4YOR005C FYV10P40492 516 aa3.42□□□□□ -1.86
DNL4YOR005C FIG4P42837 879 aa3.42□□□□□ -1.86
DNL4YOR005C TBF1Q02457 562 aa3.42□□□□□ -1.86
DNL4YOR005C PEX29Q03370 554 aa3.42□□□□□ -1.86
DNL4YOR005C LSO1Q3E827 93 aa3.42□□□□□ -1.86
DNL4YOR005C TSC13Q99190 310 aa3.42□□□□□ -1.86
DNL4YOR005C DNF2Q12675 1612 aa3.41□□□□□ -1.86
DNL4YOR005C SOH1P38633 127 aa3.41□□□□□ -1.86
DNL4YOR005C VAC8P39968 578 aa3.41□□□□□ -1.86
DNL4YOR005C IOC3P43596 787 aa3.41□□□□□ -1.86
DNL4YOR005C YDL206WQ12424 762 aa3.41□□□□□ -1.86
DNL4YOR005C TUB4P53378 473 aa3.41□□□□□ -1.86
DNL4YOR005C HIR3P47171 1648 aa3.41□□□□□ -1.86
DNL4YOR005C CIT2P08679 460 aa3.4□□□□□ -1.86
DNL4YOR005C VAN1P23642 535 aa3.4□□□□□ -1.86
DNL4YOR005C PRE3P38624 215 aa3.4□□□□□ -1.86
DNL4YOR005C RPA14P50106 137 aa3.4□□□□□ -1.86
DNL4YOR005C VPS16Q03308 798 aa3.4□□□□□ -1.86
DNL4YOR005C AGE1Q04412 482 aa3.4□□□□□ -1.86
DNL4YOR005C ISU2Q12056 156 aa3.4□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms