RNA–Protein interactions for RNA: YOL071W

SDH5, Transcript of Protein required for flavinylation of Sdh1p, yeastyeast

Gene SDH5, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH5YOL071W UTP10P42945 1769 aaKnown RBP12.71□□□□□ -0.37
SDH5YOL071W ALD3P54114 506 aa12.71□□□□□ -0.37
SDH5YOL071W NUP145P49687 1317 aa12.7□□□□□ -0.38
SDH5YOL071W IOC4Q04213 475 aa12.7□□□□□ -0.38
SDH5YOL071W UTP22P53254 1237 aaPredicted RBP12.69□□□□□ -0.38
SDH5YOL071W AKL1P38080 1108 aaKnown RBP12.68□□□□□ -0.38
SDH5YOL071W BUG1Q12191 341 aa12.68□□□□□ -0.38
SDH5YOL071W HSP104P31539 908 aaKnown RBP12.67□□□□□ -0.38
SDH5YOL071W RPG1P38249 964 aaKnown RBP12.67□□□□□ -0.38
SDH5YOL071W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.66□□□□□ -0.38not detected
SDH5YOL071W SSA1P10591 642 aaKnown RBP12.65□□□□□ -0.38
SDH5YOL071W TRK1P12685 1235 aa12.65□□□□□ -0.38
SDH5YOL071W YBP2P53169 641 aa12.65□□□□□ -0.38
SDH5YOL071W GRE2Q12068 342 aaKnown RBP12.65□□□□□ -0.38
SDH5YOL071W PAP2P53632 584 aaKnown RBP12.64□□□□□ -0.39
SDH5YOL071W AOS1Q06624 347 aa12.63□□□□□ -0.39
SDH5YOL071W TOS1P38288 455 aa12.62□□□□□ -0.39
SDH5YOL071W NST1P53935 1240 aa12.61□□□□□ -0.39
SDH5YOL071W MDG1P53885 366 aa12.59□□□□□ -0.39
SDH5YOL071W KCC4P25389 1037 aa12.58□□□□□ -0.4
SDH5YOL071W NTH2P35172 780 aa12.58□□□□□ -0.4
SDH5YOL071W LYS2P07702 1392 aa12.56□□□□□ -0.4
SDH5YOL071W RMT2Q03305 412 aa12.56□□□□□ -0.4
SDH5YOL071W RRP46P53256 223 aaPredicted RBP12.55□□□□□ -0.4
SDH5YOL071W TUM1Q08686 304 aaKnown RBP12.55□□□□□ -0.4
SDH5YOL071W UGA3P26370 528 aa12.54□□□□□ -0.4
SDH5YOL071W SAP155P43612 1002 aa12.54□□□□□ -0.4
SDH5YOL071W PSD2P53037 1138 aaKnown RBP12.54□□□□□ -0.4
SDH5YOL071W YNL050CP53952 270 aa12.53□□□□□ -0.4
SDH5YOL071W PHM7Q12252 991 aa12.51□□□□□ -0.41
SDH5YOL071W NYV1Q12255 253 aa12.51□□□□□ -0.41
SDH5YOL071W HPC2Q01448 625 aa12.49□□□□□ -0.41
SDH5YOL071W NOP53Q12080 455 aaKnown RBP12.49□□□□□ -0.41
SDH5YOL071W NSE3Q05541 303 aa12.48□□□□□ -0.41
SDH5YOL071W CTT1P06115 562 aa12.47□□□□□ -0.41
SDH5YOL071W PRD1P25375 712 aa12.47□□□□□ -0.41
SDH5YOL071W ERT1P38140 529 aa12.47□□□□□ -0.41
SDH5YOL071W RRT14P40470 206 aa12.47□□□□□ -0.41
SDH5YOL071W SSP2Q08646 371 aa12.47□□□□□ -0.41
SDH5YOL071W YKL222CP35995 705 aa12.46□□□□□ -0.41
SDH5YOL071W TEA1P47988 759 aa12.46□□□□□ -0.41
SDH5YOL071W RTR1P40084 226 aaPredicted RBP12.45□□□□□ -0.42
SDH5YOL071W EAF6P47128 113 aa12.45□□□□□ -0.42
SDH5YOL071W MSN5P52918 1224 aa12.45□□□□□ -0.42
SDH5YOL071W ALE1Q08548 619 aa12.45□□□□□ -0.42
SDH5YOL071W MAM1P40065 302 aa12.44□□□□□ -0.42
SDH5YOL071W YFR016CP43597 1233 aaKnown RBP12.44□□□□□ -0.42
SDH5YOL071W RIX7Q07844 837 aaKnown RBP12.43□□□□□ -0.42
SDH5YOL071W RAT1Q02792 1006 aaKnown RBP12.42□□□□□ -0.42
SDH5YOL071W PFF1P38244 976 aa12.41□□□□□ -0.42
SDH5YOL071W BUD27P43573 796 aaKnown RBP RIP-Chip data12.41□□□□□ -0.42not detected
SDH5YOL071W LPD1P09624 499 aaKnown RBP12.4□□□□□ -0.42
SDH5YOL071W ZDS1P50111 915 aaKnown RBP12.4□□□□□ -0.42
SDH5YOL071W DIB1Q06819 143 aaPredicted RBP12.4□□□□□ -0.42
SDH5YOL071W YER156CP40093 338 aaKnown RBP12.39□□□□□ -0.43
SDH5YOL071W RPS9BP05755 195 aaKnown RBP12.37□□□□□ -0.43
SDH5YOL071W SER1P33330 395 aaKnown RBP12.37□□□□□ -0.43
SDH5YOL071W SSK22P25390 1331 aaPredicted RBP12.37□□□□□ -0.43
SDH5YOL071W PMD1P32634 1753 aa12.35□□□□□ -0.43
SDH5YOL071W ARG8P18544 423 aa12.35□□□□□ -0.43
SDH5YOL071W KIN4Q01919 800 aa12.35□□□□□ -0.43
SDH5YOL071W THI22Q06490 572 aa12.35□□□□□ -0.43
SDH5YOL071W GYP7P48365 746 aa12.33□□□□□ -0.44
SDH5YOL071W BMS1Q08965 1183 aaKnown RBP12.33□□□□□ -0.44
SDH5YOL071W CWH41P53008 833 aa12.32□□□□□ -0.44
SDH5YOL071W YGL082WP53155 381 aa12.32□□□□□ -0.44
SDH5YOL071W ERO1Q03103 563 aa12.32□□□□□ -0.44
SDH5YOL071W CTI6Q08923 506 aa12.32□□□□□ -0.44
SDH5YOL071W YPR204WQ08995 1032 aa12.32□□□□□ -0.44
SDH5YOL071W COQ4O13525 335 aa12.31□□□□□ -0.44
SDH5YOL071W RPP0P05317 312 aaKnown RBP12.31□□□□□ -0.44
SDH5YOL071W BDF2Q07442 638 aa12.31□□□□□ -0.44
SDH5YOL071W MPP10P47083 593 aaKnown RBP12.3□□□□□ -0.44
SDH5YOL071W HEF3P53978 1044 aaKnown RBP12.3□□□□□ -0.44
SDH5YOL071W YOL057WQ08225 711 aa12.3□□□□□ -0.44
SDH5YOL071W HKR1P41809 1802 aa12.3□□□□□ -0.44
SDH5YOL071W YDL144CQ07589 356 aa12.29□□□□□ -0.44
SDH5YOL071W RTT109Q07794 436 aa12.29□□□□□ -0.44
SDH5YOL071W DCD1P06773 312 aa12.28□□□□□ -0.44
SDH5YOL071W SIT4P20604 311 aa12.28□□□□□ -0.44
SDH5YOL071W SMY1P32364 656 aaKnown RBP12.28□□□□□ -0.44
SDH5YOL071W YLR271WQ06152 274 aa12.28□□□□□ -0.44
SDH5YOL071W HAT1Q12341 374 aa12.28□□□□□ -0.44
SDH5YOL071W FPK1P53739 893 aa12.27□□□□□ -0.45
SDH5YOL071W DNM1P54861 757 aa12.27□□□□□ -0.45
SDH5YOL071W IRC3Q06683 689 aa12.27□□□□□ -0.45
SDH5YOL071W YJR008WP47085 338 aa12.26□□□□□ -0.45
SDH5YOL071W APL2P36000 726 aaPredicted RBP12.23□□□□□ -0.45
SDH5YOL071W SYF1Q04048 859 aaPredicted RBP12.23□□□□□ -0.45
SDH5YOL071W YDR306CQ06640 478 aa12.23□□□□□ -0.45
SDH5YOL071W CST6P40535 587 aa12.22□□□□□ -0.45
SDH5YOL071W UBP16Q02863 499 aa12.22□□□□□ -0.45
SDH5YOL071W GRX6Q12438 231 aa12.22□□□□□ -0.45
SDH5YOL071W TPD3P31383 635 aa12.21□□□□□ -0.45
SDH5YOL071W SQS1P53866 767 aaKnown RBP12.21□□□□□ -0.45
SDH5YOL071W SRT1Q03175 343 aa12.21□□□□□ -0.45
SDH5YOL071W VPS64Q03944 604 aa12.21□□□□□ -0.45
SDH5YOL071W SWI1P09547 1314 aa12.2□□□□□ -0.46
SDH5YOL071W SHC1P39000 512 aa12.2□□□□□ -0.46
SDH5YOL071W ZDS2P54786 942 aa12.2□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms