RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	TYW1	Q08960	810 aa	Known RBP	2.16	□□□□□ -2.06
SSK2	YNR031C	IPL1	P38991	367 aa		2.15	□□□□□ -2.06
SSK2	YNR031C	BSD2	P38356	321 aa		2.15	□□□□□ -2.07
SSK2	YNR031C	WHI3	P34761	661 aa	Known RBP	2.15	□□□□□ -2.07
SSK2	YNR031C	EAF6	P47128	113 aa		2.15	□□□□□ -2.07
SSK2	YNR031C	GLC3	P32775	704 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	MAP2	P38174	421 aa	Known RBP	2.14	□□□□□ -2.07
SSK2	YNR031C	TUM1	Q08686	304 aa	Known RBP	2.14	□□□□□ -2.07
SSK2	YNR031C	RAD9	P14737	1309 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	MHP1	P43638	1398 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	RSC30	P38781	883 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	AUS1	Q08409	1394 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	HO	P09932	586 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	YKL222C	P35995	705 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	VHR2	P40041	505 aa		2.14	□□□□□ -2.07
SSK2	YNR031C	MSN5	P52918	1224 aa		2.13	□□□□□ -2.07
SSK2	YNR031C	RRT14	P40470	206 aa		2.13	□□□□□ -2.07
SSK2	YNR031C	STB3	Q12427	513 aa		2.13	□□□□□ -2.07
SSK2	YNR031C	RTG2	P32608	588 aa	Known RBP	2.13	□□□□□ -2.07
SSK2	YNR031C	SLI15	P38283	698 aa		2.13	□□□□□ -2.07
SSK2	YNR031C	DOT5	P40553	215 aa		2.12	□□□□□ -2.07
SSK2	YNR031C	YIL089W	P40500	205 aa		2.12	□□□□□ -2.07
SSK2	YNR031C	NYV1	Q12255	253 aa		2.12	□□□□□ -2.07
SSK2	YNR031C	RET1	P22276	1149 aa	Known RBP	2.11	□□□□□ -2.07
SSK2	YNR031C	GSC2	P40989	1895 aa		2.11	□□□□□ -2.07
SSK2	YNR031C	RIF1	P29539	1916 aa		2.11	□□□□□ -2.07
SSK2	YNR031C	YFL040W	P43562	540 aa		2.1	□□□□□ -2.07
SSK2	YNR031C	NOP53	Q12080	455 aa	Known RBP	2.1	□□□□□ -2.07
SSK2	YNR031C	THS1	P04801	734 aa	Known RBP	2.1	□□□□□ -2.07
SSK2	YNR031C	CST9	Q06032	482 aa		2.1	□□□□□ -2.07
SSK2	YNR031C	MYO1	P08964	1928 aa		2.09	□□□□□ -2.07
SSK2	YNR031C	YNR029C	P53729	429 aa	Known RBP	2.09	□□□□□ -2.07
SSK2	YNR031C	YHR131C	P38835	850 aa		2.09	□□□□□ -2.07
SSK2	YNR031C	NAP1	P25293	417 aa	Known RBP	2.09	□□□□□ -2.08
SSK2	YNR031C	FKH1	P40466	484 aa		2.09	□□□□□ -2.08
SSK2	YNR031C	FOX2	Q02207	900 aa	Known RBP	2.09	□□□□□ -2.08
SSK2	YNR031C	MSC7	P38694	644 aa		2.08	□□□□□ -2.08
SSK2	YNR031C	SIS2	P36024	562 aa		2.08	□□□□□ -2.08
SSK2	YNR031C	RPP0	P05317	312 aa	Known RBP	2.08	□□□□□ -2.08
SSK2	YNR031C	IES2	P40154	320 aa		2.08	□□□□□ -2.08
SSK2	YNR031C	MRX12	P47084	519 aa		2.08	□□□□□ -2.08
SSK2	YNR031C	HVG1	P0CE11	249 aa		2.08	□□□□□ -2.08
SSK2	YNR031C	ERT1	P38140	529 aa		2.08	□□□□□ -2.08
SSK2	YNR031C	STS1	P38637	319 aa		2.08	□□□□□ -2.08
SSK2	YNR031C	RPL40A	P0CH08	128 aa	Known RBP	2.07	□□□□□ -2.08
SSK2	YNR031C	RPL40B	P0CH09	128 aa	Known RBP	2.07	□□□□□ -2.08
SSK2	YNR031C	PAH1	P32567	862 aa		2.07	□□□□□ -2.08
SSK2	YNR031C	UTP22	P53254	1237 aa	Predicted RBP	2.07	□□□□□ -2.08
SSK2	YNR031C	BUG1	Q12191	341 aa		2.06	□□□□□ -2.08
SSK2	YNR031C	KTR4	P38131	464 aa		2.06	□□□□□ -2.08
SSK2	YNR031C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.06	□□□□□ -2.08	not detected
SSK2	YNR031C	BCH2	P36122	765 aa		2.06	□□□□□ -2.08
SSK2	YNR031C	TAO3	P40468	2376 aa		2.06	□□□□□ -2.08
SSK2	YNR031C	FIR1	P40020	876 aa		2.06	□□□□□ -2.08
SSK2	YNR031C	YJR008W	P47085	338 aa		2.06	□□□□□ -2.08
SSK2	YNR031C	ATG20	Q07528	640 aa		2.06	□□□□□ -2.08
SSK2	YNR031C	PRP45	P28004	379 aa	Predicted RBP	2.05	□□□□□ -2.08
SSK2	YNR031C	SEC3	P33332	1336 aa	Known RBP	2.05	□□□□□ -2.08
SSK2	YNR031C	MOT2	P34909	587 aa	Known RBP	2.05	□□□□□ -2.08
SSK2	YNR031C	SCY1	P53009	804 aa		2.05	□□□□□ -2.08
SSK2	YNR031C	KIN4	Q01919	800 aa		2.05	□□□□□ -2.08
SSK2	YNR031C	DBP1	P24784	617 aa	Known RBP	2.05	□□□□□ -2.08
SSK2	YNR031C	PSD2	P53037	1138 aa	Known RBP	2.05	□□□□□ -2.08
SSK2	YNR031C	ART5	P53244	586 aa	Known RBP	2.05	□□□□□ -2.08
SSK2	YNR031C	RIA1	P53893	1110 aa		2.05	□□□□□ -2.08
SSK2	YNR031C	FMP30	Q02883	468 aa		2.05	□□□□□ -2.08
SSK2	YNR031C	UBP10	P53874	792 aa	Predicted RBP	2.04	□□□□□ -2.08
SSK2	YNR031C	CWC15	Q03772	175 aa	Known RBP	2.04	□□□□□ -2.08
SSK2	YNR031C	AHC1	Q12433	566 aa		2.04	□□□□□ -2.08
SSK2	YNR031C	EBP2	P36049	427 aa	Known RBP	2.04	□□□□□ -2.08
SSK2	YNR031C	TOS1	P38288	455 aa		2.04	□□□□□ -2.08
SSK2	YNR031C	PEA2	P40091	420 aa		2.04	□□□□□ -2.08
SSK2	YNR031C	HPC2	Q01448	625 aa		2.04	□□□□□ -2.08
SSK2	YNR031C	ATG13	Q06628	738 aa		2.04	□□□□□ -2.08
SSK2	YNR031C	APE3	P37302	537 aa	Known RBP	2.04	□□□□□ -2.08
SSK2	YNR031C	SHC1	P39000	512 aa		2.04	□□□□□ -2.08
SSK2	YNR031C	PRP5	P21372	849 aa	Predicted RBP	2.03	□□□□□ -2.08
SSK2	YNR031C	KRI1	P42846	591 aa	Known RBP	2.03	□□□□□ -2.08
SSK2	YNR031C	UBP9	P39967	754 aa		2.03	□□□□□ -2.09
SSK2	YNR031C	ZDS1	P50111	915 aa	Known RBP	2.03	□□□□□ -2.09
SSK2	YNR031C	RRT6	P53117	311 aa	Predicted RBP	2.03	□□□□□ -2.09
SSK2	YNR031C	CWH41	P53008	833 aa		2.02	□□□□□ -2.09
SSK2	YNR031C	SAS10	Q12136	610 aa	Predicted RBP	2.02	□□□□□ -2.09
SSK2	YNR031C	SSK22	P25390	1331 aa	Predicted RBP	2.02	□□□□□ -2.09
SSK2	YNR031C	RPO41	P13433	1351 aa	Known RBP	2.02	□□□□□ -2.09
SSK2	YNR031C	RIM101	P33400	625 aa		2.02	□□□□□ -2.09
SSK2	YNR031C	LDH1	P38139	375 aa		2.02	□□□□□ -2.09
SSK2	YNR031C	CWC22	P53333	577 aa	Known RBP	2.02	□□□□□ -2.09
SSK2	YNR031C	ECM30	Q06673	1274 aa		2.02	□□□□□ -2.09
SSK2	YNR031C	DAP1	Q12091	152 aa		2.02	□□□□□ -2.09
SSK2	YNR031C	CAB3	P36076	571 aa		2.02	□□□□□ -2.09
SSK2	YNR031C	TYS1	P36421	394 aa	Known RBP	2.02	□□□□□ -2.09
SSK2	YNR031C	MSB4	Q12317	492 aa		2.02	□□□□□ -2.09
SSK2	YNR031C	OXP1	P28273	1286 aa		2.01	□□□□□ -2.09
SSK2	YNR031C	GAP1	P19145	602 aa	Predicted RBP	2.01	□□□□□ -2.09
SSK2	YNR031C	YKR075C	P36155	307 aa		2.01	□□□□□ -2.09
SSK2	YNR031C	YIR014W	P40570	242 aa		2.01	□□□□□ -2.09
SSK2	YNR031C	TAF5	P38129	798 aa		2.01	□□□□□ -2.09
SSK2	YNR031C	TIM50	Q02776	476 aa		2.01	□□□□□ -2.09
SSK2	YNR031C	ECM16	Q04217	1267 aa	Known RBP	2.01	□□□□□ -2.09

Retrieved 100 of 5,963 RNA–protein pairs in 559.8 ms