RNA–Protein interactions for RNA: YNR017W

TIM23, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM23, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM23YNR017W YBL086CP38177 466 aa14.28□□□□□ -0.12
TIM23YNR017W GTT3P39996 337 aa14.28□□□□□ -0.12
TIM23YNR017W RTR1P40084 226 aaPredicted RBP14.28□□□□□ -0.12
TIM23YNR017W AOS1Q06624 347 aa14.28□□□□□ -0.12
TIM23YNR017W NTH2P35172 780 aa14.26□□□□□ -0.13
TIM23YNR017W UGA2P38067 497 aa14.26□□□□□ -0.13
TIM23YNR017W SSA1P10591 642 aaKnown RBP14.24□□□□□ -0.13
TIM23YNR017W PRD1P25375 712 aa14.23□□□□□ -0.13
TIM23YNR017W ALD2P47771 506 aa14.23□□□□□ -0.13
TIM23YNR017W YBP2P53169 641 aa14.23□□□□□ -0.13
TIM23YNR017W GRX1P25373 110 aaKnown RBP14.22□□□□□ -0.13
TIM23YNR017W MSB4Q12317 492 aa14.22□□□□□ -0.13
TIM23YNR017W KCC4P25389 1037 aa14.2□□□□□ -0.14
TIM23YNR017W CTH1P47976 325 aa14.2□□□□□ -0.14
TIM23YNR017W SSA2P10592 639 aaKnown RBP14.19□□□□□ -0.14
TIM23YNR017W YNL050CP53952 270 aa14.19□□□□□ -0.14
TIM23YNR017W MPP10P47083 593 aaKnown RBP14.18□□□□□ -0.14
TIM23YNR017W RAD4P14736 754 aa14.16□□□□□ -0.14
TIM23YNR017W BDF1P35817 686 aa14.16□□□□□ -0.14
TIM23YNR017W YDL144CQ07589 356 aa14.16□□□□□ -0.14
TIM23YNR017W UGA3P26370 528 aa14.15□□□□□ -0.14
TIM23YNR017W THI22Q06490 572 aa14.15□□□□□ -0.14
TIM23YNR017W TUM1Q08686 304 aaKnown RBP14.14□□□□□ -0.15
TIM23YNR017W GRE2Q12068 342 aaKnown RBP14.14□□□□□ -0.15
TIM23YNR017W RMT2Q03305 412 aa14.13□□□□□ -0.15
TIM23YNR017W ALE1Q08548 619 aa14.12□□□□□ -0.15
TIM23YNR017W BUG1Q12191 341 aa14.12□□□□□ -0.15
TIM23YNR017W ZDS1P50111 915 aaKnown RBP14.11□□□□□ -0.15
TIM23YNR017W NSE3Q05541 303 aa14.11□□□□□ -0.15
TIM23YNR017W UTP10P42945 1769 aaKnown RBP14.11□□□□□ -0.15
TIM23YNR017W RPP0P05317 312 aaKnown RBP14.09□□□□□ -0.15
TIM23YNR017W RPG1P38249 964 aaKnown RBP14.09□□□□□ -0.15
TIM23YNR017W MAM1P40065 302 aa14.09□□□□□ -0.15
TIM23YNR017W ALD3P54114 506 aa14.09□□□□□ -0.15
TIM23YNR017W RTT109Q07794 436 aa14.09□□□□□ -0.15
TIM23YNR017W NOP53Q12080 455 aaKnown RBP14.08□□□□□ -0.16
TIM23YNR017W LYS2P07702 1392 aa14.08□□□□□ -0.16
TIM23YNR017W SAP155P43612 1002 aa14.06□□□□□ -0.16
TIM23YNR017W UTP22P53254 1237 aaPredicted RBP14.06□□□□□ -0.16
TIM23YNR017W HEF3P53978 1044 aaKnown RBP14.06□□□□□ -0.16
TIM23YNR017W TPD3P31383 635 aa14.05□□□□□ -0.16
TIM23YNR017W MDG1P53885 366 aa14.05□□□□□ -0.16
TIM23YNR017W RRT14P40470 206 aa14.04□□□□□ -0.16
TIM23YNR017W BMS1Q08965 1183 aaKnown RBP14.04□□□□□ -0.16
TIM23YNR017W VPS27P40343 622 aaKnown RBP14.03□□□□□ -0.16
TIM23YNR017W GYP7P48365 746 aa14.03□□□□□ -0.16
TIM23YNR017W COQ4O13525 335 aa14.02□□□□□ -0.17
TIM23YNR017W PHM7Q12252 991 aa14.02□□□□□ -0.17
TIM23YNR017W NYV1Q12255 253 aa14.02□□□□□ -0.17
TIM23YNR017W TEA1P47988 759 aa14.01□□□□□ -0.17
TIM23YNR017W SSP2Q08646 371 aa14.01□□□□□ -0.17
TIM23YNR017W SUI2P20459 304 aaKnown RBP14□□□□□ -0.17
TIM23YNR017W TOS1P38288 455 aa14□□□□□ -0.17
TIM23YNR017W YBR287WP38355 427 aa14□□□□□ -0.17
TIM23YNR017W BUD27P43573 796 aaKnown RBP RIP-Chip data14□□□□□ -0.17not detected
TIM23YNR017W CDC45Q08032 650 aa13.99□□□□□ -0.17
TIM23YNR017W YFR016CP43597 1233 aaKnown RBP13.97□□□□□ -0.17
TIM23YNR017W HPC2Q01448 625 aa13.97□□□□□ -0.17
TIM23YNR017W SER1P33330 395 aaKnown RBP13.96□□□□□ -0.17
TIM23YNR017W YOL057WQ08225 711 aa13.95□□□□□ -0.18
TIM23YNR017W SRT1Q03175 343 aa13.94□□□□□ -0.18
TIM23YNR017W YGL082WP53155 381 aa13.93□□□□□ -0.18
TIM23YNR017W RIX7Q07844 837 aaKnown RBP13.93□□□□□ -0.18
TIM23YNR017W ARG8P18544 423 aa13.92□□□□□ -0.18
TIM23YNR017W ZDS2P54786 942 aa13.92□□□□□ -0.18
TIM23YNR017W RVB2Q12464 471 aaKnown RBP13.91□□□□□ -0.18
TIM23YNR017W NSR1P27476 414 aaKnown RBP RIP-Chip data13.9□□□□□ -0.18not detected
TIM23YNR017W PRS1P32895 427 aaKnown RBP13.9□□□□□ -0.18
TIM23YNR017W APL2P36000 726 aaPredicted RBP13.9□□□□□ -0.18
TIM23YNR017W VPS64Q03944 604 aa13.9□□□□□ -0.18
TIM23YNR017W CTI6Q08923 506 aa13.9□□□□□ -0.18
TIM23YNR017W LPD1P09624 499 aaKnown RBP13.89□□□□□ -0.19
TIM23YNR017W RRD1P40454 393 aaKnown RBP13.89□□□□□ -0.19
TIM23YNR017W YPR204WQ08995 1032 aa13.89□□□□□ -0.19
TIM23YNR017W YRB30P53107 440 aaPredicted RBP13.88□□□□□ -0.19
TIM23YNR017W DCD1P06773 312 aa13.87□□□□□ -0.19
TIM23YNR017W DNM1P54861 757 aa13.87□□□□□ -0.19
TIM23YNR017W RAT1Q02792 1006 aaKnown RBP13.87□□□□□ -0.19
TIM23YNR017W MSN5P52918 1224 aa13.86□□□□□ -0.19
TIM23YNR017W YDR306CQ06640 478 aa13.86□□□□□ -0.19
TIM23YNR017W EAF6P47128 113 aa13.85□□□□□ -0.19
TIM23YNR017W CST6P40535 587 aa13.84□□□□□ -0.19
TIM23YNR017W MAK21Q12176 1025 aaKnown RBP13.84□□□□□ -0.19
TIM23YNR017W MRP7P12687 371 aa13.83□□□□□ -0.2
TIM23YNR017W NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.83□□□□□ -0.2not detected
TIM23YNR017W SWI1P09547 1314 aa13.83□□□□□ -0.2
TIM23YNR017W PMD1P32634 1753 aa13.82□□□□□ -0.2
TIM23YNR017W YLR271WQ06152 274 aa13.82□□□□□ -0.2
TIM23YNR017W YJR008WP47085 338 aa13.81□□□□□ -0.2
TIM23YNR017W DIB1Q06819 143 aaPredicted RBP13.81□□□□□ -0.2
TIM23YNR017W NUP133P36161 1157 aa13.8□□□□□ -0.2
TIM23YNR017W ERT1P38140 529 aa13.8□□□□□ -0.2
TIM23YNR017W SSK22P25390 1331 aaPredicted RBP13.8□□□□□ -0.2
TIM23YNR017W CTT1P06115 562 aa13.79□□□□□ -0.2
TIM23YNR017W YKL222CP35995 705 aa13.79□□□□□ -0.2
TIM23YNR017W PFF1P38244 976 aa13.79□□□□□ -0.2
TIM23YNR017W PKH1Q03407 766 aa13.79□□□□□ -0.2
TIM23YNR017W BDF2Q07442 638 aa13.79□□□□□ -0.2
TIM23YNR017W YPP1P46951 817 aa13.78□□□□□ -0.2
TIM23YNR017W HAT1Q12341 374 aa13.78□□□□□ -0.2
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms