RNA–Protein interactions for RNA: YNL212W

VID27, Transcript of Cytoplasmic protein of unknown function, yeast

Gene VID27, Length 2,349 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID27	YNL212W	YIL177C	P40434	1758 aa		5.05	□□□□□ -1.6
VID27	YNL212W	YJL225C	P40889	1758 aa		5.05	□□□□□ -1.6
VID27	YNL212W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.04	□□□□□ -1.6
VID27	YNL212W	MAM3	Q12296	706 aa		5.04	□□□□□ -1.6
VID27	YNL212W	BRN1	P38170	754 aa		5.03	□□□□□ -1.6
VID27	YNL212W	DSF2	P38213	736 aa		5.03	□□□□□ -1.6
VID27	YNL212W	SET1	P38827	1080 aa	Known RBP	5.03	□□□□□ -1.6
VID27	YNL212W	IES2	P40154	320 aa		5.03	□□□□□ -1.6
VID27	YNL212W	RIM15	P43565	1770 aa		5.03	□□□□□ -1.6
VID27	YNL212W	FIG2	P25653	1609 aa		5.03	□□□□□ -1.6
VID27	YNL212W	MSN5	P52918	1224 aa		5.03	□□□□□ -1.6
VID27	YNL212W	RIA1	P53893	1110 aa		5.03	□□□□□ -1.6
VID27	YNL212W	KRE5	P22023	1365 aa		5.02	□□□□□ -1.61
VID27	YNL212W	GUA1	P38625	525 aa	Known RBP	5.02	□□□□□ -1.61
VID27	YNL212W	CST9	Q06032	482 aa		5.02	□□□□□ -1.61
VID27	YNL212W	FAS2	P19097	1887 aa	Known RBP	5.02	□□□□□ -1.61
VID27	YNL212W	GLC3	P32775	704 aa		5.02	□□□□□ -1.61
VID27	YNL212W	TFC8	Q12308	588 aa		5.02	□□□□□ -1.61
VID27	YNL212W	RTG2	P32608	588 aa	Known RBP	5.01	□□□□□ -1.61
VID27	YNL212W	BSD2	P38356	321 aa		5.01	□□□□□ -1.61
VID27	YNL212W	NUG1	P40010	520 aa	Known RBP	5.01	□□□□□ -1.61
VID27	YNL212W	NYV1	Q12255	253 aa		5.01	□□□□□ -1.61
VID27	YNL212W	YLR419W	Q06698	1435 aa	Known RBP	5.01	□□□□□ -1.61
VID27	YNL212W	SLD2	P34252	453 aa		5.01	□□□□□ -1.61
VID27	YNL212W	PAM1	P37304	830 aa	Known RBP	5.01	□□□□□ -1.61
VID27	YNL212W	ERT1	P38140	529 aa		5.01	□□□□□ -1.61
VID27	YNL212W	UTP22	P53254	1237 aa	Predicted RBP	5.01	□□□□□ -1.61
VID27	YNL212W	FBP1	P09201	348 aa		5	□□□□□ -1.61
VID27	YNL212W	AIM7	Q12156	149 aa		5	□□□□□ -1.61
VID27	YNL212W	RRT14	P40470	206 aa		4.99	□□□□□ -1.61
VID27	YNL212W	ATG36	P46983	293 aa		4.99	□□□□□ -1.61
VID27	YNL212W	PBS2	P08018	668 aa		4.98	□□□□□ -1.61
VID27	YNL212W	SWE1	P32944	819 aa		4.98	□□□□□ -1.61
VID27	YNL212W	YIL089W	P40500	205 aa		4.98	□□□□□ -1.61
VID27	YNL212W	RET1	P22276	1149 aa	Known RBP	4.97	□□□□□ -1.61
VID27	YNL212W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
VID27	YNL212W	PRP45	P28004	379 aa	Predicted RBP	4.97	□□□□□ -1.61
VID27	YNL212W	TOS1	P38288	455 aa		4.97	□□□□□ -1.61
VID27	YNL212W	RTS3	P53289	263 aa		4.97	□□□□□ -1.61
VID27	YNL212W	FAR11	P53917	953 aa		4.97	□□□□□ -1.61
VID27	YNL212W	WHI3	P34761	661 aa	Known RBP	4.97	□□□□□ -1.61
VID27	YNL212W	SPC42	P36094	363 aa		4.97	□□□□□ -1.61
VID27	YNL212W	VHR2	P40041	505 aa		4.97	□□□□□ -1.61
VID27	YNL212W	SUB1	P54000	292 aa	Known RBP	4.97	□□□□□ -1.61
VID27	YNL212W	RRN6	P32786	894 aa		4.96	□□□□□ -1.61
VID27	YNL212W	RSC30	P38781	883 aa		4.96	□□□□□ -1.62
VID27	YNL212W	RAM2	P29703	316 aa		4.95	□□□□□ -1.62
VID27	YNL212W	YKR075C	P36155	307 aa		4.95	□□□□□ -1.62
VID27	YNL212W	TUM1	Q08686	304 aa	Known RBP	4.95	□□□□□ -1.62
VID27	YNL212W	BUG1	Q12191	341 aa		4.95	□□□□□ -1.62
VID27	YNL212W	SLI15	P38283	698 aa		4.95	□□□□□ -1.62
VID27	YNL212W	RSM7	P47150	247 aa		4.95	□□□□□ -1.62
VID27	YNL212W	HPC2	Q01448	625 aa		4.95	□□□□□ -1.62
VID27	YNL212W	TFB3	Q03290	321 aa		4.95	□□□□□ -1.62
VID27	YNL212W	VPS72	Q03388	795 aa		4.95	□□□□□ -1.62
VID27	YNL212W	ASF1	P32447	279 aa		4.94	□□□□□ -1.62
VID27	YNL212W	DOS2	P54858	310 aa		4.94	□□□□□ -1.62
VID27	YNL212W	KIN4	Q01919	800 aa		4.94	□□□□□ -1.62
VID27	YNL212W	YJR008W	P47085	338 aa		4.93	□□□□□ -1.62
VID27	YNL212W	GSC2	P40989	1895 aa		4.93	□□□□□ -1.62
VID27	YNL212W	THS1	P04801	734 aa	Known RBP	4.91	□□□□□ -1.62
VID27	YNL212W	PRP5	P21372	849 aa	Predicted RBP	4.91	□□□□□ -1.62
VID27	YNL212W	DIT2	P21595	489 aa		4.91	□□□□□ -1.62
VID27	YNL212W	HEM3	P28789	327 aa		4.91	□□□□□ -1.62
VID27	YNL212W	HVG1	P0CE11	249 aa		4.91	□□□□□ -1.62
VID27	YNL212W	OCA5	P38738	679 aa		4.91	□□□□□ -1.62
VID27	YNL212W	GIN4	Q12263	1142 aa		4.91	□□□□□ -1.62
VID27	YNL212W	MDG1	P53885	366 aa		4.9	□□□□□ -1.62
VID27	YNL212W	FAP1	P53971	965 aa		4.9	□□□□□ -1.62
VID27	YNL212W	PKC1	P24583	1151 aa		4.89	□□□□□ -1.63
VID27	YNL212W	SSF1	P38789	453 aa	Predicted RBP	4.89	□□□□□ -1.63
VID27	YNL212W	ATG20	Q07528	640 aa		4.89	□□□□□ -1.63
VID27	YNL212W	MAK21	Q12176	1025 aa	Known RBP	4.89	□□□□□ -1.63
VID27	YNL212W	BIM1	P40013	344 aa		4.88	□□□□□ -1.63
VID27	YNL212W	YFL040W	P43562	540 aa		4.88	□□□□□ -1.63
VID27	YNL212W	NUP42	P49686	430 aa	Known RBP	4.88	□□□□□ -1.63
VID27	YNL212W	TPO2	P53283	614 aa		4.88	□□□□□ -1.63
VID27	YNL212W	SEN54	Q02825	467 aa	Predicted RBP	4.88	□□□□□ -1.63
VID27	YNL212W	CDC3	P32457	520 aa	Known RBP	4.88	□□□□□ -1.63
VID27	YNL212W	SHC1	P39000	512 aa		4.88	□□□□□ -1.63
VID27	YNL212W	OSW7	P43611	510 aa		4.88	□□□□□ -1.63
VID27	YNL212W	PSD2	P53037	1138 aa	Known RBP	4.88	□□□□□ -1.63
VID27	YNL212W	ATF2	P53296	535 aa		4.88	□□□□□ -1.63
VID27	YNL212W	RPL34A	P87262	121 aa	Predicted RBP	4.88	□□□□□ -1.63
VID27	YNL212W	MOT2	P34909	587 aa	Known RBP	4.87	□□□□□ -1.63
VID27	YNL212W	TAF5	P38129	798 aa		4.87	□□□□□ -1.63
VID27	YNL212W	ALD4	P46367	519 aa	Known RBP	4.87	□□□□□ -1.63
VID27	YNL212W	MSB4	Q12317	492 aa		4.87	□□□□□ -1.63
VID27	YNL212W	TCB1	Q12466	1186 aa		4.87	□□□□□ -1.63
VID27	YNL212W	YJL007C	P47080	104 aa		4.86	□□□□□ -1.63
VID27	YNL212W	YAF9	P53930	226 aa		4.86	□□□□□ -1.63
VID27	YNL212W	RAD4	P14736	754 aa		4.86	□□□□□ -1.63
VID27	YNL212W	BUD21	Q08492	214 aa	Predicted RBP	4.86	□□□□□ -1.63
VID27	YNL212W	COB	P00163	385 aa		4.85	□□□□□ -1.63
VID27	YNL212W	ATG32	P40458	529 aa		4.85	□□□□□ -1.63
VID27	YNL212W	FPR4	Q06205	392 aa	Predicted RBP	4.85	□□□□□ -1.63
VID27	YNL212W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
VID27	YNL212W	CPS1	P27614	576 aa		4.84	□□□□□ -1.63
VID27	YNL212W	ZDS2	P54786	942 aa		4.84	□□□□□ -1.63
VID27	YNL212W	NMD2	P38798	1089 aa	Known RBP	4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms