RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W YML133CQ03099 1374 aa20.26■□□□□ 0.83
SCJ1YMR214W YLL067CQ07888 1374 aa20.26■□□□□ 0.83
SCJ1YMR214W YLL066CQ99208 1374 aa20.26■□□□□ 0.83
SCJ1YMR214W MLP1Q02455 1875 aaKnown RBP20.26■□□□□ 0.83
SCJ1YMR214W MHP1P43638 1398 aa20.24■□□□□ 0.83
SCJ1YMR214W YKL222CP35995 705 aa20.24■□□□□ 0.83
SCJ1YMR214W CWH41P53008 833 aa20.2■□□□□ 0.82
SCJ1YMR214W OSM1P21375 501 aaKnown RBP20.17■□□□□ 0.82
SCJ1YMR214W RIX7Q07844 837 aaKnown RBP20.16■□□□□ 0.82
SCJ1YMR214W KIN4Q01919 800 aa20.14■□□□□ 0.81
SCJ1YMR214W YBP2P53169 641 aa20.13■□□□□ 0.81
SCJ1YMR214W PUS5Q06244 254 aa20.13■□□□□ 0.81
SCJ1YMR214W ERT1P38140 529 aa20.12■□□□□ 0.81
SCJ1YMR214W INP54Q08227 384 aaKnown RBP20.1■□□□□ 0.81
SCJ1YMR214W SEC3P33332 1336 aaKnown RBP20.09■□□□□ 0.81
SCJ1YMR214W GRX4P32642 244 aa20.08■□□□□ 0.81
SCJ1YMR214W FKH1P40466 484 aa20.07■□□□□ 0.8
SCJ1YMR214W FPK1P53739 893 aa20.05■□□□□ 0.8
SCJ1YMR214W CTI6Q08923 506 aa20.04■□□□□ 0.8
SCJ1YMR214W SLI15P38283 698 aa20■□□□□ 0.79
SCJ1YMR214W TAP42Q04372 366 aa20■□□□□ 0.79
SCJ1YMR214W TOP1P04786 769 aa19.97■□□□□ 0.79
SCJ1YMR214W RTG3P38165 486 aa19.97■□□□□ 0.79
SCJ1YMR214W PDS5Q04264 1277 aa19.97■□□□□ 0.79
SCJ1YMR214W TUM1Q08686 304 aaKnown RBP19.97■□□□□ 0.79
SCJ1YMR214W NYV1Q12255 253 aa19.97■□□□□ 0.79
SCJ1YMR214W HIM1Q06674 414 aa19.96■□□□□ 0.79
SCJ1YMR214W AUS1Q08409 1394 aa19.95■□□□□ 0.79
SCJ1YMR214W NST1P53935 1240 aa19.95■□□□□ 0.78
SCJ1YMR214W BUD27P43573 796 aaKnown RBP RIP-Chip data19.91■□□□□ 0.78not detected
SCJ1YMR214W HSP104P31539 908 aaKnown RBP19.9■□□□□ 0.78
SCJ1YMR214W PFF1P38244 976 aa19.9■□□□□ 0.78
SCJ1YMR214W BUB1P41695 1021 aaKnown RBP RIP-Chip data19.9■□□□□ 0.78not detected
SCJ1YMR214W THS1P04801 734 aaKnown RBP19.87■□□□□ 0.77
SCJ1YMR214W SMY1P32364 656 aaKnown RBP19.87■□□□□ 0.77
SCJ1YMR214W NUP145P49687 1317 aa19.86■□□□□ 0.77
SCJ1YMR214W TEA1P47988 759 aa19.86■□□□□ 0.77
SCJ1YMR214W LPD1P09624 499 aaKnown RBP19.85■□□□□ 0.77
SCJ1YMR214W PSD2P53037 1138 aaKnown RBP19.85■□□□□ 0.77
SCJ1YMR214W RMT2Q03305 412 aa19.84■□□□□ 0.77
SCJ1YMR214W RET1P22276 1149 aaKnown RBP19.83■□□□□ 0.77
SCJ1YMR214W RPS9BP05755 195 aaKnown RBP19.82■□□□□ 0.76
SCJ1YMR214W KAR2P16474 682 aaKnown RBP19.82■□□□□ 0.76
SCJ1YMR214W SER1P33330 395 aaKnown RBP19.82■□□□□ 0.76
SCJ1YMR214W CTF4Q01454 927 aa19.82■□□□□ 0.76
SCJ1YMR214W ICL1P28240 557 aaPredicted RBP19.81■□□□□ 0.76
SCJ1YMR214W DSD1P53095 428 aa19.81■□□□□ 0.76
SCJ1YMR214W IRC3Q06683 689 aa19.81■□□□□ 0.76
SCJ1YMR214W ATG20Q07528 640 aa19.8■□□□□ 0.76
SCJ1YMR214W DUS1P53759 423 aaKnown RBP19.79■□□□□ 0.76
SCJ1YMR214W MDG1P53885 366 aa19.78■□□□□ 0.76
SCJ1YMR214W SHC1P39000 512 aa19.74■□□□□ 0.75
SCJ1YMR214W RAT1Q02792 1006 aaKnown RBP19.74■□□□□ 0.75
SCJ1YMR214W ERO1Q03103 563 aa19.74■□□□□ 0.75
SCJ1YMR214W RTG2P32608 588 aaKnown RBP19.73■□□□□ 0.75
SCJ1YMR214W NOP53Q12080 455 aaKnown RBP19.73■□□□□ 0.75
SCJ1YMR214W YKU70P32807 602 aa19.72■□□□□ 0.75
SCJ1YMR214W PAP2P53632 584 aaKnown RBP19.72■□□□□ 0.75
SCJ1YMR214W YFR016CP43597 1233 aaKnown RBP19.71■□□□□ 0.75
SCJ1YMR214W BDF2Q07442 638 aa19.7■□□□□ 0.74
SCJ1YMR214W VHR2P40041 505 aa19.69■□□□□ 0.74
SCJ1YMR214W AOS1Q06624 347 aa19.69■□□□□ 0.74
SCJ1YMR214W YLR278CQ05854 1341 aa19.68■□□□□ 0.74
SCJ1YMR214W YGL082WP53155 381 aa19.67■□□□□ 0.74
SCJ1YMR214W PHM7Q12252 991 aa19.66■□□□□ 0.74
SCJ1YMR214W AKL1P38080 1108 aaKnown RBP19.64■□□□□ 0.73
SCJ1YMR214W ETP1P38748 585 aaKnown RBP19.64■□□□□ 0.73
SCJ1YMR214W DIB1Q06819 143 aaPredicted RBP19.64■□□□□ 0.73
SCJ1YMR214W ALE1Q08548 619 aa19.64■□□□□ 0.73
SCJ1YMR214W GRX6Q12438 231 aa19.64■□□□□ 0.73
SCJ1YMR214W CAF20P12962 161 aaKnown RBP19.63■□□□□ 0.73
SCJ1YMR214W KCC4P25389 1037 aa19.62■□□□□ 0.73
SCJ1YMR214W TOM1Q03280 3268 aa19.62■□□□□ 0.73
SCJ1YMR214W TRK1P12685 1235 aa19.6■□□□□ 0.73
SCJ1YMR214W UTP10P42945 1769 aaKnown RBP19.58■□□□□ 0.73
SCJ1YMR214W SIT4P20604 311 aa19.58■□□□□ 0.72
SCJ1YMR214W MSM1P22438 575 aa19.57■□□□□ 0.72
SCJ1YMR214W AIM7Q12156 149 aa19.57■□□□□ 0.72
SCJ1YMR214W SSP2Q08646 371 aa19.55■□□□□ 0.72
SCJ1YMR214W POM152P39685 1337 aa19.53■□□□□ 0.72
SCJ1YMR214W PMD1P32634 1753 aa19.53■□□□□ 0.72
SCJ1YMR214W FAS2P19097 1887 aaKnown RBP19.52■□□□□ 0.72
SCJ1YMR214W DIP2Q12220 943 aaPredicted RBP19.52■□□□□ 0.72
SCJ1YMR214W RPN1P38764 993 aaKnown RBP19.51■□□□□ 0.71
SCJ1YMR214W SAS4Q04003 481 aa19.51■□□□□ 0.71
SCJ1YMR214W SDH2P21801 266 aa19.5■□□□□ 0.71
SCJ1YMR214W FET4P40988 552 aa19.5■□□□□ 0.71
SCJ1YMR214W YIL089WP40500 205 aa19.48■□□□□ 0.71
SCJ1YMR214W TIM50Q02776 476 aa19.47■□□□□ 0.71
SCJ1YMR214W GLC3P32775 704 aa19.46■□□□□ 0.71
SCJ1YMR214W FRD1P32614 470 aaKnown RBP19.45■□□□□ 0.7
SCJ1YMR214W GAP1P19145 602 aaPredicted RBP19.44■□□□□ 0.7
SCJ1YMR214W NTH2P35172 780 aa19.44■□□□□ 0.7
SCJ1YMR214W DPL1Q05567 589 aa19.42■□□□□ 0.7
SCJ1YMR214W TIF6Q12522 245 aaKnown RBP19.41■□□□□ 0.7
SCJ1YMR214W UGA3P26370 528 aa19.4■□□□□ 0.7
SCJ1YMR214W PEA2P40091 420 aa19.4■□□□□ 0.7
SCJ1YMR214W NSR1P27476 414 aaKnown RBP RIP-Chip data19.39■□□□□ 0.69not detected
SCJ1YMR214W RRP46P53256 223 aaPredicted RBP19.39■□□□□ 0.69
SCJ1YMR214W TRM44Q02648 567 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms