RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W YNL035CP53962 389 aaKnown RBP8.46□□□□□ -1.05
CTF3YLR381W DNM1P54861 757 aa8.46□□□□□ -1.05
CTF3YLR381W ROM2P51862 1356 aaKnown RBP8.46□□□□□ -1.06
CTF3YLR381W SRS2P12954 1174 aa8.46□□□□□ -1.06
CTF3YLR381W MRC1P25588 1096 aa8.46□□□□□ -1.06
CTF3YLR381W RPN12P32496 274 aa8.46□□□□□ -1.06
CTF3YLR381W TFG1P41895 735 aaPredicted RBP8.46□□□□□ -1.06
CTF3YLR381W NOP7P53261 605 aaKnown RBP8.46□□□□□ -1.06
CTF3YLR381W NUP145P49687 1317 aa8.45□□□□□ -1.06
CTF3YLR381W CLN1P20437 546 aa8.45□□□□□ -1.06
CTF3YLR381W RAD16P31244 790 aa8.45□□□□□ -1.06
CTF3YLR381W GLE1Q12315 538 aa8.45□□□□□ -1.06
CTF3YLR381W ISW1P38144 1129 aa8.45□□□□□ -1.06
CTF3YLR381W RPG1P38249 964 aaKnown RBP8.45□□□□□ -1.06
CTF3YLR381W ARP5P53946 755 aa8.45□□□□□ -1.06
CTF3YLR381W YDL144CQ07589 356 aa8.45□□□□□ -1.06
CTF3YLR381W GEA2P39993 1459 aaKnown RBP8.45□□□□□ -1.06
CTF3YLR381W SUI2P20459 304 aaKnown RBP8.44□□□□□ -1.06
CTF3YLR381W MPE1P35728 441 aaKnown RBP8.44□□□□□ -1.06
CTF3YLR381W YOR1P53049 1477 aa8.44□□□□□ -1.06
CTF3YLR381W RRT14P40470 206 aa8.44□□□□□ -1.06
CTF3YLR381W KEX2P13134 814 aa8.43□□□□□ -1.06
CTF3YLR381W RFC1P38630 861 aaKnown RBP8.43□□□□□ -1.06
CTF3YLR381W BDH2P39713 417 aa8.43□□□□□ -1.06
CTF3YLR381W CIR1P42940 261 aa8.43□□□□□ -1.06
CTF3YLR381W KRE33P53914 1056 aaKnown RBP8.43□□□□□ -1.06
CTF3YLR381W PDI1P17967 522 aaKnown RBP8.42□□□□□ -1.06
CTF3YLR381W MPH1P40562 993 aa8.42□□□□□ -1.06
CTF3YLR381W CFT2Q12102 859 aaPredicted RBP8.42□□□□□ -1.06
CTF3YLR381W ESC1Q03661 1658 aaKnown RBP8.42□□□□□ -1.06
CTF3YLR381W DSF2P38213 736 aa8.42□□□□□ -1.06
CTF3YLR381W SIT1P39980 628 aa8.42□□□□□ -1.06
CTF3YLR381W JJJ1P53863 590 aa8.42□□□□□ -1.06
CTF3YLR381W TLG2Q08144 397 aa8.42□□□□□ -1.06
CTF3YLR381W YKL068W-AQ3E826 78 aa8.42□□□□□ -1.06
CTF3YLR381W NUF2P33895 451 aa8.41□□□□□ -1.06
CTF3YLR381W EXO84P38261 753 aa8.41□□□□□ -1.06
CTF3YLR381W TPS3P38426 1054 aaKnown RBP8.41□□□□□ -1.06
CTF3YLR381W TOM71P38825 639 aaKnown RBP8.41□□□□□ -1.06
CTF3YLR381W RVS167P39743 482 aaKnown RBP8.41□□□□□ -1.06
CTF3YLR381W IMH1Q06704 911 aaKnown RBP8.41□□□□□ -1.06
CTF3YLR381W MRPS28P21771 286 aa8.41□□□□□ -1.06
CTF3YLR381W HSP104P31539 908 aaKnown RBP8.41□□□□□ -1.06
CTF3YLR381W UBX2Q04228 584 aa8.41□□□□□ -1.06
CTF3YLR381W GDB1Q06625 1536 aa8.4□□□□□ -1.06
CTF3YLR381W VPS15P22219 1454 aa8.4□□□□□ -1.06
CTF3YLR381W ARD1P07347 238 aaPredicted RBP8.4□□□□□ -1.06
CTF3YLR381W BRF1P29056 596 aa8.4□□□□□ -1.06
CTF3YLR381W SWI6P09959 803 aa8.39□□□□□ -1.07
CTF3YLR381W THR4P16120 514 aaKnown RBP8.39□□□□□ -1.07
CTF3YLR381W PET123P17558 318 aa8.39□□□□□ -1.07
CTF3YLR381W STE20Q03497 939 aaKnown RBP8.39□□□□□ -1.07
CTF3YLR381W YPL225WQ08971 146 aaKnown RBP8.39□□□□□ -1.07
CTF3YLR381W RSM25P40496 264 aa8.39□□□□□ -1.07
CTF3YLR381W SPO19Q03029 223 aa8.39□□□□□ -1.07
CTF3YLR381W ARO80Q04052 950 aa8.39□□□□□ -1.07
CTF3YLR381W YMR196WQ04336 1088 aa8.39□□□□□ -1.07
CTF3YLR381W PDR15Q04182 1529 aaKnown RBP8.38□□□□□ -1.07
CTF3YLR381W CDC3P32457 520 aaKnown RBP8.38□□□□□ -1.07
CTF3YLR381W ARO1P08566 1588 aaKnown RBP8.38□□□□□ -1.07
CTF3YLR381W EFB1P32471 206 aaKnown RBP8.38□□□□□ -1.07
CTF3YLR381W NPR3P38742 1146 aa8.38□□□□□ -1.07
CTF3YLR381W HST1P53685 503 aa8.38□□□□□ -1.07
CTF3YLR381W RCF1Q03713 159 aa8.38□□□□□ -1.07
CTF3YLR381W DNF1P32660 1571 aa8.37□□□□□ -1.07
CTF3YLR381W GCD6P32501 712 aaKnown RBP8.37□□□□□ -1.07
CTF3YLR381W PRP31P49704 494 aaPredicted RBP8.37□□□□□ -1.07
CTF3YLR381W TIM50Q02776 476 aa8.37□□□□□ -1.07
CTF3YLR381W INP2Q03824 705 aa8.37□□□□□ -1.07
CTF3YLR381W AUS1Q08409 1394 aa8.37□□□□□ -1.07
CTF3YLR381W PIM1P36775 1133 aa8.37□□□□□ -1.07
CTF3YLR381W MVP1P40959 511 aaKnown RBP8.37□□□□□ -1.07
CTF3YLR381W APL6P46682 809 aa8.37□□□□□ -1.07
CTF3YLR381W INP52P50942 1183 aa8.37□□□□□ -1.07
CTF3YLR381W VPS5Q92331 675 aa8.37□□□□□ -1.07
CTF3YLR381W TY3B-IQ7LHG5 1498 aaKnown RBP8.37□□□□□ -1.07
CTF3YLR381W MFT1P33441 392 aaKnown RBP8.36□□□□□ -1.07
CTF3YLR381W BUD27P43573 796 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
CTF3YLR381W PUF6Q04373 656 aaKnown RBP8.36□□□□□ -1.07
CTF3YLR381W NKP1Q12493 238 aa8.36□□□□□ -1.07
CTF3YLR381W YME2P32843 850 aa8.35□□□□□ -1.07
CTF3YLR381W PET100P38958 111 aa8.35□□□□□ -1.07
CTF3YLR381W POL32P47110 350 aa8.35□□□□□ -1.07
CTF3YLR381W GYL1Q04322 720 aa8.35□□□□□ -1.07
CTF3YLR381W SLD2P34252 453 aa8.35□□□□□ -1.07
CTF3YLR381W MRPL10P36520 322 aa8.35□□□□□ -1.07
CTF3YLR381W SEC26P41810 973 aaKnown RBP8.35□□□□□ -1.07
CTF3YLR381W CCM1P48237 864 aaPredicted RBP8.35□□□□□ -1.07
CTF3YLR381W RRB1Q04225 511 aaKnown RBP8.35□□□□□ -1.07
CTF3YLR381W LSO1Q3E827 93 aa8.35□□□□□ -1.07
CTF3YLR381W YML133CQ03099 1374 aa8.35□□□□□ -1.07
CTF3YLR381W YLL067CQ07888 1374 aa8.35□□□□□ -1.07
CTF3YLR381W YLL066CQ99208 1374 aa8.35□□□□□ -1.07
CTF3YLR381W TAF13P11747 167 aa8.34□□□□□ -1.07
CTF3YLR381W MAK11P20484 414 aaKnown RBP8.34□□□□□ -1.07
CTF3YLR381W MTR4P47047 1073 aaKnown RBP8.34□□□□□ -1.07
CTF3YLR381W RPO31P04051 1460 aa8.34□□□□□ -1.07
CTF3YLR381W IQG1Q12280 1495 aa8.34□□□□□ -1.07
CTF3YLR381W KEX1P09620 729 aa8.34□□□□□ -1.07
CTF3YLR381W BRN1P38170 754 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms