RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YPR084WQ06821 456 aa3.74□□□□□ -1.81
SGD1YLR336C EMP47P43555 445 aa3.73□□□□□ -1.81
SGD1YLR336C ITT1Q04638 464 aa3.73□□□□□ -1.81
SGD1YLR336C RAS1P01119 309 aa3.72□□□□□ -1.81
SGD1YLR336C TEC1P18412 486 aa3.72□□□□□ -1.81
SGD1YLR336C SSA4P22202 642 aaKnown RBP3.72□□□□□ -1.81
SGD1YLR336C RRD1P40454 393 aaKnown RBP3.72□□□□□ -1.81
SGD1YLR336C TPD3P31383 635 aa3.72□□□□□ -1.81
SGD1YLR336C NOB1Q08444 459 aaKnown RBP3.72□□□□□ -1.81
SGD1YLR336C VAC17P25591 423 aa3.71□□□□□ -1.82
SGD1YLR336C PEP12P32854 288 aa3.71□□□□□ -1.82
SGD1YLR336C FRA1Q07825 749 aa3.71□□□□□ -1.82
SGD1YLR336C PUP1P25043 261 aa3.71□□□□□ -1.82
SGD1YLR336C YPP1P46951 817 aa3.71□□□□□ -1.82
SGD1YLR336C CST6P40535 587 aa3.7□□□□□ -1.82
SGD1YLR336C BDP1P46678 594 aa3.7□□□□□ -1.82
SGD1YLR336C STE20Q03497 939 aaKnown RBP3.7□□□□□ -1.82
SGD1YLR336C YML083CQ04526 418 aa3.7□□□□□ -1.82
SGD1YLR336C PUS5Q06244 254 aa3.7□□□□□ -1.82
SGD1YLR336C SSA1P10591 642 aaKnown RBP3.7□□□□□ -1.82
SGD1YLR336C GUT2P32191 649 aa3.7□□□□□ -1.82
SGD1YLR336C MRF1P30775 413 aaPredicted RBP3.69□□□□□ -1.82
SGD1YLR336C TGL4P36165 910 aa3.69□□□□□ -1.82
SGD1YLR336C APL6P46682 809 aa3.69□□□□□ -1.82
SGD1YLR336C KTR7P40504 517 aa3.69□□□□□ -1.82
SGD1YLR336C ENV9Q08651 330 aa3.68□□□□□ -1.82
SGD1YLR336C FRK1Q03002 865 aaPredicted RBP3.68□□□□□ -1.82
SGD1YLR336C RGA2Q06407 1009 aa3.68□□□□□ -1.82
SGD1YLR336C SIS2P36024 562 aa3.67□□□□□ -1.82
SGD1YLR336C GEF1P37020 779 aa3.67□□□□□ -1.82
SGD1YLR336C RGA1P39083 1007 aa3.67□□□□□ -1.82
SGD1YLR336C SOH1P38633 127 aa3.67□□□□□ -1.82
SGD1YLR336C IXR1P33417 597 aa3.66□□□□□ -1.82
SGD1YLR336C MRX12P47084 519 aa3.66□□□□□ -1.82
SGD1YLR336C ECM23Q02710 187 aa3.66□□□□□ -1.82
SGD1YLR336C KIP2P28743 706 aa3.66□□□□□ -1.82
SGD1YLR336C HAL5P38970 855 aaKnown RBP3.66□□□□□ -1.82
SGD1YLR336C TRK1P12685 1235 aa3.65□□□□□ -1.82
SGD1YLR336C APP1P53933 587 aa3.65□□□□□ -1.82
SGD1YLR336C AMS1P22855 1083 aa3.65□□□□□ -1.83
SGD1YLR336C SYH1Q02875 849 aaKnown RBP3.64□□□□□ -1.83
SGD1YLR336C GAL2P13181 574 aa3.64□□□□□ -1.83
SGD1YLR336C ISR1Q06098 443 aaKnown RBP3.64□□□□□ -1.83
SGD1YLR336C EMW1P42842 904 aaKnown RBP3.64□□□□□ -1.83
SGD1YLR336C CLA4P48562 842 aa3.64□□□□□ -1.83
SGD1YLR336C UTP13Q05946 817 aaKnown RBP3.64□□□□□ -1.83
SGD1YLR336C YEL077CQ3E7X8 1277 aa3.64□□□□□ -1.83
SGD1YLR336C ATG20Q07528 640 aa3.63□□□□□ -1.83
SGD1YLR336C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SGD1YLR336C UBX7P38349 436 aa3.63□□□□□ -1.83
SGD1YLR336C ATG3P40344 310 aa3.63□□□□□ -1.83
SGD1YLR336C ACS2P52910 683 aaKnown RBP3.63□□□□□ -1.83
SGD1YLR336C RPL34AP87262 121 aaPredicted RBP3.62□□□□□ -1.83
SGD1YLR336C MIP1P15801 1254 aa3.61□□□□□ -1.83
SGD1YLR336C PDI1P17967 522 aaKnown RBP3.61□□□□□ -1.83
SGD1YLR336C PHO87P25360 923 aa3.61□□□□□ -1.83
SGD1YLR336C SLX8P40072 274 aa3.61□□□□□ -1.83
SGD1YLR336C ROM1P53046 1155 aa3.61□□□□□ -1.83
SGD1YLR336C HDA3Q06623 655 aa3.61□□□□□ -1.83
SGD1YLR336C MRT4P33201 236 aaKnown RBP3.61□□□□□ -1.83
SGD1YLR336C HED1Q03937 162 aa3.61□□□□□ -1.83
SGD1YLR336C TSC13Q99190 310 aa3.61□□□□□ -1.83
SGD1YLR336C TPS3P38426 1054 aaKnown RBP3.6□□□□□ -1.83
SGD1YLR336C AIR1P40507 360 aaKnown RBP3.6□□□□□ -1.83
SGD1YLR336C ISU1Q03020 165 aa3.6□□□□□ -1.83
SGD1YLR336C MET32Q12041 191 aa3.6□□□□□ -1.83
SGD1YLR336C HAP4P14064 554 aa3.59□□□□□ -1.83
SGD1YLR336C AIM9P40053 627 aaKnown RBP3.59□□□□□ -1.83
SGD1YLR336C YML020WQ03722 664 aa3.59□□□□□ -1.83
SGD1YLR336C FBP26P32604 452 aa3.59□□□□□ -1.83
SGD1YLR336C YBL086CP38177 466 aa3.59□□□□□ -1.83
SGD1YLR336C CDC3P32457 520 aaKnown RBP3.58□□□□□ -1.84
SGD1YLR336C MKS1P34072 584 aa3.58□□□□□ -1.84
SGD1YLR336C CWC15Q03772 175 aaKnown RBP3.58□□□□□ -1.84
SGD1YLR336C NTH2P35172 780 aa3.57□□□□□ -1.84
SGD1YLR336C DFG5Q05031 458 aa3.57□□□□□ -1.84
SGD1YLR336C STE6P12866 1290 aa3.57□□□□□ -1.84
SGD1YLR336C GAS4Q08271 471 aa3.57□□□□□ -1.84
SGD1YLR336C SPT2P06843 333 aaPredicted RBP3.57□□□□□ -1.84
SGD1YLR336C UTR2P32623 467 aa3.57□□□□□ -1.84
SGD1YLR336C NOP8Q08287 484 aaPredicted RBP3.57□□□□□ -1.84
SGD1YLR336C SWI5P08153 709 aa3.56□□□□□ -1.84
SGD1YLR336C RPS6AP0CX37 236 aaKnown RBP3.56□□□□□ -1.84
SGD1YLR336C RPS6BP0CX38 236 aaPredicted RBP3.56□□□□□ -1.84
SGD1YLR336C HAT1Q12341 374 aa3.56□□□□□ -1.84
SGD1YLR336C YFL034WP43564 1073 aa3.56□□□□□ -1.84
SGD1YLR336C PUF6Q04373 656 aaKnown RBP3.56□□□□□ -1.84
SGD1YLR336C DAT1P13483 248 aaKnown RBP3.55□□□□□ -1.84
SGD1YLR336C SUV3P32580 737 aa3.55□□□□□ -1.84
SGD1YLR336C WTM2Q12206 467 aa3.55□□□□□ -1.84
SGD1YLR336C CDC4P07834 779 aa3.55□□□□□ -1.84
SGD1YLR336C BDS1Q08347 646 aa3.55□□□□□ -1.84
SGD1YLR336C VAN1P23642 535 aa3.54□□□□□ -1.84
SGD1YLR336C ASH1P34233 588 aa3.54□□□□□ -1.84
SGD1YLR336C SSF1P38789 453 aaPredicted RBP3.54□□□□□ -1.84
SGD1YLR336C PUN1Q06991 263 aa3.54□□□□□ -1.84
SGD1YLR336C PNP1Q05788 311 aa3.54□□□□□ -1.84
SGD1YLR336C CYT1P07143 309 aa3.53□□□□□ -1.84
SGD1YLR336C UBP1P25037 809 aa3.53□□□□□ -1.84
SGD1YLR336C GBP2P25555 427 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms