RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	IOC4	Q04213	475 aa		5.6	□□□□□ -1.51
CLF1	YLR117C	COG8	Q04632	607 aa		5.6	□□□□□ -1.51
CLF1	YLR117C	SFI1	Q12369	946 aa		5.6	□□□□□ -1.51
CLF1	YLR117C	DNF2	Q12675	1612 aa		5.6	□□□□□ -1.51
CLF1	YLR117C	STU2	P46675	888 aa		5.59	□□□□□ -1.51
CLF1	YLR117C	MRS2	Q01926	470 aa		5.59	□□□□□ -1.51
CLF1	YLR117C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
CLF1	YLR117C	YDL144C	Q07589	356 aa		5.59	□□□□□ -1.51
CLF1	YLR117C	SWH1	P35845	1188 aa		5.59	□□□□□ -1.52
CLF1	YLR117C	YGL140C	P53120	1219 aa		5.59	□□□□□ -1.52
CLF1	YLR117C	YMR102C	Q03177	834 aa		5.59	□□□□□ -1.52
CLF1	YLR117C	SML1	Q04964	104 aa		5.58	□□□□□ -1.52
CLF1	YLR117C	RRP15	Q06511	250 aa	Predicted RBP	5.58	□□□□□ -1.52
CLF1	YLR117C	CEP3	P40969	608 aa		5.57	□□□□□ -1.52
CLF1	YLR117C	ROM2	P51862	1356 aa	Known RBP	5.57	□□□□□ -1.52
CLF1	YLR117C	PSE1	P32337	1089 aa	Known RBP	5.57	□□□□□ -1.52
CLF1	YLR117C	MIC60	P36112	540 aa		5.57	□□□□□ -1.52
CLF1	YLR117C	TIF4632	P39936	914 aa	Known RBP	5.57	□□□□□ -1.52
CLF1	YLR117C	BUD3	P25558	1636 aa		5.56	□□□□□ -1.52
CLF1	YLR117C	SRS2	P12954	1174 aa		5.56	□□□□□ -1.52
CLF1	YLR117C	RTT107	P38850	1070 aa		5.56	□□□□□ -1.52
CLF1	YLR117C	VPS30	Q02948	557 aa		5.56	□□□□□ -1.52
CLF1	YLR117C	ERV41	Q04651	352 aa		5.56	□□□□□ -1.52
CLF1	YLR117C	MDM38	Q08179	573 aa		5.56	□□□□□ -1.52
CLF1	YLR117C	PUS1	Q12211	544 aa	Known RBP	5.56	□□□□□ -1.52
CLF1	YLR117C	RAD3	P06839	778 aa		5.55	□□□□□ -1.52
CLF1	YLR117C	RPS0A	P32905	252 aa	Known RBP	5.55	□□□□□ -1.52
CLF1	YLR117C	RRP14	P36080	434 aa	Known RBP	5.55	□□□□□ -1.52
CLF1	YLR117C	PBY1	P38254	753 aa		5.55	□□□□□ -1.52
CLF1	YLR117C	YNL050C	P53952	270 aa		5.55	□□□□□ -1.52
CLF1	YLR117C	SEC39	Q12745	709 aa		5.55	□□□□□ -1.52
CLF1	YLR117C	LTE1	P07866	1435 aa		5.55	□□□□□ -1.52
CLF1	YLR117C	IQG1	Q12280	1495 aa		5.55	□□□□□ -1.52
CLF1	YLR117C	SPT5	P27692	1063 aa	Known RBP	5.55	□□□□□ -1.52
CLF1	YLR117C	CYC8	P14922	966 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	BUD31	P25337	157 aa	Predicted RBP	5.54	□□□□□ -1.52
CLF1	YLR117C	MSH1	P25846	959 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	BCH2	P36122	765 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	CKB1	P43639	278 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.54	□□□□□ -1.52	not detected
CLF1	YLR117C	YVC1	Q12324	675 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	PET111	P08468	800 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	RPN12	P32496	274 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	ZUO1	P32527	433 aa	Known RBP	5.54	□□□□□ -1.52
CLF1	YLR117C	SLX5	P32828	619 aa	Known RBP	5.54	□□□□□ -1.52
CLF1	YLR117C	VPS41	P38959	992 aa		5.54	□□□□□ -1.52
CLF1	YLR117C	RSC8	P43609	557 aa	Known RBP	5.54	□□□□□ -1.52
CLF1	YLR117C	RRT14	P40470	206 aa		5.53	□□□□□ -1.52
CLF1	YLR117C	CIR1	P42940	261 aa		5.53	□□□□□ -1.52
CLF1	YLR117C	BDP1	P46678	594 aa		5.53	□□□□□ -1.52
CLF1	YLR117C	PXR1	P53335	271 aa	Predicted RBP	5.53	□□□□□ -1.52
CLF1	YLR117C	YSP2	Q06681	1438 aa		5.53	□□□□□ -1.52
CLF1	YLR117C	RVS167	P39743	482 aa	Known RBP	5.52	□□□□□ -1.53
CLF1	YLR117C	POL32	P47110	350 aa		5.52	□□□□□ -1.53
CLF1	YLR117C	HAP1	P0CE41	1502 aa		5.52	□□□□□ -1.53
CLF1	YLR117C	PUP2	P32379	260 aa		5.52	□□□□□ -1.53
CLF1	YLR117C	GDT1	P38301	280 aa	Predicted RBP	5.52	□□□□□ -1.53
CLF1	YLR117C	BDH2	P39713	417 aa		5.52	□□□□□ -1.53
CLF1	YLR117C	KRE33	P53914	1056 aa	Known RBP	5.52	□□□□□ -1.53
CLF1	YLR117C	APL5	Q08951	932 aa	Known RBP	5.52	□□□□□ -1.53
CLF1	YLR117C	RPC82	P32349	654 aa		5.51	□□□□□ -1.53
CLF1	YLR117C	YNL035C	P53962	389 aa	Known RBP	5.51	□□□□□ -1.53
CLF1	YLR117C	ALD3	P54114	506 aa		5.51	□□□□□ -1.53
CLF1	YLR117C	TLG1	Q03322	224 aa		5.51	□□□□□ -1.53
CLF1	YLR117C	RIO2	P40160	425 aa	Known RBP	5.51	□□□□□ -1.53
CLF1	YLR117C	DOP1	Q03921	1698 aa		5.5	□□□□□ -1.53
CLF1	YLR117C	SNF2	P22082	1703 aa		5.5	□□□□□ -1.53
CLF1	YLR117C	KAR3	P17119	729 aa		5.5	□□□□□ -1.53
CLF1	YLR117C	MPE1	P35728	441 aa	Known RBP	5.5	□□□□□ -1.53
CLF1	YLR117C	YIL092W	P40497	633 aa		5.5	□□□□□ -1.53
CLF1	YLR117C	MGA2	P40578	1113 aa		5.5	□□□□□ -1.53
CLF1	YLR117C	MPP10	P47083	593 aa	Known RBP	5.5	□□□□□ -1.53
CLF1	YLR117C	ORM2	Q06144	216 aa		5.5	□□□□□ -1.53
CLF1	YLR117C	MFT1	P33441	392 aa	Known RBP	5.49	□□□□□ -1.53
CLF1	YLR117C	TGL3	P40308	642 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
CLF1	YLR117C	ARP5	P53946	755 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	TIM50	Q02776	476 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	TLG2	Q08144	397 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	NUP145	P49687	1317 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	DAL5	P15365	543 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	MRC1	P25588	1096 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	NDC80	P40460	691 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	HST1	P53685	503 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	YKL068W-A	Q3E826	78 aa		5.49	□□□□□ -1.53
CLF1	YLR117C	SEC7	P11075	2009 aa	Known RBP	5.48	□□□□□ -1.53
CLF1	YLR117C	CHC1	P22137	1653 aa	Known RBP	5.48	□□□□□ -1.53
CLF1	YLR117C	DRS2	P39524	1355 aa		5.48	□□□□□ -1.53
CLF1	YLR117C	AUS1	Q08409	1394 aa		5.48	□□□□□ -1.53
CLF1	YLR117C	NPA3	P47122	385 aa		5.48	□□□□□ -1.53
CLF1	YLR117C	YLL054C	Q12244	843 aa		5.48	□□□□□ -1.53
CLF1	YLR117C	SUP35	P05453	685 aa	Known RBP	5.47	□□□□□ -1.53
CLF1	YLR117C	MNR2	P35724	969 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	RSM25	P40496	264 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	NDL1	Q06568	189 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	PEX19	Q07418	342 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	BUD21	Q08492	214 aa	Predicted RBP	5.47	□□□□□ -1.53
CLF1	YLR117C	SLP1	Q12232	587 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	TOP1	P04786	769 aa		5.47	□□□□□ -1.53
CLF1	YLR117C	SEC14	P24280	304 aa	Known RBP	5.47	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms