RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C TPD3P31383 635 aa12.61□□□□□ -0.39
ARP6YLR085C RPO41P13433 1351 aaKnown RBP12.6□□□□□ -0.39
ARP6YLR085C PRP45P28004 379 aaPredicted RBP12.6□□□□□ -0.39
ARP6YLR085C MST1P07236 462 aa12.59□□□□□ -0.39
ARP6YLR085C PRP5P21372 849 aaPredicted RBP12.59□□□□□ -0.39
ARP6YLR085C THI22Q06490 572 aa12.59□□□□□ -0.39
ARP6YLR085C MGA2P40578 1113 aa12.57□□□□□ -0.4
ARP6YLR085C AKL1P38080 1108 aaKnown RBP12.55□□□□□ -0.4
ARP6YLR085C YRB30P53107 440 aaPredicted RBP12.55□□□□□ -0.4
ARP6YLR085C RTT109Q07794 436 aa12.53□□□□□ -0.4
ARP6YLR085C MRM1P25270 412 aa12.52□□□□□ -0.41
ARP6YLR085C FPR3P38911 411 aaKnown RBP12.52□□□□□ -0.41
ARP6YLR085C MSB3P48566 633 aaPredicted RBP12.52□□□□□ -0.41
ARP6YLR085C RRP5Q05022 1729 aaKnown RBP12.51□□□□□ -0.41
ARP6YLR085C YRF1-2P40105 1681 aa12.51□□□□□ -0.41
ARP6YLR085C SLM3Q12093 417 aa12.51□□□□□ -0.41
ARP6YLR085C YIL177CP40434 1758 aa12.5□□□□□ -0.41
ARP6YLR085C YJL225CP40889 1758 aa12.5□□□□□ -0.41
ARP6YLR085C YFR006WP43590 535 aa12.5□□□□□ -0.41
ARP6YLR085C DSD1P53095 428 aa12.5□□□□□ -0.41
ARP6YLR085C HEF3P53978 1044 aaKnown RBP12.49□□□□□ -0.41
ARP6YLR085C NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.49□□□□□ -0.41not detected
ARP6YLR085C RAD2P07276 1031 aa12.48□□□□□ -0.41
ARP6YLR085C TCB1Q12466 1186 aa12.48□□□□□ -0.41
ARP6YLR085C DAL5P15365 543 aa12.47□□□□□ -0.41
ARP6YLR085C HSP104P31539 908 aaKnown RBP12.47□□□□□ -0.41
ARP6YLR085C FKS3Q04952 1785 aa12.46□□□□□ -0.41
ARP6YLR085C URB1P34241 1764 aaKnown RBP12.46□□□□□ -0.42
ARP6YLR085C XKS1P42826 600 aa12.45□□□□□ -0.42
ARP6YLR085C APC1P53886 1748 aa12.44□□□□□ -0.42
ARP6YLR085C YRF1-4O13559 1382 aa12.44□□□□□ -0.42
ARP6YLR085C NTH2P35172 780 aa12.43□□□□□ -0.42
ARP6YLR085C RRT14P40470 206 aa12.43□□□□□ -0.42
ARP6YLR085C ZDS1P50111 915 aaKnown RBP12.43□□□□□ -0.42
ARP6YLR085C YNL050CP53952 270 aa12.43□□□□□ -0.42
ARP6YLR085C ENT1Q12518 454 aa12.43□□□□□ -0.42
ARP6YLR085C YBR287WP38355 427 aa12.42□□□□□ -0.42
ARP6YLR085C CST9Q06032 482 aa12.42□□□□□ -0.42
ARP6YLR085C AOS1Q06624 347 aa12.42□□□□□ -0.42
ARP6YLR085C MAK21Q12176 1025 aaKnown RBP12.42□□□□□ -0.42
ARP6YLR085C GYP7P48365 746 aa12.41□□□□□ -0.42
ARP6YLR085C SIS1P25294 352 aaKnown RBP12.4□□□□□ -0.42
ARP6YLR085C YIL092WP40497 633 aa12.4□□□□□ -0.42
ARP6YLR085C RCR1P38212 213 aa12.39□□□□□ -0.43
ARP6YLR085C BUD27P43573 796 aaKnown RBP RIP-Chip data12.39□□□□□ -0.43not detected
ARP6YLR085C SIR4P11978 1358 aa12.39□□□□□ -0.43
ARP6YLR085C GTT3P39996 337 aa12.38□□□□□ -0.43
ARP6YLR085C MAM1P40065 302 aa12.38□□□□□ -0.43
ARP6YLR085C CTF4Q01454 927 aa12.37□□□□□ -0.43
ARP6YLR085C APP1P53933 587 aa12.36□□□□□ -0.43
ARP6YLR085C ENV9Q08651 330 aa12.36□□□□□ -0.43
ARP6YLR085C RSF2P46974 1380 aa12.35□□□□□ -0.43
ARP6YLR085C IES2P40154 320 aa12.34□□□□□ -0.43
ARP6YLR085C BMS1Q08965 1183 aaKnown RBP12.34□□□□□ -0.43
ARP6YLR085C YBL029C-AQ3E756 94 aa12.34□□□□□ -0.43
ARP6YLR085C RPC31P17890 251 aa12.33□□□□□ -0.44
ARP6YLR085C POL32P47110 350 aa12.33□□□□□ -0.44
ARP6YLR085C SRT1Q03175 343 aa12.33□□□□□ -0.44
ARP6YLR085C KCC4P25389 1037 aa12.32□□□□□ -0.44
ARP6YLR085C NSE3Q05541 303 aa12.32□□□□□ -0.44
ARP6YLR085C COQ4O13525 335 aa12.31□□□□□ -0.44
ARP6YLR085C PUF6Q04373 656 aaKnown RBP12.31□□□□□ -0.44
ARP6YLR085C UGA3P26370 528 aa12.3□□□□□ -0.44
ARP6YLR085C MEC3Q02574 474 aa12.3□□□□□ -0.44
ARP6YLR085C INP54Q08227 384 aaKnown RBP12.3□□□□□ -0.44
ARP6YLR085C NUP145P49687 1317 aa12.29□□□□□ -0.44
ARP6YLR085C EDE1P34216 1381 aa12.29□□□□□ -0.44
ARP6YLR085C TRP5P00931 707 aaKnown RBP12.28□□□□□ -0.44
ARP6YLR085C YKL133CP36066 463 aa12.27□□□□□ -0.45
ARP6YLR085C YMR1P47147 688 aaKnown RBP RIP-Chip data12.26□□□□□ -0.45not detected
ARP6YLR085C IMH1Q06704 911 aaKnown RBP12.26□□□□□ -0.45
ARP6YLR085C VNX1P42839 908 aa12.25□□□□□ -0.45
ARP6YLR085C YPP1P46951 817 aa12.25□□□□□ -0.45
ARP6YLR085C ADE16P54113 591 aaKnown RBP12.25□□□□□ -0.45
ARP6YLR085C ATG13Q06628 738 aa12.25□□□□□ -0.45
ARP6YLR085C NOP8Q08287 484 aaPredicted RBP12.25□□□□□ -0.45
ARP6YLR085C ALE1Q08548 619 aa12.25□□□□□ -0.45
ARP6YLR085C WSC3Q12215 556 aa12.25□□□□□ -0.45
ARP6YLR085C FRK1Q03002 865 aaPredicted RBP12.24□□□□□ -0.45
ARP6YLR085C CSI1Q04368 295 aa12.24□□□□□ -0.45
ARP6YLR085C RAD4P14736 754 aa12.23□□□□□ -0.45
ARP6YLR085C OSM1P21375 501 aaKnown RBP12.23□□□□□ -0.45
ARP6YLR085C PIB1Q06651 286 aa12.23□□□□□ -0.45
ARP6YLR085C YRF1-3P0CX14 1859 aa12.23□□□□□ -0.45
ARP6YLR085C YRF1-7P0CX15 1859 aa12.23□□□□□ -0.45
ARP6YLR085C YRF1-6P53819 1859 aa12.23□□□□□ -0.45
ARP6YLR085C YFR016CP43597 1233 aaKnown RBP12.22□□□□□ -0.45
ARP6YLR085C SPP1Q03012 353 aa12.22□□□□□ -0.45
ARP6YLR085C YNG2P38806 282 aaKnown RBP12.21□□□□□ -0.45
ARP6YLR085C YOL057WQ08225 711 aa12.21□□□□□ -0.45
ARP6YLR085C YBP2P53169 641 aa12.19□□□□□ -0.46
ARP6YLR085C MRP7P12687 371 aa12.18□□□□□ -0.46
ARP6YLR085C VPS29P38759 282 aa12.18□□□□□ -0.46
ARP6YLR085C YGR122WP53272 402 aa12.18□□□□□ -0.46
ARP6YLR085C LYS2P07702 1392 aa12.18□□□□□ -0.46
ARP6YLR085C DBP1P24784 617 aaKnown RBP12.17□□□□□ -0.46
ARP6YLR085C RAD24P32641 659 aa12.17□□□□□ -0.46
ARP6YLR085C SPO1P53541 631 aa12.17□□□□□ -0.46
ARP6YLR085C ZDS2P54786 942 aa12.17□□□□□ -0.46
ARP6YLR085C RMT2Q03305 412 aa12.16□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms