RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C MGA2P40578 1113 aa6.8□□□□□ -1.32
BUD28YLR062C LAM6Q08001 693 aa6.8□□□□□ -1.32
BUD28YLR062C GAS4Q08271 471 aa6.8□□□□□ -1.32
BUD28YLR062C YRF1-4O13559 1382 aa6.8□□□□□ -1.32
BUD28YLR062C PRP40P33203 583 aaKnown RBP6.79□□□□□ -1.32
BUD28YLR062C AUS1Q08409 1394 aa6.79□□□□□ -1.32
BUD28YLR062C SLX5P32828 619 aaKnown RBP6.78□□□□□ -1.32
BUD28YLR062C UGA2P38067 497 aa6.78□□□□□ -1.32
BUD28YLR062C ALD2P47771 506 aa6.78□□□□□ -1.32
BUD28YLR062C CTH1P47976 325 aa6.78□□□□□ -1.32
BUD28YLR062C RTF1P53064 558 aa6.78□□□□□ -1.32
BUD28YLR062C SIR4P11978 1358 aa6.78□□□□□ -1.32
BUD28YLR062C BDF1P35817 686 aa6.77□□□□□ -1.33
BUD28YLR062C RCR1P38212 213 aa6.77□□□□□ -1.33
BUD28YLR062C SSA2P10592 639 aaKnown RBP6.76□□□□□ -1.33
BUD28YLR062C MEC3Q02574 474 aa6.76□□□□□ -1.33
BUD28YLR062C FRK1Q03002 865 aaPredicted RBP6.76□□□□□ -1.33
BUD28YLR062C TAP42Q04372 366 aa6.76□□□□□ -1.33
BUD28YLR062C SEC3P33332 1336 aaKnown RBP6.76□□□□□ -1.33
BUD28YLR062C MHP1P43638 1398 aa6.75□□□□□ -1.33
BUD28YLR062C GRX4P32642 244 aa6.75□□□□□ -1.33
BUD28YLR062C ADE16P54113 591 aaKnown RBP6.75□□□□□ -1.33
BUD28YLR062C HIM1Q06674 414 aa6.75□□□□□ -1.33
BUD28YLR062C PSD2P53037 1138 aaKnown RBP6.74□□□□□ -1.33
BUD28YLR062C CST9Q06032 482 aa6.74□□□□□ -1.33
BUD28YLR062C RPO41P13433 1351 aaKnown RBP6.73□□□□□ -1.33
BUD28YLR062C PDS5Q04264 1277 aa6.73□□□□□ -1.33
BUD28YLR062C POL5P39985 1022 aaKnown RBP6.71□□□□□ -1.34
BUD28YLR062C INP54Q08227 384 aaKnown RBP6.7□□□□□ -1.34
BUD28YLR062C SPT7P35177 1332 aa6.7□□□□□ -1.34
BUD28YLR062C ATG13Q06628 738 aa6.69□□□□□ -1.34
BUD28YLR062C MSB4Q12317 492 aa6.69□□□□□ -1.34
BUD28YLR062C KAR2P16474 682 aaKnown RBP6.68□□□□□ -1.34
BUD28YLR062C OSM1P21375 501 aaKnown RBP6.68□□□□□ -1.34
BUD28YLR062C SSA1P10591 642 aaKnown RBP6.67□□□□□ -1.34
BUD28YLR062C MRM1P25270 412 aa6.67□□□□□ -1.34
BUD28YLR062C TIF4632P39936 914 aaKnown RBP6.67□□□□□ -1.34
BUD28YLR062C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
BUD28YLR062C ALD3P54114 506 aa6.67□□□□□ -1.34
BUD28YLR062C GRE2Q12068 342 aaKnown RBP6.66□□□□□ -1.34
BUD28YLR062C UTP10P42945 1769 aaKnown RBP6.65□□□□□ -1.34
BUD28YLR062C RAD4P14736 754 aa6.65□□□□□ -1.34
BUD28YLR062C GRX1P25373 110 aaKnown RBP6.65□□□□□ -1.34
BUD28YLR062C DSD1P53095 428 aa6.65□□□□□ -1.34
BUD28YLR062C NST1P53935 1240 aa6.65□□□□□ -1.34
BUD28YLR062C BUG1Q12191 341 aa6.65□□□□□ -1.34
BUD28YLR062C TRK1P12685 1235 aa6.64□□□□□ -1.35
BUD28YLR062C HSP104P31539 908 aaKnown RBP6.64□□□□□ -1.35
BUD28YLR062C TOS1P38288 455 aa6.64□□□□□ -1.35
BUD28YLR062C CTF4Q01454 927 aa6.64□□□□□ -1.35
BUD28YLR062C NUP145P49687 1317 aa6.64□□□□□ -1.35
BUD28YLR062C YBP2P53169 641 aa6.63□□□□□ -1.35
BUD28YLR062C UTP22P53254 1237 aaPredicted RBP6.63□□□□□ -1.35
BUD28YLR062C TUM1Q08686 304 aaKnown RBP6.63□□□□□ -1.35
BUD28YLR062C AKL1P38080 1108 aaKnown RBP6.62□□□□□ -1.35
BUD28YLR062C DMA1P38823 416 aa6.62□□□□□ -1.35
BUD28YLR062C PAP2P53632 584 aaKnown RBP6.62□□□□□ -1.35
BUD28YLR062C TOM1Q03280 3268 aa6.61□□□□□ -1.35
BUD28YLR062C EAF6P47128 113 aa6.6□□□□□ -1.35
BUD28YLR062C SAP155P43612 1002 aa6.59□□□□□ -1.35
BUD28YLR062C AOS1Q06624 347 aa6.59□□□□□ -1.35
BUD28YLR062C RIX7Q07844 837 aaKnown RBP6.58□□□□□ -1.36
BUD28YLR062C NTH2P35172 780 aa6.57□□□□□ -1.36
BUD28YLR062C RRP46P53256 223 aaPredicted RBP6.57□□□□□ -1.36
BUD28YLR062C HPC2Q01448 625 aa6.57□□□□□ -1.36
BUD28YLR062C RMT2Q03305 412 aa6.57□□□□□ -1.36
BUD28YLR062C NYV1Q12255 253 aa6.57□□□□□ -1.36
BUD28YLR062C KCC4P25389 1037 aa6.56□□□□□ -1.36
BUD28YLR062C TGL3P40308 642 aa6.56□□□□□ -1.36
BUD28YLR062C MSN5P52918 1224 aa6.56□□□□□ -1.36
BUD28YLR062C ALE1Q08548 619 aa6.55□□□□□ -1.36
BUD28YLR062C PMD1P32634 1753 aa6.54□□□□□ -1.36
BUD28YLR062C BUD27P43573 796 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
BUD28YLR062C TEA1P47988 759 aa6.54□□□□□ -1.36
BUD28YLR062C NOP53Q12080 455 aaKnown RBP6.54□□□□□ -1.36
BUD28YLR062C CTT1P06115 562 aa6.53□□□□□ -1.36
BUD28YLR062C YKL222CP35995 705 aa6.53□□□□□ -1.36
BUD28YLR062C ERT1P38140 529 aa6.53□□□□□ -1.36
BUD28YLR062C MDG1P53885 366 aa6.53□□□□□ -1.36
BUD28YLR062C KIN4Q01919 800 aa6.53□□□□□ -1.36
BUD28YLR062C CTI6Q08923 506 aa6.53□□□□□ -1.36
BUD28YLR062C PHM7Q12252 991 aa6.53□□□□□ -1.36
BUD28YLR062C UGA3P26370 528 aa6.52□□□□□ -1.37
BUD28YLR062C RRT14P40470 206 aa6.52□□□□□ -1.37
BUD28YLR062C YNL050CP53952 270 aa6.52□□□□□ -1.37
BUD28YLR062C IOC4Q04213 475 aa6.52□□□□□ -1.37
BUD28YLR062C YER156CP40093 338 aaKnown RBP6.51□□□□□ -1.37
BUD28YLR062C CWH41P53008 833 aa6.51□□□□□ -1.37
BUD28YLR062C LPD1P09624 499 aaKnown RBP6.5□□□□□ -1.37
BUD28YLR062C PRD1P25375 712 aa6.5□□□□□ -1.37
BUD28YLR062C SER1P33330 395 aaKnown RBP6.5□□□□□ -1.37
BUD28YLR062C RTR1P40084 226 aaPredicted RBP6.5□□□□□ -1.37
BUD28YLR062C YFR016CP43597 1233 aaKnown RBP6.5□□□□□ -1.37
BUD28YLR062C FAS2P19097 1887 aaKnown RBP6.49□□□□□ -1.37
BUD28YLR062C LYS2P07702 1392 aa6.49□□□□□ -1.37
BUD28YLR062C PFF1P38244 976 aa6.49□□□□□ -1.37
BUD28YLR062C YGL082WP53155 381 aa6.49□□□□□ -1.37
BUD28YLR062C NSE3Q05541 303 aa6.49□□□□□ -1.37
BUD28YLR062C SSP2Q08646 371 aa6.49□□□□□ -1.37
BUD28YLR062C ARG8P18544 423 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms